| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
Click here to switch to the map view.
The map label for this gene is mutSB
Identifier: 154686993
GI number: 154686993
Start: 2684912
End: 2687269
Strand: Reverse
Name: mutSB
Synonym: RBAM_025650
Alternate gene names: 154686993
Gene position: 2687269-2684912 (Counterclockwise)
Preceding gene: 154686994
Following gene: 154686992
Centisome position: 68.58
GC content: 49.45
Gene sequence:
>2358_bases GTGCAGCAAAAAGTGTTATCATCACTTGAATTTCATAAAGTAAAAGAACAGATTACCGCACATGCCGCCTCATCGCTCGG CCGGGAGAAGCTTCTGCAGCTGAAACCTTTGACGGATCTCTCAGACATCCAAAAACAGCTGGATGAAGTCGAAGAAGCAT CCGCGGTCATGCGCTTGAGAGGCCATGCTCCGTTCGGCGGCCTGACCGACATAAGATCCGCTTTACGGCGGGCGGAAATC GGCAGTGTGCTGACGCCGGCGGAATTTACCGAATTGTCCGGGCTGCTGTATGCCGTTAAACAAATGAAGCATTTTATCAG CCAAATGACAGAAGACGGCGTCGGCATTCCGCTGATACAGGCCCATGCAGAAGAGCTGATTACATTAGGCGATTTGGAAA GGGAGATTAACTCCTGCATTGATGACCATGGGGAAGTGCTTGATCATGCGTCTCCCGCTTTAAGGGGAATCCGCACGCAG CTCAGGACGCTTGAATCAAGAGTCAGAGACCGGCTTGAATCAATGCTGCGTTCATCTTCCGCTTCTAAAATGCTGTCTGA CACCATCGTTACGATTCGGAATGACCGCTTTGTCATCCCGGTCAAACAGGAATACAGATCAAGCTACGGCGGAATTGTCC ACGATACATCTTCATCCGGTGCGACACTGTTTATTGAACCGCAGGCGATCGTAGATATGAACAACTCGCTTCAGCAGGCG AAAGTAAAAGAAAAACAGGAAATCGAACGGATTCTCCGAATGCTGACGGAGCATACGGCTGAACACACACAAGAAATCGC TCAAGATGTGGAAGTGCTGCAGACACTGGATTTCATTTTCGCCAAAGCGAGATACGCAAAAGCGATGAAGGCGACAAAAC CACTCATGAACGGAGACGGTTTTATCCGGCTGAAAAAAGCGCGCCATCCGCTGCTGCCCCAAGATCAAGTCGTGGCCAAC GATATTGAACTGGGCGGAGATTACTCAACGATCGTTATCACAGGACCGAATACGGGCGGTAAAACCGTTACGTTAAAAAC ACTCGGGCTGCTGACGATAATGGCGCAGGCGGGATTGCACATACCGGCTGATGAGGGATCGGAAGCAGCCGTATTTGACA ATGTGTTTGCCGATATCGGCGATGAACAGTCGATCGAACAAAGTCTGAGTACGTTCTCATCCCACATGGTCAATATCGTC AATATTTTAAAAGACGTGTCTGAAAACAGTCTTGTGCTGTTTGATGAACTCGGTGCCGGAACAGATCCGCAGGAAGGAGC GGCGCTTGCCATGAGCATCCTTGACGAAGTTCACCGGACAAACGCCAGAGTGCTTGCGACAACCCATTATCCGGAACTGA AAGCATACGGATATAACAGACAAGGCGTCATGAATGCCAGCGTTGAATTTGACATTGAAACGCTTTCGCCTACCTATAAG CTTCTGATCGGAGTGCCGGGCCGAAGCAACGCATTTGAAATCTCAAGACGCCTTGGGCTTCCGGAGCATATCATCGGCCA GGCGAAGTCAGAAATGACCGCCGAACATAACGAAGTCGATCTGATGATCGCATCGCTTGAAAAAAGCAAAAAAAGAGCGG ATGAAGAGCTTTCTGAAACCGAATCAATCAGAAAAGAAGCAGAAAAACTGCACAAAGATCTTCAGCAGCAAATCATTGAG CTGAACGCCCAAAAAGATAAAATGATGGAAGAAGCCGAACAGAAAGCTGCGGAAAAACTGGAAGCCGCCGCAAATGAAGC CGAACAGATCATCCGCGAGCTCAGGTCCATCAAGCAAGAACACAGATCCTTTAAGGAACACGAGCTGATTGACGCCAAAA AACGTCTCGGAGACGCGATGCCGGCTTTTGAAAAATCAAAGCAGCCGGAAAGAAAAACAGAGAAAAAACGCGAGCTGAAG CCGGGCGACGAAGTAAAGGTGCTCACATTCGGACAAAAAGGGGCGCTGCTTGAGAAAACCGGCGAGAAAGAATGGAACGT CCAAATCGGCATCCTCAAAATGAAGGTGAAGGAAAAAGATCTTGAGTTTCTCAAGTCCGCTCCTGAACCGAAAAAAGAAA AAGCAATCACCGCCGTAAAAGGGAAGGATTATCACGTATCCCTTGAACTTGACCTCAGGGGAGAGCGTTACGAAAACGCC CTCAGCCGCGTCGAAAAATATTTAGATGACGCGGTGCTTGCCGGCCATCCGAGAGTGTCCATCATTCACGGAAAAGGCAC GGGCGCCCTCCGAAAAGGGGTGCAGGATCTTCTGAAAAACCACCGCAGCGTGAAAAGCTCGCGGTTCGGGGAAGCGGGAG AAGGAGGATCAGGCGTAACGATTGTCGAACTAAAATAA
Upstream 100 bases:
>100_bases AAGGCTGGACGGAAACAAAACATGTGTTAAACGCCCGGCCGCTACACGAGGTCAAAGCATTTCTGACGCGCAATGATTAA GTAAGGAGGATCACAAAACC
Downstream 100 bases:
>100_bases AAAGGGAGTAAACGTCATGAATGCTTTTTGGGAAAATGAGCTTGTTGAAATCGCGGCTTATTACAGTGTAGCCGTCTTGT GTCTCGTCATTTTTCTGACC
Product: recombination and DNA strand exchange inhibitor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 785; Mature: 785
Protein sequence:
>785_residues MQQKVLSSLEFHKVKEQITAHAASSLGREKLLQLKPLTDLSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEI GSVLTPAEFTELSGLLYAVKQMKHFISQMTEDGVGIPLIQAHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQ LRTLESRVRDRLESMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQA KVKEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATKPLMNGDGFIRLKKARHPLLPQDQVVAN DIELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIV NILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYK LLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKDLQQQIIE LNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTEKKRELK PGDEVKVLTFGQKGALLEKTGEKEWNVQIGILKMKVKEKDLEFLKSAPEPKKEKAITAVKGKDYHVSLELDLRGERYENA LSRVEKYLDDAVLAGHPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK
Sequences:
