| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248103
Identifier: 154248103
GI number: 154248103
Start: 4628261
End: 4628869
Strand: Reverse
Name: 154248103
Synonym: Xaut_4183
Alternate gene names: NA
Gene position: 4628869-4628261 (Counterclockwise)
Preceding gene: 154248106
Following gene: 154248100
Centisome position: 87.19
GC content: 68.97
Gene sequence:
>609_bases ATGGCTAGAATCGAAAGTGTGTGCGTCTATTGCGGCTCCGCATCCGGCTCGGATCCGCTGTTCGCCGAGGAAGCGCGCCG GTTCGGACAGATCCTCGCGGCCGAAGGGGTGCGCCTCGTCTATGGCGGCGGCGGCATCGGGCTGATGGGCGAGGTCGCGA GCGCCACTGCGCTGGCCGGCGGGGCGGTCACCGGCATCATCCCGCGCTTCCTCATGAACCGGGAGCGCGCCTTCGCCCAT GAGGCGGAGATGATCGTGGTGGAGGACATGCACGCCCGCAAGCGGCTCATGTTCGAGCGGGCGGACGCCTTCGTGGCCCT GCCCGGCGGGGTCGGCACCCTAGAGGAGCTGGTGGAACAGCTGACCTGGGCGCAGCTGGGCCGTCACCGCAAGCCCATCC TCATCGCCAATACGTCAGGCTTCTGGGATCCGTTCCTGAGCCTGATCGAGCATATGCGGTCCACGGCCTTCATCCGCGAC ACGACGCCGGTGGAGATCCTGTCCGCCGATCGGGTGGAAGACATCCTGCCGCGGCTGCGGGAAGCGGCGGCCGCCGTGCC CGAGCGCGCGCTTCACGCGGCGGACGGCGAACTGGCCGACCGCATGTGA
Upstream 100 bases:
>100_bases CGCAGCGACAAGCTAGAGCCCCGGTCCGACCGACCCGTTCCCTCACGCCCCTGACCGTTCGTCACGTCCCACACGGCGTC GAGTTTGCTAAAGTGCGTCC
Downstream 100 bases:
>100_bases GACAGCGTCCTGCCCCCGGCAGCGCTTCAGCTGCCCGGCTGGTCGAGCGCGGCGATGGCGACCATGAGAACCGAGCCGAT CAACACGATCGTGACGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MARIESVCVYCGSASGSDPLFAEEARRFGQILAAEGVRLVYGGGGIGLMGEVASATALAGGAVTGIIPRFLMNRERAFAH EAEMIVVEDMHARKRLMFERADAFVALPGGVGTLEELVEQLTWAQLGRHRKPILIANTSGFWDPFLSLIEHMRSTAFIRD TTPVEILSADRVEDILPRLREAAAAVPERALHAADGELADRM
Sequences:
>Translated_202_residues MARIESVCVYCGSASGSDPLFAEEARRFGQILAAEGVRLVYGGGGIGLMGEVASATALAGGAVTGIIPRFLMNRERAFAH EAEMIVVEDMHARKRLMFERADAFVALPGGVGTLEELVEQLTWAQLGRHRKPILIANTSGFWDPFLSLIEHMRSTAFIRD TTPVEILSADRVEDILPRLREAAAAVPERALHAADGELADRM >Mature_201_residues ARIESVCVYCGSASGSDPLFAEEARRFGQILAAEGVRLVYGGGGIGLMGEVASATALAGGAVTGIIPRFLMNRERAFAHE AEMIVVEDMHARKRLMFERADAFVALPGGVGTLEELVEQLTWAQLGRHRKPILIANTSGFWDPFLSLIEHMRSTAFIRDT TPVEILSADRVEDILPRLREAAAAVPERALHAADGELADRM
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=212, Percent_Identity=38.2075471698113, Blast_Score=143, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 21904; Mature: 21772
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIESVCVYCGSASGSDPLFAEEARRFGQILAAEGVRLVYGGGGIGLMGEVASATALAG CCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCC GAVTGIIPRFLMNRERAFAHEAEMIVVEDMHARKRLMFERADAFVALPGGVGTLEELVEQ CHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH LTWAQLGRHRKPILIANTSGFWDPFLSLIEHMRSTAFIRDTTPVEILSADRVEDILPRLR HHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH EAAAAVPERALHAADGELADRM HHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure ARIESVCVYCGSASGSDPLFAEEARRFGQILAAEGVRLVYGGGGIGLMGEVASATALAG CCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCC GAVTGIIPRFLMNRERAFAHEAEMIVVEDMHARKRLMFERADAFVALPGGVGTLEELVEQ CHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH LTWAQLGRHRKPILIANTSGFWDPFLSLIEHMRSTAFIRDTTPVEILSADRVEDILPRLR HHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH EAAAAVPERALHAADGELADRM HHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]