| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fabZ
Identifier: 154248349
GI number: 154248349
Start: 4913686
End: 4914171
Strand: Reverse
Name: fabZ
Synonym: Xaut_4429
Alternate gene names: 154248349
Gene position: 4914171-4913686 (Counterclockwise)
Preceding gene: 154248350
Following gene: 154248348
Centisome position: 92.56
GC content: 62.96
Gene sequence:
>486_bases ATGAACGATACGACGCATGCCGCCGAAGGTGCGGAGCCGAAGGTGCTCGCCAGCGCTGACATCCTGAAGGTGCTCACCTG TCTGCCCCACCGCTATCCGTTCCTCATGGTGGACCGCGTGGAGCAGATCGACGGCGACCTTTCCTGCGTCGGCATCAAGA ATGTGACCGCTAACGAGCCGCACTTCCAGGGCCATTTCCCCGGCAACCCGGTGATGCCGGGAGTGCTCATCATCGAGGGC ATGGCGCAGACCGCCGGTGTCGTCTGTGTGCTCGGCAAGGACAAGGAAAAGCCGTCCCTGGTCTATTTCATGACCATCGA CGAGGCGAAGTTCCGCCGTCCGGTCGTGCCAGGCGACGTGCTTGAATATCACATGACGCGCATCTCCCGCCGCCGCAACA TGTGGTGGTACCGCGGCGAGGCCAAGGTGCGCGGCGAGATCGTCGCGCAGGCCAAGGTGGGCGCCATGATCATGGAGAAC AGCTAG
Upstream 100 bases:
>100_bases CGGTGCGCGAATGGTTCCGCGAGGTAACGACCCTCAAGCGCCTCGCCGCGGCCAGCGCCCGGCGCGGCGGCAATGACGGG GAAGGGGAAGGATCGGGGGA
Downstream 100 bases:
>100_bases TGGCGAAGATCGACCCCACCGCTCGGGTGGAGAACCCGGCGGGGCTCGCGGATGACGTGGAGATCGGCCCCTATACAGTT CTCGGTCCTGATGTGGTGCT
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNDTTHAAEGAEPKVLASADILKVLTCLPHRYPFLMVDRVEQIDGDLSCVGIKNVTANEPHFQGHFPGNPVMPGVLIIEG MAQTAGVVCVLGKDKEKPSLVYFMTIDEAKFRRPVVPGDVLEYHMTRISRRRNMWWYRGEAKVRGEIVAQAKVGAMIMEN S
Sequences:
>Translated_161_residues MNDTTHAAEGAEPKVLASADILKVLTCLPHRYPFLMVDRVEQIDGDLSCVGIKNVTANEPHFQGHFPGNPVMPGVLIIEG MAQTAGVVCVLGKDKEKPSLVYFMTIDEAKFRRPVVPGDVLEYHMTRISRRRNMWWYRGEAKVRGEIVAQAKVGAMIMEN S >Mature_161_residues MNDTTHAAEGAEPKVLASADILKVLTCLPHRYPFLMVDRVEQIDGDLSCVGIKNVTANEPHFQGHFPGNPVMPGVLIIEG MAQTAGVVCVLGKDKEKPSLVYFMTIDEAKFRRPVVPGDVLEYHMTRISRRRNMWWYRGEAKVRGEIVAQAKVGAMIMEN S
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=135, Percent_Identity=46.6666666666667, Blast_Score=129, Evalue=8e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 17923; Mature: 17923
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTTHAAEGAEPKVLASADILKVLTCLPHRYPFLMVDRVEQIDGDLSCVGIKNVTANEP CCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCEEEEEECCCCCCCC HFQGHFPGNPVMPGVLIIEGMAQTAGVVCVLGKDKEKPSLVYFMTIDEAKFRRPVVPGDV CCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCHHHCCCCCCHHH LEYHMTRISRRRNMWWYRGEAKVRGEIVAQAKVGAMIMENS HHHHHHHHHHHCCCEEECCCCEECEEEEEEEEECEEEEECC >Mature Secondary Structure MNDTTHAAEGAEPKVLASADILKVLTCLPHRYPFLMVDRVEQIDGDLSCVGIKNVTANEP CCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCEEEEEECCCCCCCC HFQGHFPGNPVMPGVLIIEGMAQTAGVVCVLGKDKEKPSLVYFMTIDEAKFRRPVVPGDV CCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCHHHCCCCCCHHH LEYHMTRISRRRNMWWYRGEAKVRGEIVAQAKVGAMIMENS HHHHHHHHHHHCCCEEECCCCEECEEEEEEEEECEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA