| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is gutR [H]
Identifier: 154685108
GI number: 154685108
Start: 626009
End: 628486
Strand: Reverse
Name: gutR [H]
Synonym: RBAM_006530
Alternate gene names: 154685108
Gene position: 628486-626009 (Counterclockwise)
Preceding gene: 154685117
Following gene: 154685101
Centisome position: 16.04
GC content: 49.52
Gene sequence:
>2478_bases ATGGCTGAACTTGAGAACCGGACACAATTTGCAGAACTGCTGGCACCTGCCGTCAAATCGCTGAAACATCATCCTGATTA TAAAGTCAGAAGGAAAAAGAACGAAAAAACAGGACAGTCTTATATAGATCAAATCGCACTCCGATTAGGCGTTTCCTCTA ACACGATCAAAAGCTGGATCGGACAGATGGGCGCAAACTACATTCCCGGACGAATTGACGACGGAAAGCTGTTCGGCATG ATCTGGATCATTATAGAAAAGACCGACATGGATCCTGAATGGCTGACCGGCCTTCTGGAAAACACCACGATTCCCGTTAT CAAGCCCGCACTGCCCGTTTGGACGGCGTCTTGTCTAAAAAAAGCAAAAATACTCCGGAAAGACAGATCATTCGGAGCGC CGAGTGATGACGATGTTGAAAAAGCAGTAAAGCGGCTGTTTCATGACAGACCAAGCTACGAAACGAATGCGCTTACAAGA AACTCCGTCACGCATAACTTACCGTCACGCCGGACCGGAAACTTTATCGGACGCAACTTTGATATGGAAGCAATCCGGCA ATGGATGCTGTCCCAGTCACCGGTCTGTTTAATCACAGGCTGGGCCGGCATGGGGAAAACAACGATCGCTCTTGAAGCAG CCTACCTTTGTGCCGGCGGTTCACCAGATTGGCCGGCATTCAACAGCATCATCTGGATCAGCGCGGACTGGAAAGGATTG AGCTTCAGCGATTTTTTAAACACGATCGCCTATCAGCTCGGACGCGCAGAACAAATCGACAAATCCATCAACGAAAAACG GTTTGTCGTCCGCAATGCATTAGCCGCTCATTCAAATGAAACACCAGTATTGCTGATCGTTGACGGCATTGATACAGCGG AACGTAACATTCACGAATTTATCATCGGCCTTCCGCAAGGCGTAAAAGTCCTCCTTACGGCACGGGAAAACGTAAAACAG ACATACCGGGACGGCCTCGGGGAACTGGCGGCCATCCAGCTGGGCGGCCTTGAACAAACAGATGCCCTTGAATTTTTCCA TCAAGAAGTGCACCGCTGTCTGCAAACATGCAACCTCCCGCAAAAACGGGAAAAGCTGGAGCAGCTGTTGGAGCTATCAC CTGACCTTAAGAATGAATTCGTCTCGGCAGCCGCCGGCAACCCGAAGGCCATGGCACTGAGCATCGCTTACATGTCAGAC GACGATATCCCCGCTCCCCAGCTCATTCAAGAACTTAAACAAGCAGGCTACTCATTATTGGAATTGTTTGAGGTTCTCTT TGGCCGCACATGGGACAGATGTCATGAAGACACACGAAAACTATGGCAGACGCTTTGCTTTTTCGCTAAGCCCCCTGATG AAAAAAGCTTGGCTCAAGCGGCCGGATTAGACGCCCGGCGGTTTCATTACGCGATTGAGCAAATGCGGTCATATGCTTTA ATACAGCCGGAACGAAGCGCAGGTAGTATTCAATATGCAGCCCATCAAACCGTTGTCGCTTACGGAGAACAGCACTTATC CGAAAATCACGAATTAGCAAAAGAAGCCCGCAGCCGCTGGGCGCATTATTATATTGATTATGCGGAAACCCATTTAAAAC GGGAACGGCCCAATTCTGTCTATTGGAGCTACTTGCTGGGACGGAATTTAGAGCAAATGAAAAAGGAATGGCCGAACATC CTAAAAGTCATCGAATGGTCGGGCGAAACCGGACAACATGACATCCTGATTAAACTCATCATCCGCATCAGCCATTTTCT AAGCAGAATCAACCTGCCCCTGCGAATCGAATACGGATTAAAAGCCGCCGATGCCGCCCGTCAATCAGGCGAACACACGC GGGAAGCTTACTTTCGGATCGACACGGCAGGCTGGGCGCTGATGGAAGTCAACGATTCAGACGGAGCTCTCAGGCAAATA GAAGCCGGCCTGAAGATACTCGAACAATCAGGCGCGCCGGATCACGACGACTTGAAAGTATGGGGAACCGCCCTGCAATC