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The map label for this gene is yaaH [H]

Identifier: 154684535

GI number: 154684535

Start: 24904

End: 26184

Strand: Reverse

Name: yaaH [H]

Synonym: RBAM_000210

Alternate gene names: 154684535

Gene position: 26184-24904 (Counterclockwise)

Preceding gene: 154684536

Following gene: 154684534

Centisome position: 0.67

GC content: 48.4

Gene sequence:

>1281_bases
GTGAAACGGGGCGACACGCTTTCCGCTATTGCGGCGCGCTACCGGACTGCCGCAAATGTCATTGCGGAAGCAAATAAACT
GCCTAATCCAAATACATTGGTTGTCGGACAAACCCTTGTCATCCCGATTGAGGGTCAATATTACGAAGTGAAACAAGGTG
ATACTCTCGCGGCAATCGCCGGCCGTTTTCATATATCGGCCGCGGAGCTTGCGAGGGTTAACGGAATTCAGCCCGGCACC
ACATTGAGAGCCGGAACCCGCCTTTACATTCCGCAGCAGGCGAATAAGCCCGATATCGAATCAAATGCATATATAGAACC
GCGGGGAACGAGCGTAAGCGCTAATCTCCAACAGGCGGCAAGGGAGGCCTCTCCTTATTTAACATACCTCGGCGCATTCA
GTTTTCAAGTGCAGCGGAACGGGACTTTAAAGGAACCGCCTTTGACCAATTTAAAAAGCATCAGTGACAGGCACAACACC
ACACTGATGATGATCATCACCAACCTTGAAAATGACGCATTCAGCGATGAACTCGGGCGGCTCATCTTGAATGACAATAC
AGTGAAAACAAAACTCTTTCAGGAAATCGTCTCCACGGCTAAAAAGTACGGCTTTCGCGATATTCACTTTGATTTCGAAT
ATTTACGTCCACAGGACAGAGAAGCCTACAATCGTTTTTTACGTGAAGCGAGGACGATTTTTCATCGGGAAGGCTGGAAG
ATTTCAACGGCGCTTGCTCCGAAAACGAGCGCGACTCAGGCCGGCAAATGGTACGAAGCACATGACTATAGGGCACATGG
AGAAATCGTCGACTTTGTCGTGATCATGACATATGAGTGGGGGTACAGCGGAGGCCCGGCTCAGGCCGTATCACCTATCG
GCCCTGTAAGAAATGTCATTGAGTACGCGCTGACGGAAATGCCTTCTTCAAAAATCGTCATGGGCCAGAATATGTACGGC
TATGATTGGACACTGCCTTTTAAACAGGGAACGACAGCCAAAGCCGTCAGTCCTCAGCAGGCAATCGCTCTGGCAGCACG
CCATAAAGTCGACATTCAATATGACGAAACCGCCCAGGCTCCATTCTTCCGATACACGGATGAAAATCAGAGACGGCATG
AAGTATGGTTTGAAGACGCACGATCCATTCAAGCGAAATTCAATTTAATTAAAGAACTTCATTTAAGAGGAATCAGCTAT
TGGAAACTCGGCCTTTCTTTCCCGCAAAACTGGCTTTTGCTCGGCGATCAATTTCATATTGTGAAAGAGACGTTTCGTTA
A

Upstream 100 bases:

>100_bases
AAAAACAAATTACCGCCGAAAAATAAACATGATCAGCCTCCTTTTTTCATATATTTGATAGCGGATATGAAAGGAGGCGT
TTTTCATTCAGATCTATATA

Downstream 100 bases:

>100_bases
TTGGAAGCGTCTTTTTTCATGGGCTTTTCTGAGAGTGTGATACAATATAAAGGCCGGCAGCTGACGGATGTTTGCAGAAT
TAAGGAGGATTTTCAATGAA

Product: YaaH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKRGDTLSAIAARYRTAANVIAEANKLPNPNTLVVGQTLVIPIEGQYYEVKQGDTLAAIAGRFHISAAELARVNGIQPGT
TLRAGTRLYIPQQANKPDIESNAYIEPRGTSVSANLQQAAREASPYLTYLGAFSFQVQRNGTLKEPPLTNLKSISDRHNT
TLMMIITNLENDAFSDELGRLILNDNTVKTKLFQEIVSTAKKYGFRDIHFDFEYLRPQDREAYNRFLREARTIFHREGWK
ISTALAPKTSATQAGKWYEAHDYRAHGEIVDFVVIMTYEWGYSGGPAQAVSPIGPVRNVIEYALTEMPSSKIVMGQNMYG
YDWTLPFKQGTTAKAVSPQQAIALAARHKVDIQYDETAQAPFFRYTDENQRRHEVWFEDARSIQAKFNLIKELHLRGISY
WKLGLSFPQNWLLLGDQFHIVKETFR

Sequences:

>Translated_426_residues
MKRGDTLSAIAARYRTAANVIAEANKLPNPNTLVVGQTLVIPIEGQYYEVKQGDTLAAIAGRFHISAAELARVNGIQPGT
TLRAGTRLYIPQQANKPDIESNAYIEPRGTSVSANLQQAAREASPYLTYLGAFSFQVQRNGTLKEPPLTNLKSISDRHNT
TLMMIITNLENDAFSDELGRLILNDNTVKTKLFQEIVSTAKKYGFRDIHFDFEYLRPQDREAYNRFLREARTIFHREGWK
ISTALAPKTSATQAGKWYEAHDYRAHGEIVDFVVIMTYEWGYSGGPAQAVSPIGPVRNVIEYALTEMPSSKIVMGQNMYG
YDWTLPFKQGTTAKAVSPQQAIALAARHKVDIQYDETAQAPFFRYTDENQRRHEVWFEDARSIQAKFNLIKELHLRGISY
WKLGLSFPQNWLLLGDQFHIVKETFR
>Mature_426_residues
MKRGDTLSAIAARYRTAANVIAEANKLPNPNTLVVGQTLVIPIEGQYYEVKQGDTLAAIAGRFHISAAELARVNGIQPGT
TLRAGTRLYIPQQANKPDIESNAYIEPRGTSVSANLQQAAREASPYLTYLGAFSFQVQRNGTLKEPPLTNLKSISDRHNT
TLMMIITNLENDAFSDELGRLILNDNTVKTKLFQEIVSTAKKYGFRDIHFDFEYLRPQDREAYNRFLREARTIFHREGWK
ISTALAPKTSATQAGKWYEAHDYRAHGEIVDFVVIMTYEWGYSGGPAQAVSPIGPVRNVIEYALTEMPSSKIVMGQNMYG
YDWTLPFKQGTTAKAVSPQQAIALAARHKVDIQYDETAQAPFFRYTDENQRRHEVWFEDARSIQAKFNLIKELHLRGISY
WKLGLSFPQNWLLLGDQFHIVKETFR

Specific function: May be required for the L-alanine-stimulated germination pathway [H]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 48262; Mature: 48262

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGDTLSAIAARYRTAANVIAEANKLPNPNTLVVGQTLVIPIEGQYYEVKQGDTLAAIA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCCCEEEEEH
GRFHISAAELARVNGIQPGTTLRAGTRLYIPQQANKPDIESNAYIEPRGTSVSANLQQAA
HHHEECHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCCCCCEECCCCCEECHHHHHHH
REASPYLTYLGAFSFQVQRNGTLKEPPLTNLKSISDRHNTTLMMIITNLENDAFSDELGR
HHCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHCE
LILNDNTVKTKLFQEIVSTAKKYGFRDIHFDFEYLRPQDREAYNRFLREARTIFHREGWK
EEECCCHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHCCCCE
ISTALAPKTSATQAGKWYEAHDYRAHGEIVDFVVIMTYEWGYSGGPAQAVSPIGPVRNVI
EEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCHHHCCCHHHHHHHH
EYALTEMPSSKIVMGQNMYGYDWTLPFKQGTTAKAVSPQQAIALAARHKVDIQYDETAQA
HHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCCC
PFFRYTDENQRRHEVWFEDARSIQAKFNLIKELHLRGISYWKLGLSFPQNWLLLGDQFHI
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCHH
VKETFR
HHHHCC
>Mature Secondary Structure
MKRGDTLSAIAARYRTAANVIAEANKLPNPNTLVVGQTLVIPIEGQYYEVKQGDTLAAIA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCCCEEEEEH
GRFHISAAELARVNGIQPGTTLRAGTRLYIPQQANKPDIESNAYIEPRGTSVSANLQQAA
HHHEECHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCCCCCEECCCCCEECHHHHHHH
REASPYLTYLGAFSFQVQRNGTLKEPPLTNLKSISDRHNTTLMMIITNLENDAFSDELGR
HHCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHCE
LILNDNTVKTKLFQEIVSTAKKYGFRDIHFDFEYLRPQDREAYNRFLREARTIFHREGWK
EEECCCHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHCCCCE
ISTALAPKTSATQAGKWYEAHDYRAHGEIVDFVVIMTYEWGYSGGPAQAVSPIGPVRNVI
EEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCHHHCCCHHHHHHHH
EYALTEMPSSKIVMGQNMYGYDWTLPFKQGTTAKAVSPQQAIALAARHKVDIQYDETAQA
HHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCCC
PFFRYTDENQRRHEVWFEDARSIQAKFNLIKELHLRGISYWKLGLSFPQNWLLLGDQFHI
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCHH
VKETFR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957 [H]