Click here to switch to the map view.

The map label for this gene is yrhL [H]

Identifier: 154685117

GI number: 154685117

Start: 636523

End: 638454

Strand: Reverse

Name: yrhL [H]

Synonym: RBAM_006620

Alternate gene names: 154685117

Gene position: 638454-636523 (Counterclockwise)

Preceding gene: 154685118

Following gene: 154685108

Centisome position: 16.29

GC content: 49.69

Gene sequence:

>1932_bases
ATGTCAGACAAGTCACTGCATCACCGCTATATTCCCGGACTGGATGGACTTCGCGCCTTTGCCGTCCTCGCAGTTATCGC
ATATCATCTGAATTTTAACTGGGCCGACGGCGGTTTCATTGGTGTTGATATCTTTTTTGTTTTATCGGGGTATTTAATTA
CATCTATTATATTGCCTGCCCAAGGCAATGCCATCACCCTTGATTTGCGTGATTTTTGGGTGCGCCGGATCAGGCGGCTT
CTGCCGGCGGCTTATCTCATGATTATCACGACGGTCATTTGGGTCGTATTGTTTAACAGCGAGCTCCTGCATACCGTACG
CGGGGATGCGGTCTCCTCACTTTTTTACATAAGCAATTGGTGGTTTATCTTTCATCAGCTTTCTTATTTCGACAGCTTCG
GCTCCCCTTCGCCATTAAAAAACCTTTGGTCGCTGGCGATTGAAGAACAGTTTTATATCATATGGCCCTTCCTGCTTCTT
GCGGGAATGTACATATGTAAAACACGGGCCCGGCTTGCGGCCGCGGTCATGTTTCTCGCGTTATGTTCGGCAGTCGTAAT
GAGTATGATGTATGTGCCCGGCGGAGATCCGAGCCGCGTTTATTACGGGACGGATACCCGCTCATTTGAATTGCTTCTCG
GCTGCGCTTTAGCTTTAGTGTGGCCGATGAAACGATTATCTTCCAAACGGCTGCCGAGCAGCATGAAACACCTGCTTCAC
GGGACGGAGCTTGCCGCTTTTGCCGCGCTGCTGCTTTGCGTCTTTTACACGGATGAATATGAACCCTTCCTGTACAAGGG
CGGCATGCTTTTGATCAGCATCACCGCAGCTGTTCTTGTCGCATGTTTATGCCATCCGAGCAGCTTTTTGGGACATGTTC
TTTCATGGAAGCCGCTTCGGTGGATCGGAACGAGATCATACGGAATCTACCTTTGGCATTACCCGGTTTTCGTACTGAGC
ACACCCGTGCAGGAAATCGGAAATCCGGTTTATTGGCACTGCGCCGTCAGAATCGGCGCCACTTTCATTCTTGCCGAGCT
GTCTTACCATTTCATTGAACAGCCGATCCGCACTGCGGGCTTCCGGCCATTTTTACGCCGCGTGTTTCTGAACCGCTTTC
TGGAATGGAAGACATCCTCTGTCATCAGCAGAATGTCGCTCGGCCTTATTCTTGCCGCCATTCTCGTATTTGCGGGCGGG
CTGTCAGGAATAGCCGAGGAAAAAAAACAGCCGCAATGGACGTACGCGCAAAATGATCAGCAAGAAACCGCCGCCTCTTC
GCACAAGACGGCCGATCACGATCAACCGGCAAAAGAAGATGACATTAAGAAAAAACACAGCGGCGAAAAAACAGACACCG
CGTCAGACAAAAACAAGAAAGAACCAACAGACAAATCAAATACAAAGAAAAACGAAGAGAAAAAGGAACGGTCATCTCAA
AAAACGGCTGATCCAAAACAAACACAGCCTCAGCAAGACGTGCTGGCCATCGGTGATTCGGTGATGCTGGACATTGCGTC
ATACCTGCGGCAGTCCCTCCCTCATGTCACCATCGACGGAAAGGTAGGAAGACAAGTCTCTCAAGCACTCCAGCTCACTT
CGGAATATGCGTCATTTAATCAGCCGAACAAAGCGGTCATCATCGAGTTAGGGACGAACGGCTATTTCACAAACAGCCAA
ATTGAATCACTGATCAGCTCCTTTTCAAAAGCCGATATCTATCTTGTCAACACGCGTGTGCCGCGGCAGTGGGAAAGCAA
AGTAAACGAATCATTGCGCCGGCAGGCCGAGTCTCGCAAAAATGTGACGCTTGTCGATTGGCACGCAAAAGCATTGCAGC
ACCCTGAATACTTCACACCGGACGGCGTCCATCTCATACCTGAGGGGTCTAAAGCGCTGACATCCCTCATCGTTCAAACA
ATGAAATCATGA

Upstream 100 bases:

>100_bases
ATGCGTCTAATTAACGGAACAAATGGAAGACTGTACAGAAATCTGCCATAGCCATCCGCAAAACAGCGAGAATTTCCGCA
CACATTATTGGAGGAATACC

Downstream 100 bases:

>100_bases
CAAAAAAAGAGGCCCCAAAAAGGCCTCTTTTTCGCATATCGTCACGCAAGCTTCTGTCCGCAATTCGGACAAAAATTCGC
GCCTTCCGTTTTCGTTCCGC

Product: YrhL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 642

Protein sequence:

>643_residues
MSDKSLHHRYIPGLDGLRAFAVLAVIAYHLNFNWADGGFIGVDIFFVLSGYLITSIILPAQGNAITLDLRDFWVRRIRRL
LPAAYLMIITTVIWVVLFNSELLHTVRGDAVSSLFYISNWWFIFHQLSYFDSFGSPSPLKNLWSLAIEEQFYIIWPFLLL
AGMYICKTRARLAAAVMFLALCSAVVMSMMYVPGGDPSRVYYGTDTRSFELLLGCALALVWPMKRLSSKRLPSSMKHLLH
GTELAAFAALLLCVFYTDEYEPFLYKGGMLLISITAAVLVACLCHPSSFLGHVLSWKPLRWIGTRSYGIYLWHYPVFVLS
TPVQEIGNPVYWHCAVRIGATFILAELSYHFIEQPIRTAGFRPFLRRVFLNRFLEWKTSSVISRMSLGLILAAILVFAGG
LSGIAEEKKQPQWTYAQNDQQETAASSHKTADHDQPAKEDDIKKKHSGEKTDTASDKNKKEPTDKSNTKKNEEKKERSSQ
KTADPKQTQPQQDVLAIGDSVMLDIASYLRQSLPHVTIDGKVGRQVSQALQLTSEYASFNQPNKAVIIELGTNGYFTNSQ
IESLISSFSKADIYLVNTRVPRQWESKVNESLRRQAESRKNVTLVDWHAKALQHPEYFTPDGVHLIPEGSKALTSLIVQT
MKS

Sequences:

>Translated_643_residues
MSDKSLHHRYIPGLDGLRAFAVLAVIAYHLNFNWADGGFIGVDIFFVLSGYLITSIILPAQGNAITLDLRDFWVRRIRRL
LPAAYLMIITTVIWVVLFNSELLHTVRGDAVSSLFYISNWWFIFHQLSYFDSFGSPSPLKNLWSLAIEEQFYIIWPFLLL
AGMYICKTRARLAAAVMFLALCSAVVMSMMYVPGGDPSRVYYGTDTRSFELLLGCALALVWPMKRLSSKRLPSSMKHLLH
GTELAAFAALLLCVFYTDEYEPFLYKGGMLLISITAAVLVACLCHPSSFLGHVLSWKPLRWIGTRSYGIYLWHYPVFVLS
TPVQEIGNPVYWHCAVRIGATFILAELSYHFIEQPIRTAGFRPFLRRVFLNRFLEWKTSSVISRMSLGLILAAILVFAGG
LSGIAEEKKQPQWTYAQNDQQETAASSHKTADHDQPAKEDDIKKKHSGEKTDTASDKNKKEPTDKSNTKKNEEKKERSSQ
KTADPKQTQPQQDVLAIGDSVMLDIASYLRQSLPHVTIDGKVGRQVSQALQLTSEYASFNQPNKAVIIELGTNGYFTNSQ
IESLISSFSKADIYLVNTRVPRQWESKVNESLRRQAESRKNVTLVDWHAKALQHPEYFTPDGVHLIPEGSKALTSLIVQT
MKS
>Mature_642_residues
SDKSLHHRYIPGLDGLRAFAVLAVIAYHLNFNWADGGFIGVDIFFVLSGYLITSIILPAQGNAITLDLRDFWVRRIRRLL
PAAYLMIITTVIWVVLFNSELLHTVRGDAVSSLFYISNWWFIFHQLSYFDSFGSPSPLKNLWSLAIEEQFYIIWPFLLLA
GMYICKTRARLAAAVMFLALCSAVVMSMMYVPGGDPSRVYYGTDTRSFELLLGCALALVWPMKRLSSKRLPSSMKHLLHG
TELAAFAALLLCVFYTDEYEPFLYKGGMLLISITAAVLVACLCHPSSFLGHVLSWKPLRWIGTRSYGIYLWHYPVFVLST
PVQEIGNPVYWHCAVRIGATFILAELSYHFIEQPIRTAGFRPFLRRVFLNRFLEWKTSSVISRMSLGLILAAILVFAGGL
SGIAEEKKQPQWTYAQNDQQETAASSHKTADHDQPAKEDDIKKKHSGEKTDTASDKNKKEPTDKSNTKKNEEKKERSSQK
TADPKQTQPQQDVLAIGDSVMLDIASYLRQSLPHVTIDGKVGRQVSQALQLTSEYASFNQPNKAVIIELGTNGYFTNSQI
ESLISSFSKADIYLVNTRVPRQWESKVNESLRRQAESRKNVTLVDWHAKALQHPEYFTPDGVHLIPEGSKALTSLIVQTM
KS

Specific function: Unknown

COG id: COG1835

COG function: function code I; Predicted acyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71990417, Length=389, Percent_Identity=28.7917737789203, Blast_Score=108, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI86562056, Length=368, Percent_Identity=28.5326086956522, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17562856, Length=320, Percent_Identity=28.125, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17562866, Length=319, Percent_Identity=28.2131661442006, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17560876, Length=358, Percent_Identity=27.9329608938547, Blast_Score=97, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17543924, Length=319, Percent_Identity=28.2131661442006, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17539118, Length=224, Percent_Identity=26.7857142857143, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71982248, Length=389, Percent_Identity=28.5347043701799, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17507283, Length=323, Percent_Identity=26.0061919504644, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17542538, Length=334, Percent_Identity=24.5508982035928, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17532481, Length=310, Percent_Identity=26.1290322580645, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17507735, Length=324, Percent_Identity=25.9259259259259, Blast_Score=89, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17562864, Length=167, Percent_Identity=33.5329341317365, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193203181, Length=319, Percent_Identity=24.1379310344828, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17507733, Length=323, Percent_Identity=25.6965944272446, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17507287, Length=427, Percent_Identity=23.1850117096019, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17507167, Length=333, Percent_Identity=24.9249249249249, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17559544, Length=353, Percent_Identity=25.4957507082153, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI32567150, Length=179, Percent_Identity=30.1675977653631, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17559158, Length=308, Percent_Identity=24.6753246753247, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17541414, Length=154, Percent_Identity=32.4675324675325, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17509001, Length=314, Percent_Identity=26.1146496815287, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI133903927, Length=317, Percent_Identity=28.7066246056782, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17541412, Length=157, Percent_Identity=31.8471337579618, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193203179, Length=321, Percent_Identity=25.8566978193146, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI212646204, Length=367, Percent_Identity=23.9782016348774, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71984481, Length=178, Percent_Identity=31.4606741573034, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17507299, Length=331, Percent_Identity=25.6797583081571, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17507289, Length=331, Percent_Identity=25.6797583081571, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI212640769, Length=313, Percent_Identity=22.3642172523962, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17506687, Length=357, Percent_Identity=25.4901960784314, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI212642133, Length=365, Percent_Identity=26.8493150684932, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17540232, Length=367, Percent_Identity=25.6130790190736, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71983744, Length=323, Percent_Identity=25.077399380805, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193208811, Length=343, Percent_Identity=23.0320699708455, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656
- InterPro:   IPR013830
- InterPro:   IPR013831 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: NA

