Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154248485

Identifier: 154248485

GI number: 154248485

Start: 5045546

End: 5046691

Strand: Direct

Name: 154248485

Synonym: Xaut_4565

Alternate gene names: NA

Gene position: 5045546-5046691 (Clockwise)

Preceding gene: 154248480

Following gene: 154248486

Centisome position: 95.04

GC content: 73.47

Gene sequence:

>1146_bases
ATGACCCAAGCGACTCGTCCGCCGGAGTCCTTCCAGCAGACTGCGCGCTGGCCCGACCGCCGCATCCTCGACCTGTTCGG
CATCGCGCACCCGATCCTGCTGGGACCCATGGCGGGCGCGGGCACACCGAAGCTTGCCATCGCGGTGGGTGAGGGGGGCG
GCCTCGCTTCCCTGCCCGGTGCCATGTACCAGCCGAATGAACTGCGCGCGGCCATCGAAGAGGTGCGCGCCGGGCTTCCC
GGCCGGCCGCTCAACGTCAATTTCTTCTGCCACACTCCGCCCACGCCCGATCCGGTGCGCATGATGGGCTGGCGGACGCG
GCTCGCGCCTTATTATGTGGAGCACGGCCTCGACCCGCAGGCGACGCCGCCGGCCGGCGGGCGCGCGCCGTTCGACGCCA
CCTTGTGCGCCTTGGTGGAGGAGACGCGGCCGGAGGTGGTGAGCTTCCATTTCGGCCTGCCCGATCCGGCGCTGCTGGCG
CGGGTGAAGGCGACGGGGGCCAAGGTGATCTCGTCAGCCTCCACCGTGGCCGAAGCCAGATGGCTGGAAGCGCGCGGCTG
CGACGCCATCATCGCCATGGGGCTGGAAGCGGGCGGCCATCGCGCCACCTTCCTCGGTAACGATGTGGCGGGCGACATGG
CCGGCGACATGAGCCGGCAGGTGGGCACCTTCGCCCTGGTGCCGCAGGTGGCGGATGCGGTGGGCGTGCCGGTGATCGCC
GCCGGCGGCATCGCCGACGCGCGGGGCATCGTCGCGGCGCTGGCGTTGGGCGCTTCCGCGGTGCAGGTGGGCACCGCCTT
CCTGCTGTGCCCGGAAGCGAGGATCCCGGCCGTGCATCGCGCCGCGCTGGAGGCGGCGGGGGACGACAGCACCGCCCTCA
CCAACCTGTTCACCGGCCGCCCGGCGCGCGGCATCATGAACCGGGTGATGCGGGAGGTGGGCCCCCTCTCCGCCGACGCT
CCCGCCTTCCCGCTGGCCGGCGGCGCCCTCGCCCCGCTGCGGGCGGCGGCCGAAGCCGAGGGCCGGGATGACTTCACCAA
CCTGTGGGCCGGGCAGGCCGCGCGCCTCGCCCCCCGCCTGCCCGCCGCCGACCTGACCCGCAAGCTCGCCATCGACGCCC
TCGCCCAGCTAAATCCCTCGGCCTGA

Upstream 100 bases:

>100_bases
CGGATATCCATCATCAGAAGTGAACAGTAATATCAGAATGTTTCAATTTCAATGAAACTCGCATGGGCCATAATGGGCGA
AAGAGCGAAGGAGGCCCGCC

Downstream 100 bases:

>100_bases
ACTGAAGCAGGCACGGTCCTTCGCTCGGCTCTCCTGTGCCCGGTGCGTGATCTTGGCGCTTGGCGCGGCCCGTTCCGCGT
GGTCATCTCCCGCGACCATC

Product: 2-nitropropane dioxygenase NPD

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPGAMYQPNELRAAIEEVRAGLP
GRPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLA
RVKATGAKVISSASTVAEARWLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIA
AGGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGRPARGIMNRVMREVGPLSADA
PAFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRLPAADLTRKLAIDALAQLNPSA

Sequences:

>Translated_381_residues
MTQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPGAMYQPNELRAAIEEVRAGLP
GRPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLA
RVKATGAKVISSASTVAEARWLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIA
AGGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGRPARGIMNRVMREVGPLSADA
PAFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRLPAADLTRKLAIDALAQLNPSA
>Mature_380_residues
TQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPGAMYQPNELRAAIEEVRAGLPG
RPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLAR
VKATGAKVISSASTVAEARWLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIAA
GGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGRPARGIMNRVMREVGPLSADAP
AFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRLPAADLTRKLAIDALAQLNPSA

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=318, Percent_Identity=30.188679245283, Blast_Score=128, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 39404; Mature: 39272

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPG
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC
AMYQPNELRAAIEEVRAGLPGRPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQ
CCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCCC
ATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLARVKATGAKVISSASTVAEAR
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIA
HHHHCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCEEE
AGGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGR
ECCCHHHHHHHHHHHHCHHHHHHCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC
PARGIMNRVMREVGPLSADAPAFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCC
PAADLTRKLAIDALAQLNPSA
CHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQATRPPESFQQTARWPDRRILDLFGIAHPILLGPMAGAGTPKLAIAVGEGGGLASLPG
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC
AMYQPNELRAAIEEVRAGLPGRPLNVNFFCHTPPTPDPVRMMGWRTRLAPYYVEHGLDPQ
CCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCCC
ATPPAGGRAPFDATLCALVEETRPEVVSFHFGLPDPALLARVKATGAKVISSASTVAEAR
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WLEARGCDAIIAMGLEAGGHRATFLGNDVAGDMAGDMSRQVGTFALVPQVADAVGVPVIA
HHHHCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCEEE
AGGIADARGIVAALALGASAVQVGTAFLLCPEARIPAVHRAALEAAGDDSTALTNLFTGR
ECCCHHHHHHHHHHHHCHHHHHHCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC
PARGIMNRVMREVGPLSADAPAFPLAGGALAPLRAAAEAEGRDDFTNLWAGQAARLAPRL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCC
PAADLTRKLAIDALAQLNPSA
CHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA