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The map label for this gene is ydhU [H]

Identifier: 154685086

GI number: 154685086

Start: 600089

End: 600943

Strand: Reverse

Name: ydhU [H]

Synonym: RBAM_006240

Alternate gene names: 154685086

Gene position: 600943-600089 (Counterclockwise)

Preceding gene: 154685087

Following gene: 154685085

Centisome position: 15.34

GC content: 48.3

Gene sequence:

>855_bases
ATGTATTATTACAAAGAAGAGCTGATCAATATCATTAAACCGGACAAGCCGGACCCGGCCGCGGCCAAGGTGCTTCAGGA
AATTTTAGGCGGGCACTACGGAGAAATGCGGACGATGATGCAATACTTTTTCCAAAGCTCTAATTTCAGAGGAAAAGAAA
AACAGTTCCGTGACCTGCTTCGCGGTGTATTTTTAGAAGAGATCGCACACGTTGAGCTTGTCCAGCATACGATTAATGCG
CTGCTCGACGAAAGCGGCGCTGAGGGCCCCGGAAATCAGGCAGCAGATCAGGCGCCGCTTGACGAAGCAGTTAAACACGC
CAATCCGCACCATTTTATCATCGGAGCGCAAAGTTCTCTTCCTGTAGACGCCGGCGGCAATCCATGGAACGGGTCTTGGG
TATACAACCACGGGAATCTGATTTCCGATTTATTGGACAATGTCGTGCTGGAATCAACCGGCGTGCTGCAAAAGACACGC
ATTTATGAAATGAGTTCAAATCAGACGTTCAGAGAAACACTCGGATTTCTGATCGTCCGTGACAACGCCCATCAAAATGC
ATTTACAAAAGCGTTGGAAACACTGGGTGTCGAATGGGGCAAATTATTTCCCGTGCCGAATTATGATATTGAAAAATACC
CGGAATGCCGGAAATTCGTTGAGATGGGTTATCATAATACCCAATTTAATTTCAGACTGGATCCGACACGGATCGGAGAA
ATTCTGCAGGGAACGACGCCGAGCCGAAACGGCGGCGAATTAAGTGTGTCCGAGCCTCCTAAAGGTTTCCCCGTGCCGGA
ACTTCCTGAACTTCCGAATGAGCACAGCCCCGGACTGAAAGATATGAACTTGTAA

Upstream 100 bases:

>100_bases
GGACACGCTTTCCGTCCTTTTTTTGATGCCGATACATAAAAACTGACTTTGCAAAGACACTAACAGAAGAACCGAAAACT
TCTTTCAGGGGGCGCTGTTT

Downstream 100 bases:

>100_bases
CAAAAACGCCTGTTTCGGGCGTTTTTTGTTTTTCTGAATATGAGGTTTGAATGTGTGTAAAACGGGGAATATAAGCCGGG
AGATCTTGCCATACGGCCGT

Product: YdhU

Products: NA

Alternate protein names: General stress protein 80; GSP80 [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MYYYKEELINIIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFRGKEKQFRDLLRGVFLEEIAHVELVQHTINA
LLDESGAEGPGNQAADQAPLDEAVKHANPHHFIIGAQSSLPVDAGGNPWNGSWVYNHGNLISDLLDNVVLESTGVLQKTR
IYEMSSNQTFRETLGFLIVRDNAHQNAFTKALETLGVEWGKLFPVPNYDIEKYPECRKFVEMGYHNTQFNFRLDPTRIGE
ILQGTTPSRNGGELSVSEPPKGFPVPELPELPNEHSPGLKDMNL

Sequences:

>Translated_284_residues
MYYYKEELINIIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFRGKEKQFRDLLRGVFLEEIAHVELVQHTINA
LLDESGAEGPGNQAADQAPLDEAVKHANPHHFIIGAQSSLPVDAGGNPWNGSWVYNHGNLISDLLDNVVLESTGVLQKTR
IYEMSSNQTFRETLGFLIVRDNAHQNAFTKALETLGVEWGKLFPVPNYDIEKYPECRKFVEMGYHNTQFNFRLDPTRIGE
ILQGTTPSRNGGELSVSEPPKGFPVPELPELPNEHSPGLKDMNL
>Mature_284_residues
MYYYKEELINIIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFRGKEKQFRDLLRGVFLEEIAHVELVQHTINA
LLDESGAEGPGNQAADQAPLDEAVKHANPHHFIIGAQSSLPVDAGGNPWNGSWVYNHGNLISDLLDNVVLESTGVLQKTR
IYEMSSNQTFRETLGFLIVRDNAHQNAFTKALETLGVEWGKLFPVPNYDIEKYPECRKFVEMGYHNTQFNFRLDPTRIGE
ILQGTTPSRNGGELSVSEPPKGFPVPELPELPNEHSPGLKDMNL

Specific function: Unknown

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 31952; Mature: 31952

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYYKEELINIIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFRGKEKQFRDLL
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RGVFLEEIAHVELVQHTINALLDESGAEGPGNQAADQAPLDEAVKHANPHHFIIGAQSSL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCC
PVDAGGNPWNGSWVYNHGNLISDLLDNVVLESTGVLQKTRIYEMSSNQTFRETLGFLIVR
CCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHEEECCCCCHHHHHHCEEEEE
DNAHQNAFTKALETLGVEWGKLFPVPNYDIEKYPECRKFVEMGYHNTQFNFRLDPTRIGE
CCCCHHHHHHHHHHHCCCHHHCCCCCCCCHHCCHHHHHHHHCCCCCCEEEEEECHHHHHH
ILQGTTPSRNGGELSVSEPPKGFPVPELPELPNEHSPGLKDMNL
HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYYYKEELINIIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFRGKEKQFRDLL
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RGVFLEEIAHVELVQHTINALLDESGAEGPGNQAADQAPLDEAVKHANPHHFIIGAQSSL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCC
PVDAGGNPWNGSWVYNHGNLISDLLDNVVLESTGVLQKTRIYEMSSNQTFRETLGFLIVR
CCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHEEECCCCCHHHHHHCEEEEE
DNAHQNAFTKALETLGVEWGKLFPVPNYDIEKYPECRKFVEMGYHNTQFNFRLDPTRIGE
CCCCHHHHHHHHHHHCCCHHHCCCCCCCCHHCCHHHHHHHHCCCCCCEEEEEECHHHHHH
ILQGTTPSRNGGELSVSEPPKGFPVPELPELPNEHSPGLKDMNL
HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]