>Translated_785_residues MQQKVLSSLEFHKVKEQITAHAASSLGREKLLQLKPLTDLSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEI GSVLTPAEFTELSGLLYAVKQMKHFISQMTEDGVGIPLIQAHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQ LRTLESRVRDRLESMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQA KVKEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATKPLMNGDGFIRLKKARHPLLPQDQVVAN DIELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIV NILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYK LLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKDLQQQIIE LNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTEKKRELK PGDEVKVLTFGQKGALLEKTGEKEWNVQIGILKMKVKEKDLEFLKSAPEPKKEKAITAVKGKDYHVSLELDLRGERYENA LSRVEKYLDDAVLAGHPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK >Mature_785_residues MQQKVLSSLEFHKVKEQITAHAASSLGREKLLQLKPLTDLSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEI GSVLTPAEFTELSGLLYAVKQMKHFISQMTEDGVGIPLIQAHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQ LRTLESRVRDRLESMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQA KVKEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATKPLMNGDGFIRLKKARHPLLPQDQVVAN DIELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIV NILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYK LLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKDLQQQIIE LNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTEKKRELK PGDEVKVLTFGQKGALLEKTGEKEWNVQIGILKMKVKEKDLEFLKSAPEPKKEKAITAVKGKDYHVSLELDLRGERYENA LSRVEKYLDDAVLAGHPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK
Specific function: This Protein Is Involved In The Repair Of Mismatches In DNA. It Is Possible That It Carries Out The Mismatch Recognition Step. This Protein Has A Weak Atpase Activity. [C]
COG id: COG1193
COG function: function code L; Mismatch repair ATPase (MutS family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Smr domain
Homologues:
Organism=Homo sapiens, GI284813531, Length=544, Percent_Identity=26.2867647058824, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI4504191, Length=298, Percent_Identity=30.2013422818792, Blast_Score=126, Evalue=6e-29, Organism=Homo sapiens, GI4557761, Length=289, Percent_Identity=29.0657439446367, Blast_Score=109, Evalue=9e-24, Organism=Homo sapiens, GI36949366, Length=536, Percent_Identity=24.4402985074627, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI26638666, Length=245, Percent_Identity=31.4285714285714, Blast_Score=103, Evalue=9e-22, Organism=Homo sapiens, GI4505253, Length=245, Percent_Identity=31.4285714285714, Blast_Score=103, Evalue=9e-22, Organism=Homo sapiens, GI26638664, Length=249, Percent_Identity=31.3253012048193, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI262231786, Length=164, Percent_Identity=37.1951219512195, Blast_Score=93, Evalue=8e-19, Organism=Escherichia coli, GI1789089, Length=277, Percent_Identity=28.8808664259928, Blast_Score=117, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17508445, Length=409, Percent_Identity=26.161369193154, Blast_Score=112, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17534743, Length=247, Percent_Identity=30.3643724696356, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17508447, Length=265, Percent_Identity=25.2830188679245, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17539736, Length=261, Percent_Identity=22.6053639846743, Blast_Score=71, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324482, Length=387, Percent_Identity=29.1989664082687, Blast_Score=119, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6319935, Length=269, Percent_Identity=32.3420074349442, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6321912, Length=319, Percent_Identity=25.3918495297806, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321109, Length=202, Percent_Identity=31.6831683168317, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6320302, Length=296, Percent_Identity=26.0135135135135, Blast_Score=84, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6320047, Length=125, Percent_Identity=33.6, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24664545, Length=288, Percent_Identity=31.25, Blast_Score=130, Evalue=5e-30, Organism=Drosophila melanogaster, GI24584320, Length=249, Percent_Identity=28.9156626506024, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTS2_BACA2 (A7Z7E7)
Other databases:
- EMBL: CP000560 - RefSeq: YP_001422154.1 - ProteinModelPortal: A7Z7E7 - SMR: A7Z7E7 - STRING: A7Z7E7 - EnsemblBacteria: EBBACT00000005896 - GeneID: 5461041 - GenomeReviews: CP000560_GR - KEGG: bay:RBAM_025650 - eggNOG: COG1193 - GeneTree: EBGT00050000000349 - HOGENOM: HBG486560 - OMA: PGLVHDQ - ProtClustDB: PRK00409 - BioCyc: BAMY326423:RBAM_025650-MONOMER - HAMAP: MF_00092 - InterPro: IPR005747 - InterPro: IPR000432 - InterPro: IPR007696 - InterPro: IPR002625 - PANTHER: PTHR11361 - PIRSF: PIRSF005814 - SMART: SM00534 - SMART: SM00533 - SMART: SM00463 - TIGRFAMs: TIGR01069
Pfam domain/function: PF00488 MutS_V; PF01713 Smr; SSF48334 DNA_repair_MutS_domIII
EC number: NA
Molecular weight: Translated: 87235; Mature: 87235
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00486 DNA_MISMATCH_REPAIR_2; PS50828 SMR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQKVLSSLEFHKVKEQITAHAASSLGREKLLQLKPLTDLSDIQKQLDEVEEASAVMRLR CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMKHFISQMTEDGVGIPLIQ CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQLRTLESRVRDRLESMLRSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQA HHHHHHHHHEEEECCEEEEECHHHHHHHCCCEEEECCCCCCEEEECCHHHHCCCCHHHHH KVKEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATKPLMNGDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FIRLKKARHPLLPQDQVVANDIELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLH EEEEECCCCCCCCCCCHHHHHHEECCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCC IPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAG CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC TDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYK CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCEECCEEEEEHHCCCCEE LLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSET EEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ESIRKEAEKLHKDLQQQIIELNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTEKKRELKPGDEVKVLTFGQKGALLEKT HHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHC GEKEWNVQIGILKMKVKEKDLEFLKSAPEPKKEKAITAVKGKDYHVSLELDLRGERYENA CCCCCEEEEEEEEEEHHHHHHHHHHCCCCCCHHHCEEEECCCCEEEEEEEECCCHHHHHH LSRVEKYLDDAVLAGHPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVT HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE IVELK EEEEC >Mature Secondary Structure MQQKVLSSLEFHKVKEQITAHAASSLGREKLLQLKPLTDLSDIQKQLDEVEEASAVMRLR CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMKHFISQMTEDGVGIPLIQ CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQLRTLESRVRDRLESMLRSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQA HHHHHHHHHEEEECCEEEEECHHHHHHHCCCEEEECCCCCCEEEECCHHHHCCCCHHHHH KVKEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATKPLMNGDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FIRLKKARHPLLPQDQVVANDIELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLH EEEEECCCCCCCCCCCHHHHHHEECCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCC IPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVSENSLVLFDELGAG CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC TDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYK CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCEECCEEEEEHHCCCCEE LLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSET EEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ESIRKEAEKLHKDLQQQIIELNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTEKKRELKPGDEVKVLTFGQKGALLEKT HHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHC GEKEWNVQIGILKMKVKEKDLEFLKSAPEPKKEKAITAVKGKDYHVSLELDLRGERYENA CCCCCEEEEEEEEEEHHHHHHHHHHCCCCCCHHHCEEEECCCCEEEEEEEECCCHHHHHH LSRVEKYLDDAVLAGHPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVT HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE IVELK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA