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The map label for this gene is gatC

Identifier: 15594688

GI number: 15594688

Start: 351056

End: 351331

Strand: Reverse

Name: gatC

Synonym: BB0343

Alternate gene names: 15594688

Gene position: 351331-351056 (Counterclockwise)

Preceding gene: 15594689

Following gene: 15594687

Centisome position: 38.58

GC content: 23.55

Gene sequence:

>276_bases
TTGAAAGATATACATTTAAAAAATAGCTTAAAATTAAGCTTAGTGACACTTAGTAGAGAGAGTGAAGATAAATTTATTTC
AAAATTTGAGAAAGTTATTAAATTGGTTAATAAAATTTCAAATTTTGAGGTTCAAATTAATTTTAATGCTAATAAGAAAA
AGATTTCTACGTTGCGCGAGGATAAAGTAGAATTTTCTCTTTCTATTGAAGCAATTAAAAAACTTAGTAATTCGTTTTTA
GATGGATATTTTTCATCTCCTAAAATATTGGAGTAA

Upstream 100 bases:

>100_bases
AAGCAACTTGCAGTTTGTTAAAATTAGTTTGAGAAATGGTAAGAAAGCTATTTTGAGTCCTGAGTATATTAAAAAAATTG
TCAAAGTTTAGAGGTTTATT

Downstream 100 bases:

>100_bases
GGATAAGGTGTTGGACTTAAGTAATTTAACTTTAACCAAAATTCAAGAATTAGTTTTAACTAGAAAATGTAAAATTTATG
ATATTTTGCTTGCTTATAAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKDIHLKNSLKLSLVTLSRESEDKFISKFEKVIKLVNKISNFEVQINFNANKKKISTLREDKVEFSLSIEAIKKLSNSFL
DGYFSSPKILE

Sequences:

>Translated_91_residues
MKDIHLKNSLKLSLVTLSRESEDKFISKFEKVIKLVNKISNFEVQINFNANKKKISTLREDKVEFSLSIEAIKKLSNSFL
DGYFSSPKILE
>Mature_91_residues
MKDIHLKNSLKLSLVTLSRESEDKFISKFEKVIKLVNKISNFEVQINFNANKKKISTLREDKVEFSLSIEAIKKLSNSFL
DGYFSSPKILE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_BORBU (O51318)

Other databases:

- EMBL:   AE000783
- PIR:   F70142
- RefSeq:   NP_212477.1
- EnsemblBacteria:   EBBORT00000008777
- GeneID:   1195180
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0343
- NMPDR:   fig|224326.1.peg.727
- TIGR:   BB_0343
- GeneTree:   EBGT00050000007139
- HOGENOM:   HBG354812
- OMA:   IHLENSL
- ProtClustDB:   PRK00034
- BioCyc:   BBUR224326:BB_0343-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10524; Mature: 10524

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIHLKNSLKLSLVTLSRESEDKFISKFEKVIKLVNKISNFEVQINFNANKKKISTLRE
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHH
DKVEFSLSIEAIKKLSNSFLDGYFSSPKILE
HHHHHEEEHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKDIHLKNSLKLSLVTLSRESEDKFISKFEKVIKLVNKISNFEVQINFNANKKKISTLRE
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHH
DKVEFSLSIEAIKKLSNSFLDGYFSSPKILE
HHHHHEEEHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685