Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yhjE [H]

Identifier: 154248594

GI number: 154248594

Start: 5177786

End: 5179672

Strand: Direct

Name: yhjE [H]

Synonym: Xaut_4675

Alternate gene names: 154248594

Gene position: 5177786-5179672 (Clockwise)

Preceding gene: 154248591

Following gene: 154248595

Centisome position: 97.53

GC content: 65.98

Gene sequence:

>1887_bases
GTGTGCGGCTGGCATCCACGACCGATACATGTGGGACGCCCATCGCTCAGAGCCCGAACGCTAGTGCGAGTCTGGCCCCT
GGGTCAAACCAGATTTTGCCTTGATCTGGGGCCTCACACCCACCTCCATACTACATATGGTGGCGCCCATCAGGTTATCA
AATCCCTAATGGGCCTTTACCCGGCTCGGTTTTCGCGTCTTCGTGACCGGCCACCCGACGCGGTGCGCGAAGTGGCGATC
ATCACCGTCATCCACAGGCTGGATACAGACGGGTGCGCGGCGGCTCGAACGCAACCAAAGTCCGTTCGGGCGACGGTGTC
ATGCGCATCGCACATGCCCACCATGCAGAATGCGGTATCCGCGTGCGTGGCAAAGCCGTGCGCAATAATCTATCAAGCGG
CCTCTTCCCTCGCGCGCGGGACACTTACGCCTCCCCCGCATCGCGATAGATTATTGCCCAACCCTCCGGCGCCGTGGCGC
CCGTGGAGACCGGGCACGGAGCGAGGCGATCCGGGACAGTTGGAACAGGTCATGTCATCCACCACCGTCGTCGCGTCCGC
CGACGAACATCACGCCGTCAACCCGCGCTCCCGCGTCATCCTGGCGAGCCTCGTTGGCACTACCATCGAGTTCTACGACT
TCTACGTCTATGCCACGGCCGCGGTGCTGGTGTTCCCGCACCTGTTCTTCCCGGCCAGCGATCCGACCACCGCCTTGCTC
GCCTCGTTCGCGGTGTTCGGCGCGGCCATGGTGGCTCGGCCGCTGGGCGCCATCTTCTTCGGCCATCTCGGTGACAAGAA
GGGCCGCAAGATCACGTTGGTGGGCGCCCTCCTGACCATGGGCATCGCCACCTTCCTCATCGGCCTCCTGCCGACCTACG
CCACCGCCGGCTGGCTGGCCCCGGCGCTGCTGGTGGTGCTGCGCCTCGCGCAGGGCTTCGCGCTCGGCGGCGAATGGAGC
GGCGCGGCGCTGGTAGCCACCGAGAACGCCCCTCCCGGCAAGCGCGCGGTCTACGGCACCTTCCCGCAGCTCGGCGCGCC
CATCGGCTTCATCATCGCCAATGGCCTGTTCCTCATCATCGCGGCGCTGATGCCGTCCTCCGATCCCTCGCGGCCGTCCG
ACGCCTTCCTGTCGTGGGGCTGGCGCATCCCGTTCCTGTTCTCGGCGGTGATGGTGATCGTCGGCCTGTGGGTCCGCTTC
AGCCTGGTGGAGAGCAAGGCCTTCGAGAACACGGTGAAGCGGGGCGGGATCCAGAAGGTGCCGCTGACGGCCGCCTTCAA
GACCCACTGGCGCGAGCTGATCCTCGGCACCTTCTACATGCTAGCCACCTACGTGCTGTTTTACCTGATGACCACCTTCT
CGCTGAGCTATGGCCGCGCCGCCACCACGGCCGCACTGCCGGGCCTCGGCTACGACTACCGCACCTTCGTGCTGATGATG
ATCTGCGGCGTGGTGTTCTTCGGCATCTTCACCATGGTGTCCGGCCCCTGGGCCGACCGCTGGGGCCGCCGTCGCACCCT
CATCGCCATCACCTCGGCCATCGCCGTGTTCGGCCTGCTGTGGGTGCCCATCCTGTCCGCCGGCTTCGTGGGCGTCATGG
CGTGGCTCATCATCGGCTTCACGCTGATGGGCCTCACCTTCGGCCCCATGGGCGCGCTGCTGCCGGAGCTGTTCCCGGCC
AACGTGCGCTATACCGGCTCGGGCATCTCCTACAACGTGTCGTCCATCCTCGGCGCAGCGGTGGCCCCGTTCATCGCGGT
GGCGCTGTGGAGCTATGGCGGCGGCAGCCCGTTCTGGGTCGGCGTCTACCTGACCGTGATGGCGCTGTTCACCCTGGTGG
CGCTGATTCTCGGCAAGGAAACCCGCGACATCAACATCCACCACTGA

Upstream 100 bases:

>100_bases
CGGGCCGATCATTCTAAATGATGAATGTGGCAGTCGTGACGATACGTCTGGCACGGCGCAGGACGTCGCGCCGTGACGGT
TCGCAGAACAGGGGTTCTGG

Downstream 100 bases:

>100_bases
GGCGAGGGGGCTCAACGCCCCTCCTTGATCGATGTGGGGGCTTACGCCCCGACTTGATCCGTGTTGCGGGGCTTAACGCC
CCGCCCTGAACCGTGTTGGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MCGWHPRPIHVGRPSLRARTLVRVWPLGQTRFCLDLGPHTHLHTTYGGAHQVIKSLMGLYPARFSRLRDRPPDAVREVAI
ITVIHRLDTDGCAAARTQPKSVRATVSCASHMPTMQNAVSACVAKPCAIIYQAASSLARGTLTPPPHRDRLLPNPPAPWR
PWRPGTERGDPGQLEQVMSSTTVVASADEHHAVNPRSRVILASLVGTTIEFYDFYVYATAAVLVFPHLFFPASDPTTALL
ASFAVFGAAMVARPLGAIFFGHLGDKKGRKITLVGALLTMGIATFLIGLLPTYATAGWLAPALLVVLRLAQGFALGGEWS
GAALVATENAPPGKRAVYGTFPQLGAPIGFIIANGLFLIIAALMPSSDPSRPSDAFLSWGWRIPFLFSAVMVIVGLWVRF
SLVESKAFENTVKRGGIQKVPLTAAFKTHWRELILGTFYMLATYVLFYLMTTFSLSYGRAATTAALPGLGYDYRTFVLMM
ICGVVFFGIFTMVSGPWADRWGRRRTLIAITSAIAVFGLLWVPILSAGFVGVMAWLIIGFTLMGLTFGPMGALLPELFPA
NVRYTGSGISYNVSSILGAAVAPFIAVALWSYGGGSPFWVGVYLTVMALFTLVALILGKETRDINIHH

Sequences:

>Translated_628_residues
MCGWHPRPIHVGRPSLRARTLVRVWPLGQTRFCLDLGPHTHLHTTYGGAHQVIKSLMGLYPARFSRLRDRPPDAVREVAI
ITVIHRLDTDGCAAARTQPKSVRATVSCASHMPTMQNAVSACVAKPCAIIYQAASSLARGTLTPPPHRDRLLPNPPAPWR
PWRPGTERGDPGQLEQVMSSTTVVASADEHHAVNPRSRVILASLVGTTIEFYDFYVYATAAVLVFPHLFFPASDPTTALL
ASFAVFGAAMVARPLGAIFFGHLGDKKGRKITLVGALLTMGIATFLIGLLPTYATAGWLAPALLVVLRLAQGFALGGEWS
GAALVATENAPPGKRAVYGTFPQLGAPIGFIIANGLFLIIAALMPSSDPSRPSDAFLSWGWRIPFLFSAVMVIVGLWVRF
SLVESKAFENTVKRGGIQKVPLTAAFKTHWRELILGTFYMLATYVLFYLMTTFSLSYGRAATTAALPGLGYDYRTFVLMM
ICGVVFFGIFTMVSGPWADRWGRRRTLIAITSAIAVFGLLWVPILSAGFVGVMAWLIIGFTLMGLTFGPMGALLPELFPA
NVRYTGSGISYNVSSILGAAVAPFIAVALWSYGGGSPFWVGVYLTVMALFTLVALILGKETRDINIHH
>Mature_628_residues
MCGWHPRPIHVGRPSLRARTLVRVWPLGQTRFCLDLGPHTHLHTTYGGAHQVIKSLMGLYPARFSRLRDRPPDAVREVAI
ITVIHRLDTDGCAAARTQPKSVRATVSCASHMPTMQNAVSACVAKPCAIIYQAASSLARGTLTPPPHRDRLLPNPPAPWR
PWRPGTERGDPGQLEQVMSSTTVVASADEHHAVNPRSRVILASLVGTTIEFYDFYVYATAAVLVFPHLFFPASDPTTALL
ASFAVFGAAMVARPLGAIFFGHLGDKKGRKITLVGALLTMGIATFLIGLLPTYATAGWLAPALLVVLRLAQGFALGGEWS
GAALVATENAPPGKRAVYGTFPQLGAPIGFIIANGLFLIIAALMPSSDPSRPSDAFLSWGWRIPFLFSAVMVIVGLWVRF
SLVESKAFENTVKRGGIQKVPLTAAFKTHWRELILGTFYMLATYVLFYLMTTFSLSYGRAATTAALPGLGYDYRTFVLMM
ICGVVFFGIFTMVSGPWADRWGRRRTLIAITSAIAVFGLLWVPILSAGFVGVMAWLIIGFTLMGLTFGPMGALLPELFPA
NVRYTGSGISYNVSSILGAAVAPFIAVALWSYGGGSPFWVGVYLTVMALFTLVALILGKETRDINIHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789941, Length=449, Percent_Identity=54.1202672605791, Blast_Score=402, Evalue=1e-113,
Organism=Escherichia coli, GI1788292, Length=460, Percent_Identity=36.5217391304348, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI1790550, Length=437, Percent_Identity=31.5789473684211, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1788942, Length=477, Percent_Identity=31.6561844863732, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI87082404, Length=453, Percent_Identity=24.2825607064018, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 67947; Mature: 67947