GAGGCTGCTGTTAAAAATCGGAGAACCGGAAAAAGCGGCAGCAATGCTGGACGGAATCAAAGATCAGCCCGTCTCCCCCA TTATCCGGCACAGGGTTCTTCTGGTCCGCGGCGACCTGAGTTTCGCCCGCTCTCACTACGAAGAAGCCATCACATTATAC GAAGCGGCAAACACAACCAGCGCCGCATACGGCGGCGAAAAAACGATAGAAGCCTATTTCAACCTCGGCATGGCTTACGT GAAGTGTGATCAACTCGAAAAAGCGGAAAAAGCCTTTGAACAAATGCTCTATGACAAACATAACGCCAATCAAGTTGAGT TGATCTATTACTATTACGGAATGGCACAGCTCTTGTATCGTAAAGGAGAGAAAACGAAAGCGATGGAATCGAATCAGAAA GCGATGCGTTTGATTGATTCGTGGGAGCCTGGGATTGGGATTCGGGGTGAGGTGGAGCAAATGGATATTCTCATTTAA
Upstream 100 bases:
>100_bases TTTCCTGCTGTATAAAAGGACAGCCGCACTGTACTTTTTATTTTTTCATATACAAAAAACACTGAATTGATAAAATAGTA CTAATAGGAGGTGCAGGCTA
Downstream 100 bases:
>100_bases AAGACAACTACATTTCGGCTAGCGATACGAGCTTTGAAAAACACTCATGACCTTGTTGTTTTTAAAGATAAAAAGGTATC TTTATCAGTACAGTAAATTG
Product: GutR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 825; Mature: 824
Protein sequence:
>825_residues MAELENRTQFAELLAPAVKSLKHHPDYKVRRKKNEKTGQSYIDQIALRLGVSSNTIKSWIGQMGANYIPGRIDDGKLFGM IWIIIEKTDMDPEWLTGLLENTTIPVIKPALPVWTASCLKKAKILRKDRSFGAPSDDDVEKAVKRLFHDRPSYETNALTR NSVTHNLPSRRTGNFIGRNFDMEAIRQWMLSQSPVCLITGWAGMGKTTIALEAAYLCAGGSPDWPAFNSIIWISADWKGL SFSDFLNTIAYQLGRAEQIDKSINEKRFVVRNALAAHSNETPVLLIVDGIDTAERNIHEFIIGLPQGVKVLLTARENVKQ TYRDGLGELAAIQLGGLEQTDALEFFHQEVHRCLQTCNLPQKREKLEQLLELSPDLKNEFVSAAAGNPKAMALSIAYMSD DDIPAPQLIQELKQAGYSLLELFEVLFGRTWDRCHEDTRKLWQTLCFFAKPPDEKSLAQAAGLDARRFHYAIEQMRSYAL IQPERSAGSIQYAAHQTVVAYGEQHLSENHELAKEARSRWAHYYIDYAETHLKRERPNSVYWSYLLGRNLEQMKKEWPNI LKVIEWSGETGQHDILIKLIIRISHFLSRINLPLRIEYGLKAADAARQSGEHTREAYFRIDTAGWALMEVNDSDGALRQI EAGLKILEQSGAPDHDDLKVWGTALQSRLLLKIGEPEKAAAMLDGIKDQPVSPIIRHRVLLVRGDLSFARSHYEEAITLY EAANTTSAAYGGEKTIEAYFNLGMAYVKCDQLEKAEKAFEQMLYDKHNANQVELIYYYYGMAQLLYRKGEKTKAMESNQK AMRLIDSWEPGIGIRGEVEQMDILI
Sequences:
>Translated_825_residues MAELENRTQFAELLAPAVKSLKHHPDYKVRRKKNEKTGQSYIDQIALRLGVSSNTIKSWIGQMGANYIPGRIDDGKLFGM IWIIIEKTDMDPEWLTGLLENTTIPVIKPALPVWTASCLKKAKILRKDRSFGAPSDDDVEKAVKRLFHDRPSYETNALTR NSVTHNLPSRRTGNFIGRNFDMEAIRQWMLSQSPVCLITGWAGMGKTTIALEAAYLCAGGSPDWPAFNSIIWISADWKGL SFSDFLNTIAYQLGRAEQIDKSINEKRFVVRNALAAHSNETPVLLIVDGIDTAERNIHEFIIGLPQGVKVLLTARENVKQ TYRDGLGELAAIQLGGLEQTDALEFFHQEVHRCLQTCNLPQKREKLEQLLELSPDLKNEFVSAAAGNPKAMALSIAYMSD DDIPAPQLIQELKQAGYSLLELFEVLFGRTWDRCHEDTRKLWQTLCFFAKPPDEKSLAQAAGLDARRFHYAIEQMRSYAL IQPERSAGSIQYAAHQTVVAYGEQHLSENHELAKEARSRWAHYYIDYAETHLKRERPNSVYWSYLLGRNLEQMKKEWPNI LKVIEWSGETGQHDILIKLIIRISHFLSRINLPLRIEYGLKAADAARQSGEHTREAYFRIDTAGWALMEVNDSDGALRQI EAGLKILEQSGAPDHDDLKVWGTALQSRLLLKIGEPEKAAAMLDGIKDQPVSPIIRHRVLLVRGDLSFARSHYEEAITLY EAANTTSAAYGGEKTIEAYFNLGMAYVKCDQLEKAEKAFEQMLYDKHNANQVELIYYYYGMAQLLYRKGEKTKAMESNQK AMRLIDSWEPGIGIRGEVEQMDILI >Mature_824_residues AELENRTQFAELLAPAVKSLKHHPDYKVRRKKNEKTGQSYIDQIALRLGVSSNTIKSWIGQMGANYIPGRIDDGKLFGMI WIIIEKTDMDPEWLTGLLENTTIPVIKPALPVWTASCLKKAKILRKDRSFGAPSDDDVEKAVKRLFHDRPSYETNALTRN SVTHNLPSRRTGNFIGRNFDMEAIRQWMLSQSPVCLITGWAGMGKTTIALEAAYLCAGGSPDWPAFNSIIWISADWKGLS FSDFLNTIAYQLGRAEQIDKSINEKRFVVRNALAAHSNETPVLLIVDGIDTAERNIHEFIIGLPQGVKVLLTARENVKQT YRDGLGELAAIQLGGLEQTDALEFFHQEVHRCLQTCNLPQKREKLEQLLELSPDLKNEFVSAAAGNPKAMALSIAYMSDD DIPAPQLIQELKQAGYSLLELFEVLFGRTWDRCHEDTRKLWQTLCFFAKPPDEKSLAQAAGLDARRFHYAIEQMRSYALI QPERSAGSIQYAAHQTVVAYGEQHLSENHELAKEARSRWAHYYIDYAETHLKRERPNSVYWSYLLGRNLEQMKKEWPNIL KVIEWSGETGQHDILIKLIIRISHFLSRINLPLRIEYGLKAADAARQSGEHTREAYFRIDTAGWALMEVNDSDGALRQIE AGLKILEQSGAPDHDDLKVWGTALQSRLLLKIGEPEKAAAMLDGIKDQPVSPIIRHRVLLVRGDLSFARSHYEEAITLYE AANTTSAAYGGEKTIEAYFNLGMAYVKCDQLEKAEKAFEQMLYDKHNANQVELIYYYYGMAQLLYRKGEKTKAMESNQKA MRLIDSWEPGIGIRGEVEQMDILI
Specific function: Activator of the glucitol dehydrogenase gene (gutB) [H]
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR002182 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00931 NB-ARC; PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 93549; Mature: 93418
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELENRTQFAELLAPAVKSLKHHPDYKVRRKKNEKTGQSYIDQIALRLGVSSNTIKSWI CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH GQMGANYIPGRIDDGKLFGMIWIIIEKTDMDPEWLTGLLENTTIPVIKPALPVWTASCLK HHHCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCEECCCHHHHHHHHHH KAKILRKDRSFGAPSDDDVEKAVKRLFHDRPSYETNALTRNSVTHNLPSRRTGNFIGRNF HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DMEAIRQWMLSQSPVCLITGWAGMGKTTIALEAAYLCAGGSPDWPAFNSIIWISADWKGL CHHHHHHHHHCCCCEEEEECCCCCCCHHHEEEEHHEECCCCCCCCCCCCEEEEECCCCCC SFSDFLNTIAYQLGRAEQIDKSINEKRFVVRNALAAHSNETPVLLIVDGIDTAERNIHEF CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH IIGLPQGVKVLLTARENVKQTYRDGLGELAAIQLGGLEQTDALEFFHQEVHRCLQTCNLP HHCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC QKREKLEQLLELSPDLKNEFVSAAAGNPKAMALSIAYMSDDDIPAPQLIQELKQAGYSLL HHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH ELFEVLFGRTWDRCHEDTRKLWQTLCFFAKPPDEKSLAQAAGLDARRFHYAIEQMRSYAL HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHEE IQPERSAGSIQYAAHQTVVAYGEQHLSENHELAKEARSRWAHYYIDYAETHLKRERPNSV ECCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH YWSYLLGRNLEQMKKEWPNILKVIEWSGETGQHDILIKLIIRISHFLSRINLPLRIEYGL HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC KAADAARQSGEHTREAYFRIDTAGWALMEVNDSDGALRQIEAGLKILEQSGAPDHDDLKV CHHHHHHHCCCHHHHHHEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHH WGTALQSRLLLKIGEPEKAAAMLDGIKDQPVSPIIRHRVLLVRGDLSFARSHYEEAITLY HHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCHHHHCEEEEEECCHHHHHHHHHHHHHHH EAANTTSAAYGGEKTIEAYFNLGMAYVKCDQLEKAEKAFEQMLYDKHNANQVELIYYYYG HHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH MAQLLYRKGEKTKAMESNQKAMRLIDSWEPGIGIRGEVEQMDILI HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure AELENRTQFAELLAPAVKSLKHHPDYKVRRKKNEKTGQSYIDQIALRLGVSSNTIKSWI CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH GQMGANYIPGRIDDGKLFGMIWIIIEKTDMDPEWLTGLLENTTIPVIKPALPVWTASCLK HHHCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCEECCCHHHHHHHHHH KAKILRKDRSFGAPSDDDVEKAVKRLFHDRPSYETNALTRNSVTHNLPSRRTGNFIGRNF HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DMEAIRQWMLSQSPVCLITGWAGMGKTTIALEAAYLCAGGSPDWPAFNSIIWISADWKGL CHHHHHHHHHCCCCEEEEECCCCCCCHHHEEEEHHEECCCCCCCCCCCCEEEEECCCCCC SFSDFLNTIAYQLGRAEQIDKSINEKRFVVRNALAAHSNETPVLLIVDGIDTAERNIHEF CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH IIGLPQGVKVLLTARENVKQTYRDGLGELAAIQLGGLEQTDALEFFHQEVHRCLQTCNLP HHCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC QKREKLEQLLELSPDLKNEFVSAAAGNPKAMALSIAYMSDDDIPAPQLIQELKQAGYSLL HHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH ELFEVLFGRTWDRCHEDTRKLWQTLCFFAKPPDEKSLAQAAGLDARRFHYAIEQMRSYAL HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHEE IQPERSAGSIQYAAHQTVVAYGEQHLSENHELAKEARSRWAHYYIDYAETHLKRERPNSV ECCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH YWSYLLGRNLEQMKKEWPNILKVIEWSGETGQHDILIKLIIRISHFLSRINLPLRIEYGL HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC KAADAARQSGEHTREAYFRIDTAGWALMEVNDSDGALRQIEAGLKILEQSGAPDHDDLKV CHHHHHHHCCCHHHHHHEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHH WGTALQSRLLLKIGEPEKAAAMLDGIKDQPVSPIIRHRVLLVRGDLSFARSHYEEAITLY HHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCHHHHCEEEEEECCHHHHHHHHHHHHHHH EAANTTSAAYGGEKTIEAYFNLGMAYVKCDQLEKAEKAFEQMLYDKHNANQVELIYYYYG HHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH MAQLLYRKGEKTKAMESNQKAMRLIDSWEPGIGIRGEVEQMDILI HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8195087; 9455482; 9384377 [H]