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The map label for this gene is yshE [H]

Identifier: 154686992

GI number: 154686992

Start: 2684491

End: 2684895

Strand: Reverse

Name: yshE [H]

Synonym: RBAM_025640

Alternate gene names: 154686992

Gene position: 2684895-2684491 (Counterclockwise)

Preceding gene: 154686993

Following gene: 154686990

Centisome position: 68.52

GC content: 42.22

Gene sequence:

>405_bases
ATGAATGCTTTTTGGGAAAATGAGCTTGTTGAAATCGCGGCTTATTACAGTGTAGCCGTCTTGTGTCTCGTCATTTTTCT
GACCGTGTTTGAATTGGTGACATCCTATAAAAACTGGGTGGAAATCCAAAAAGGCAATCTTGCGGTGGCAATGGCGACCG
GAGGGAAAATTCTCGGTATCGCAAATGTCTTTCAGCACAGCATCGCCCAGCATAATTCGCTTTTGCAAATGATCGGCTGG
GGCGTATACGGATTTATTATGCTTTTAATCAGCTATTTTATCTTTGAATTTCTGACGCCCCGGTTTAAAATTGATAAAGA
AATTGAAAAAGATAACAGAGCTGTCGGCTTTATTTCATTTGTCATCTCAGTCGGCCTGTCATTTGTGGTGGCCGCCGGGA
TTTAA

Upstream 100 bases:

>100_bases
AAAAACCACCGCAGCGTGAAAAGCTCGCGGTTCGGGGAAGCGGGAGAAGGAGGATCAGGCGTAACGATTGTCGAACTAAA
ATAAAAAGGGAGTAAACGTC

Downstream 100 bases:

>100_bases
GGGGACGGGGAAAAATGGAGAAGCTTGCGAAAGTGCTGCTGTCGGCAGCGGGAATTTTTCTGTTCATCGGACTTATTTAT
CTGGTCATGACATCTTAATA

Product: YshE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNAFWENELVEIAAYYSVAVLCLVIFLTVFELVTSYKNWVEIQKGNLAVAMATGGKILGIANVFQHSIAQHNSLLQMIGW
GVYGFIMLLISYFIFEFLTPRFKIDKEIEKDNRAVGFISFVISVGLSFVVAAGI

Sequences:

>Translated_134_residues
MNAFWENELVEIAAYYSVAVLCLVIFLTVFELVTSYKNWVEIQKGNLAVAMATGGKILGIANVFQHSIAQHNSLLQMIGW
GVYGFIMLLISYFIFEFLTPRFKIDKEIEKDNRAVGFISFVISVGLSFVVAAGI
>Mature_134_residues
MNAFWENELVEIAAYYSVAVLCLVIFLTVFELVTSYKNWVEIQKGNLAVAMATGGKILGIANVFQHSIAQHNSLLQMIGW
GVYGFIMLLISYFIFEFLTPRFKIDKEIEKDNRAVGFISFVISVGLSFVVAAGI

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007140 [H]

Pfam domain/function: PF03994 DUF350 [H]

EC number: NA

Molecular weight: Translated: 14994; Mature: 14994

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFWENELVEIAAYYSVAVLCLVIFLTVFELVTSYKNWVEIQKGNLAVAMATGGKILGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHH
ANVFQHSIAQHNSLLQMIGWGVYGFIMLLISYFIFEFLTPRFKIDKEIEKDNRAVGFISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHH
VISVGLSFVVAAGI
HHHHHHHHHHHCCC
>Mature Secondary Structure
MNAFWENELVEIAAYYSVAVLCLVIFLTVFELVTSYKNWVEIQKGNLAVAMATGGKILGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHH
ANVFQHSIAQHNSLLQMIGWGVYGFIMLLISYFIFEFLTPRFKIDKEIEKDNRAVGFISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHH
VISVGLSFVVAAGI
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]