| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is phnB [C]
Identifier: 154248106
GI number: 154248106
Start: 4631451
End: 4631888
Strand: Reverse
Name: phnB [C]
Synonym: Xaut_4186
Alternate gene names: 154248106
Gene position: 4631888-4631451 (Counterclockwise)
Preceding gene: 154248107
Following gene: 154248103
Centisome position: 87.25
GC content: 66.44
Gene sequence:
>438_bases ATGTCCGATACCGCCGAGACGACCACTCCCACGGCCGATTTCAGCGCCATGCCCCCGGTAAAGGGCGGCGTCACGGCCTA CCTGACGGTGGACGGCGCCATGAAGGCAGTCGAGTTCTACAAGAGCGCCCTTGGCGCGGAACTCGCCTTCGCCATCCCTC CGGATGACAGCGGCCGCACCATGCACGTGCACCTCTACATCAACGGCAGCTCGGTGATGCTGGCCGATCCCTATCCCGAA TATTGCGCCGGCCCGGTGGAGAAGCTGGGCGGCTTCAATCTCAGCCTGCACGTCACCGACACGGACGCGGCATTCGAGCG GGCCGTGGCGGCGGGGGCGAGCGTGATGATGCCACCCTCCGACATGTTCTGGGGCGCCCGCTATGCGCAGGTGCGCGATC CCTTCGGCGTCGTCTGGGCCTTCAACCAGCCGCACTGA
Upstream 100 bases:
>100_bases GGACCTGAAAAAGTTCGCGGCCGGCTGTCGGGATGCCGGCCCGGGGGACGTTCTTGCAGCACGGGCGCCCCCTTTCCGGG GCTCCAGCAGGAGGAAAACC
Downstream 100 bases:
>100_bases TCTCGCGTCTGGCTCAGCTGACCGCGCTCACCCGCTCCTCGCTGATGCCGTCCTCGTCCGGATGGGGTTCGCCGGTCTCG GCCACGCCGAGATCGGCCGC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSDTAETTTPTADFSAMPPVKGGVTAYLTVDGAMKAVEFYKSALGAELAFAIPPDDSGRTMHVHLYINGSSVMLADPYPE YCAGPVEKLGGFNLSLHVTDTDAAFERAVAAGASVMMPPSDMFWGARYAQVRDPFGVVWAFNQPH
Sequences:
>Translated_145_residues MSDTAETTTPTADFSAMPPVKGGVTAYLTVDGAMKAVEFYKSALGAELAFAIPPDDSGRTMHVHLYINGSSVMLADPYPE YCAGPVEKLGGFNLSLHVTDTDAAFERAVAAGASVMMPPSDMFWGARYAQVRDPFGVVWAFNQPH >Mature_144_residues SDTAETTTPTADFSAMPPVKGGVTAYLTVDGAMKAVEFYKSALGAELAFAIPPDDSGRTMHVHLYINGSSVMLADPYPEY CAGPVEKLGGFNLSLHVTDTDAAFERAVAAGASVMMPPSDMFWGARYAQVRDPFGVVWAFNQPH
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 15468; Mature: 15336
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTAETTTPTADFSAMPPVKGGVTAYLTVDGAMKAVEFYKSALGAELAFAIPPDDSGRT CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCE MHVHLYINGSSVMLADPYPEYCAGPVEKLGGFNLSLHVTDTDAAFERAVAAGASVMMPPS EEEEEEECCCEEEEECCCHHHHCCHHHHHCCCEEEEEEECCHHHHHHHHHCCCEEEECCC DMFWGARYAQVRDPFGVVWAFNQPH CCCCCCEEEECCCCEEEEEEECCCC >Mature Secondary Structure SDTAETTTPTADFSAMPPVKGGVTAYLTVDGAMKAVEFYKSALGAELAFAIPPDDSGRT CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCE MHVHLYINGSSVMLADPYPEYCAGPVEKLGGFNLSLHVTDTDAAFERAVAAGASVMMPPS EEEEEEECCCEEEEECCCHHHHCCHHHHHCCCEEEEEEECCHHHHHHHHHCCCEEEECCC DMFWGARYAQVRDPFGVVWAFNQPH CCCCCCEEEECCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]