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The map label for this gene is 154686367

Identifier: 154686367

GI number: 154686367

Start: 2053015

End: 2054484

Strand: Reverse

Name: 154686367

Synonym: RBAM_019350

Alternate gene names: NA

Gene position: 2054484-2053015 (Counterclockwise)

Preceding gene: 154686368

Following gene: 154686365

Centisome position: 52.43

GC content: 44.97

Gene sequence:

>1470_bases
ATGTTTTTGAAAAAAGGTCTGCACATGACGCTGGTTTTTCTTATGTTTTTCTTTTTCATATCAAGCAGCATGGAAACCGA
AGTGTATGCGGCTGATCGGAAGGCTTCAGACAAAAACAAAGTAAGGGTGTGGTTCAGTTCTGAAAAAGATCCGGCTTCCC
GTACGTGGTATGACGGGCCGCTAGAAGTGAAATACGCCTTAGACGAACAAACACCGCTTGCATTGACAAAAAAGAAGGCT
TCTGACTCCGCCGCTGTGTATATTGATCCGTCGCGCCGCTATCAAAGTGTGTTAGGTGTAGGATCGTCCCTGGAAGAATC
CACAATCCATAATTTATCAAAAATGACACCCGCAAAAAGAAAAGAAGTGCTGAAAAAACTGGTTGATCCCAAAGATGGTA
TCGGAATGGACGTTATGCGCATAACGATCGGGACATCTGATTTTACGGCACAGGAATTTTATACGTATGACGATATGCCT
GAAGGCCAAACAGATCCTAAGCTCCATCATTTCTCGATTCAAAAGGATATTGATTTACACATTACAGCAACCATCAAGGA
AGCGCTGGCGATAAATCCGGAACTGAAAATCATTGCCTCACCGTGGAGTCCGCCGGCTTGGATGAAAACGAATGAAAACC
TCAAGCGGGGAAAGCTGAAAGATAAATATATCGGCGCACTGGCCGTTTACTTCCGCAAATTTATTGAGGCGTACGAAAAG
CAGGGAATTCCGATTTATGCGATGACCCTTCAAAATGAACCTTTGCTGGAAATCGACTATCCAAGCATGTATATGCCGCC
GTCTCAGCAGCGTAAACTGGCACTGGCCTTAAAAAAAGAAATGAAAAAACATGTAATTGACACGAAAATTTGGATTTATG
ATCACAATGCGAGCGGGGCGTGGAACTATATTCCGCCGATTTTAGATGATAAAAAAGGAAACCGGGCGGCAGACGGCATC
GCTTTTCACGATTATGACGGTGACCTTTCCGTCATGTCAGAAATCGGAAAGAGATATCCTGATAAATCTATTCACTTAAC
GGAGCGGTCTGTCTGGGGGACGGCAGGGGCGGACCGGATCGCGCAGTATTTCCGCAATGGCGCGTCGAGCTACAATGCGT
GGGTGACGATGCTCGACAGTCAAATCAAGACGCATCATTGGATAGGCACCCCAGACCCAACGCTGTTTATTCAGGATGCT
AAAAACCCTGACCGCTATTGGAATATCCCGATCTTTCATATGACAGGCAACTTTTCAAAATTTATCGAACGGGGAGCAAA
GCGGATAGAAAGTAATTACGGCTCCAAAAACACAGTCTCGAATGTATCGTTCCTTAATCCTGATCAATCCATTGTGACAG
TCATAATCAACCAGACATCCGCCGATCAAAAATTCCATGTCGTTTCAGAAAATCGGCAGTTTGAAGCTGTCATCCCGGCT
AAAACCGTGGCTACCTACAAATGGAAGTGA

Upstream 100 bases:

>100_bases
TCAGTAATTTTGAAAGCGTATTCATTTAAGCGGGAAGGAGGTGACTGTCCGGCTTTTCATTTAGAATCGCTTATAAAAAT
AATGAAAGGGATGGTGGTTC

Downstream 100 bases:

>100_bases
AAAAAGTAAAAAACCGGCACATTTACGTGCCGGCTTCTTTCTGTTAAGCGCCTTTTTGGTTCAGTTGATCAGAAGGCGCT
TTATTGAATAAACCGTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glucan Endo-1 6-Beta-Glucosidase; Glycoside Hydrolase Family; O-Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; O-Glycosyl Hydrolase; Glycosyl Hydrolase; Ricin B Lectin; O-Glycosyl Hydrolase Family Protein; Glycoside Hydrolase; Lysosomal Glucosyl Ceramidase-Like Protein; Glycosy Hydrolase Family Protein; Glucan EndO-1 6-Beta-Glucosidase; Helix-Turn-Helix AraC Type; Glycosyl Hydrolase Family; LPXTG-Motif Cell Wall Anchor Domain Protein; Glycosyl Hydrolases Family; Endo-1 6-Beta-D-Glucanase; Cellulosome Protein Dockerin Type I

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MFLKKGLHMTLVFLMFFFFISSSMETEVYAADRKASDKNKVRVWFSSEKDPASRTWYDGPLEVKYALDEQTPLALTKKKA
SDSAAVYIDPSRRYQSVLGVGSSLEESTIHNLSKMTPAKRKEVLKKLVDPKDGIGMDVMRITIGTSDFTAQEFYTYDDMP
EGQTDPKLHHFSIQKDIDLHITATIKEALAINPELKIIASPWSPPAWMKTNENLKRGKLKDKYIGALAVYFRKFIEAYEK
QGIPIYAMTLQNEPLLEIDYPSMYMPPSQQRKLALALKKEMKKHVIDTKIWIYDHNASGAWNYIPPILDDKKGNRAADGI
AFHDYDGDLSVMSEIGKRYPDKSIHLTERSVWGTAGADRIAQYFRNGASSYNAWVTMLDSQIKTHHWIGTPDPTLFIQDA
KNPDRYWNIPIFHMTGNFSKFIERGAKRIESNYGSKNTVSNVSFLNPDQSIVTVIINQTSADQKFHVVSENRQFEAVIPA
KTVATYKWK

Sequences:

>Translated_489_residues
MFLKKGLHMTLVFLMFFFFISSSMETEVYAADRKASDKNKVRVWFSSEKDPASRTWYDGPLEVKYALDEQTPLALTKKKA
SDSAAVYIDPSRRYQSVLGVGSSLEESTIHNLSKMTPAKRKEVLKKLVDPKDGIGMDVMRITIGTSDFTAQEFYTYDDMP
EGQTDPKLHHFSIQKDIDLHITATIKEALAINPELKIIASPWSPPAWMKTNENLKRGKLKDKYIGALAVYFRKFIEAYEK
QGIPIYAMTLQNEPLLEIDYPSMYMPPSQQRKLALALKKEMKKHVIDTKIWIYDHNASGAWNYIPPILDDKKGNRAADGI
AFHDYDGDLSVMSEIGKRYPDKSIHLTERSVWGTAGADRIAQYFRNGASSYNAWVTMLDSQIKTHHWIGTPDPTLFIQDA
KNPDRYWNIPIFHMTGNFSKFIERGAKRIESNYGSKNTVSNVSFLNPDQSIVTVIINQTSADQKFHVVSENRQFEAVIPA
KTVATYKWK
>Mature_489_residues
MFLKKGLHMTLVFLMFFFFISSSMETEVYAADRKASDKNKVRVWFSSEKDPASRTWYDGPLEVKYALDEQTPLALTKKKA
SDSAAVYIDPSRRYQSVLGVGSSLEESTIHNLSKMTPAKRKEVLKKLVDPKDGIGMDVMRITIGTSDFTAQEFYTYDDMP
EGQTDPKLHHFSIQKDIDLHITATIKEALAINPELKIIASPWSPPAWMKTNENLKRGKLKDKYIGALAVYFRKFIEAYEK
QGIPIYAMTLQNEPLLEIDYPSMYMPPSQQRKLALALKKEMKKHVIDTKIWIYDHNASGAWNYIPPILDDKKGNRAADGI
AFHDYDGDLSVMSEIGKRYPDKSIHLTERSVWGTAGADRIAQYFRNGASSYNAWVTMLDSQIKTHHWIGTPDPTLFIQDA
KNPDRYWNIPIFHMTGNFSKFIERGAKRIESNYGSKNTVSNVSFLNPDQSIVTVIINQTSADQKFHVVSENRQFEAVIPA
KTVATYKWK

Specific function: Unknown

COG id: COG5520

COG function: function code M; O-Glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI54607043, Length=445, Percent_Identity=25.6179775280899, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI54607045, Length=445, Percent_Identity=25.6179775280899, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI54607047, Length=445, Percent_Identity=25.6179775280899, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI284807150, Length=445, Percent_Identity=25.6179775280899, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI284807152, Length=400, Percent_Identity=26.25, Blast_Score=123, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI115532470, Length=413, Percent_Identity=28.8135593220339, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI115532472, Length=436, Percent_Identity=27.7522935779816, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17542884, Length=409, Percent_Identity=28.8508557457213, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17539758, Length=450, Percent_Identity=27.3333333333333, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI193204210, Length=399, Percent_Identity=28.8220551378446, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17539756, Length=454, Percent_Identity=25.9911894273128, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI25151335, Length=360, Percent_Identity=26.9444444444444, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21355305, Length=454, Percent_Identity=23.7885462555066, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI161078544, Length=426, Percent_Identity=25.5868544600939, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55829; Mature: 55829

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKKGLHMTLVFLMFFFFISSSMETEVYAADRKASDKNKVRVWFSSEKDPASRTWYDGP
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC
LEVKYALDEQTPLALTKKKASDSAAVYIDPSRRYQSVLGVGSSLEESTIHNLSKMTPAKR
EEEEEEECCCCCCEEEECCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
KEVLKKLVDPKDGIGMDVMRITIGTSDFTAQEFYTYDDMPEGQTDPKLHHFSIQKDIDLH
HHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHEEECCCCCCCCCCCCEEEEEECCCCEEE
ITATIKEALAINPELKIIASPWSPPAWMKTNENLKRGKLKDKYIGALAVYFRKFIEAYEK
EEEEEHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
QGIPIYAMTLQNEPLLEIDYPSMYMPPSQQRKLALALKKEMKKHVIDTKIWIYDHNASGA
CCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
WNYIPPILDDKKGNRAADGIAFHDYDGDLSVMSEIGKRYPDKSIHLTERSVWGTAGADRI
CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHH
AQYFRNGASSYNAWVTMLDSQIKTHHWIGTPDPTLFIQDAKNPDRYWNIPIFHMTGNFSK
HHHHHCCCCCHHHHEEEEHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCHHH
FIERGAKRIESNYGSKNTVSNVSFLNPDQSIVTVIINQTSADQKFHVVSENRQFEAVIPA
HHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEEECCCCCCEEEEECCCCEEEEECCC
KTVATYKWK
CEEEEEECC
>Mature Secondary Structure
MFLKKGLHMTLVFLMFFFFISSSMETEVYAADRKASDKNKVRVWFSSEKDPASRTWYDGP
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC
LEVKYALDEQTPLALTKKKASDSAAVYIDPSRRYQSVLGVGSSLEESTIHNLSKMTPAKR
EEEEEEECCCCCCEEEECCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
KEVLKKLVDPKDGIGMDVMRITIGTSDFTAQEFYTYDDMPEGQTDPKLHHFSIQKDIDLH
HHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHEEECCCCCCCCCCCCEEEEEECCCCEEE
ITATIKEALAINPELKIIASPWSPPAWMKTNENLKRGKLKDKYIGALAVYFRKFIEAYEK
EEEEEHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
QGIPIYAMTLQNEPLLEIDYPSMYMPPSQQRKLALALKKEMKKHVIDTKIWIYDHNASGA
CCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
WNYIPPILDDKKGNRAADGIAFHDYDGDLSVMSEIGKRYPDKSIHLTERSVWGTAGADRI
CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHH
AQYFRNGASSYNAWVTMLDSQIKTHHWIGTPDPTLFIQDAKNPDRYWNIPIFHMTGNFSK
HHHHHCCCCCHHHHEEEEHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCHHH
FIERGAKRIESNYGSKNTVSNVSFLNPDQSIVTVIINQTSADQKFHVVSENRQFEAVIPA
HHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEEECCCCCCEEEEECCCCEEEEECCC
KTVATYKWK
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA