Click here to switch to the map view.

The map label for this gene is cotD [H]

Identifier: 154686467

GI number: 154686467

Start: 2138017

End: 2138253

Strand: Reverse

Name: cotD [H]

Synonym: RBAM_020350

Alternate gene names: 154686467

Gene position: 2138253-2138017 (Counterclockwise)

Preceding gene: 154686468

Following gene: 154686466

Centisome position: 54.57

GC content: 44.3

Gene sequence:

>237_bases
ATGTTTCATCATCATTGTTGCAGACCAAACGTGATGCCGCCGATTGTCCATCCGACTCATTGCTGTGAACACCATTGTTT
TTCTAACACAGTTGTGCCGCATATTCATCCGCAACATACAACTAACGTAAATCACCACAACTTTGAGCACGTTCATTACT
ATCCGCACACTTTTTCAAATGTTGACCCGACAACTCACCAGCATTTTCAGTGCGGAAGCCCTTGCTGCGATCATTAG

Upstream 100 bases:

>100_bases
TGCTGACGCACTTTTAAATTGGGTGATTGAATTAGAACATGCACCCTCTTTTCTTCATAACCTAACAGTGTAATAAAAGT
TAATGGAGAGGGGATTTAGC

Downstream 100 bases:

>100_bases
TATTGAACGCTTAAGCAAGATCGGTTAGGATATCAGCAAATCAAAATGGGGCCCGATGGGGAGCCCCATTTTTTAAGCAG
GTGATCAATTGAAAGTATTA

Product: CotD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MFHHHCCRPNVMPPIVHPTHCCEHHCFSNTVVPHIHPQHTTNVNHHNFEHVHYYPHTFSNVDPTTHQHFQCGSPCCDH

Sequences:

>Translated_78_residues
MFHHHCCRPNVMPPIVHPTHCCEHHCFSNTVVPHIHPQHTTNVNHHNFEHVHYYPHTFSNVDPTTHQHFQCGSPCCDH
>Mature_78_residues
MFHHHCCRPNVMPPIVHPTHCCEHHCFSNTVVPHIHPQHTTNVNHHNFEHVHYYPHTFSNVDPTTHQHFQCGSPCCDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020108
- ProDom:   PD057197 [H]

Pfam domain/function: PF11122 Spore-coat_CotD [H]

EC number: NA

Molecular weight: Translated: 9170; Mature: 9170

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
12.8 %Cys+Met (Translated Protein)
10.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHHHCCRPNVMPPIVHPTHCCEHHCFSNTVVPHIHPQHTTNVNHHNFEHVHYYPHTFSN
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
VDPTTHQHFQCGSPCCDH
CCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MFHHHCCRPNVMPPIVHPTHCCEHHCFSNTVVPHIHPQHTTNVNHHNFEHVHYYPHTFSN
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
VDPTTHQHFQCGSPCCDH
CCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2821284; 8760912; 9384377; 1691789 [H]