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00024 HEMOPEXIN ; PS00359 RIBOSOMAL_L11 ; PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGWHPRPIHVGRPSLRARTLVRVWPLGQTRFCLDLGPHTHLHTTYGGAHQVIKSLMGLY
CCCCCCCCCCCCCCCHHHHHEEEEECCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHH
PARFSRLRDRPPDAVREVAIITVIHRLDTDGCAAARTQPKSVRATVSCASHMPTMQNAVS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCHHHHHHH
ACVAKPCAIIYQAASSLARGTLTPPPHRDRLLPNPPAPWRPWRPGTERGDPGQLEQVMSS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
TTVVASADEHHAVNPRSRVILASLVGTTIEFYDFYVYATAAVLVFPHLFFPASDPTTALL
HHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ASFAVFGAAMVARPLGAIFFGHLGDKKGRKITLVGALLTMGIATFLIGLLPTYATAGWLA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALLVVLRLAQGFALGGEWSGAALVATENAPPGKRAVYGTFPQLGAPIGFIIANGLFLII
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHH
AALMPSSDPSRPSDAFLSWGWRIPFLFSAVMVIVGLWVRFSLVESKAFENTVKRGGIQKV
HHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLTAAFKTHWRELILGTFYMLATYVLFYLMTTFSLSYGRAATTAALPGLGYDYRTFVLMM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHH
ICGVVFFGIFTMVSGPWADRWGRRRTLIAITSAIAVFGLLWVPILSAGFVGVMAWLIIGF
HHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMGLTFGPMGALLPELFPANVRYTGSGISYNVSSILGAAVAPFIAVALWSYGGGSPFWV
HHHHHHHCHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHH
GVYLTVMALFTLVALILGKETRDINIHH
HHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MCGWHPRPIHVGRPSLRARTLVRVWPLGQTRFCLDLGPHTHLHTTYGGAHQVIKSLMGLY
CCCCCCCCCCCCCCCHHHHHEEEEECCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHH
PARFSRLRDRPPDAVREVAIITVIHRLDTDGCAAARTQPKSVRATVSCASHMPTMQNAVS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCHHHHHHH
ACVAKPCAIIYQAASSLARGTLTPPPHRDRLLPNPPAPWRPWRPGTERGDPGQLEQVMSS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
TTVVASADEHHAVNPRSRVILASLVGTTIEFYDFYVYATAAVLVFPHLFFPASDPTTALL
HHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ASFAVFGAAMVARPLGAIFFGHLGDKKGRKITLVGALLTMGIATFLIGLLPTYATAGWLA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALLVVLRLAQGFALGGEWSGAALVATENAPPGKRAVYGTFPQLGAPIGFIIANGLFLII
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHH
AALMPSSDPSRPSDAFLSWGWRIPFLFSAVMVIVGLWVRFSLVESKAFENTVKRGGIQKV
HHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PLTAAFKTHWRELILGTFYMLATYVLFYLMTTFSLSYGRAATTAALPGLGYDYRTFVLMM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHH
ICGVVFFGIFTMVSGPWADRWGRRRTLIAITSAIAVFGLLWVPILSAGFVGVMAWLIIGF
HHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMGLTFGPMGALLPELFPANVRYTGSGISYNVSSILGAAVAPFIAVALWSYGGGSPFWV
HHHHHHHCHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHH
GVYLTVMALFTLVALILGKETRDINIHH
HHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]