Molecular weight: Translated: 72585; Mature: 72453

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKSLHHRYIPGLDGLRAFAVLAVIAYHLNFNWADGGFIGVDIFFVLSGYLITSIILPA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEC
QGNAITLDLRDFWVRRIRRLLPAAYLMIITTVIWVVLFNSELLHTVRGDAVSSLFYISNW
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFIFHQLSYFDSFGSPSPLKNLWSLAIEEQFYIIWPFLLLAGMYICKTRARLAAAVMFLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCSAVVMSMMYVPGGDPSRVYYGTDTRSFELLLGCALALVWPMKRLSSKRLPSSMKHLLH
HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GTELAAFAALLLCVFYTDEYEPFLYKGGMLLISITAAVLVACLCHPSSFLGHVLSWKPLR
CHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
WIGTRSYGIYLWHYPVFVLSTPVQEIGNPVYWHCAVRIGATFILAELSYHFIEQPIRTAG
EEECCCCEEEEEEHHHHHHCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
FRPFLRRVFLNRFLEWKTSSVISRMSLGLILAAILVFAGGLSGIAEEKKQPQWTYAQNDQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCH
QETAASSHKTADHDQPAKEDDIKKKHSGEKTDTASDKNKKEPTDKSNTKKNEEKKERSSQ
HHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
KTADPKQTQPQQDVLAIGDSVMLDIASYLRQSLPHVTIDGKVGRQVSQALQLTSEYASFN
CCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCC
QPNKAVIIELGTNGYFTNSQIESLISSFSKADIYLVNTRVPRQWESKVNESLRRQAESRK
CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC
NVTLVDWHAKALQHPEYFTPDGVHLIPEGSKALTSLIVQTMKS
CCEEEECCHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDKSLHHRYIPGLDGLRAFAVLAVIAYHLNFNWADGGFIGVDIFFVLSGYLITSIILPA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEC
QGNAITLDLRDFWVRRIRRLLPAAYLMIITTVIWVVLFNSELLHTVRGDAVSSLFYISNW
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFIFHQLSYFDSFGSPSPLKNLWSLAIEEQFYIIWPFLLLAGMYICKTRARLAAAVMFLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCSAVVMSMMYVPGGDPSRVYYGTDTRSFELLLGCALALVWPMKRLSSKRLPSSMKHLLH
HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GTELAAFAALLLCVFYTDEYEPFLYKGGMLLISITAAVLVACLCHPSSFLGHVLSWKPLR
CHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
WIGTRSYGIYLWHYPVFVLSTPVQEIGNPVYWHCAVRIGATFILAELSYHFIEQPIRTAG
EEECCCCEEEEEEHHHHHHCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
FRPFLRRVFLNRFLEWKTSSVISRMSLGLILAAILVFAGGLSGIAEEKKQPQWTYAQNDQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCH
QETAASSHKTADHDQPAKEDDIKKKHSGEKTDTASDKNKKEPTDKSNTKKNEEKKERSSQ
HHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
KTADPKQTQPQQDVLAIGDSVMLDIASYLRQSLPHVTIDGKVGRQVSQALQLTSEYASFN
CCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCC
QPNKAVIIELGTNGYFTNSQIESLISSFSKADIYLVNTRVPRQWESKVNESLRRQAESRK
CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC
NVTLVDWHAKALQHPEYFTPDGVHLIPEGSKALTSLIVQTMKS
CCEEEECCHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]