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The map label for this gene is bbsG [H]

Identifier: 154247998

GI number: 154247998

Start: 4511252

End: 4512514

Strand: Reverse

Name: bbsG [H]

Synonym: Xaut_4077

Alternate gene names: 154247998

Gene position: 4512514-4511252 (Counterclockwise)

Preceding gene: 154247999

Following gene: 154247997

Centisome position: 85.0

GC content: 67.78

Gene sequence:

>1263_bases
ATGGATTTCGCCTATTCCGACAAGGTCGAGGGCCTGCGCGAGCGCGTCAGCGCTTTCATGGCGGCGCACGTCCTGCCCGC
CAACACCCAGTGGCACCGGCAGGTGGAGGCCGGCCGCTATCCCCTGGACCTGATCGAGCGGCTGAAGGCGAAGGCCTATT
CCGAGGGCCTGTGGAACCTGTTCCTGCCCGCCCTGAAGGATGACGAGCCGGGCACGCGCCTCACCAATCTGGAATATGCC
CCGCTGGCGGAGATCATGGGGCGCATTCCATGGGCTGCGGAAGTGTTCAACTGCAACGCGCCGGACACCGGGAACATGGA
GATCCTCCACATGTTCGCGACGCCCGCCCAGCGCGCGCAATGGCTCGCACCGCTGCTGGAGGGGCGCATCCGCTCCTGCG
TCGGCATCACCGAGCCGGACACCGCCTCCTCCGACCCCACCAATTTGCAGACCACCATCCTGCGCGACGGTTCCGACTAC
GTCATCAATGGCCGCAAGTGGTTCACCACCGGCGCCAAGCACCCCAACAACCGCTTCGTGATCGTGATGGGCCTCTCCGA
TCCCCGGCCGGAAGCCGATCCCCACGCCCGCCATTCCATGGTCATCGTGCCGTTCGATGCCCCCGGCGTGCGGCTGGTGC
GGGATGTGCCCATCATGCACCACCATGCGCCGGAGGGGCATTGCGAGGTGCTGTTCCGCGACGTGCGGGTGCCGGCGGAG
AACCTGCTCGGACAGGAGGGACAGGGCTTCGCGCTGGCCCAGGCGCGGCTCGGGCCGGGCCGGGTGCATCACTGCATGCG
CACCATCGGACAGTGCGAGCTGGCGCTGGAGCTGCTGATGGAACGCGCTCTGGAGCGCCGCACCTTCGGCCGCCACCTCG
CCGACTATGCCAATATCCAGGACTGGATCGCCAAGTCCCGCATCGAGATCGACCAGTTGCGCCTGCATGTGCTGCGCGCC
GCATGGCTCATGGACAAGGCCGGCAACCAGGCCGCACGCATCGAGGTGTCGGCCATCAAGGTGGCGGCGGCGCGGGTGCA
GACGCAAGTGGTGGACCGCGCCATCCAGGTGTTCGGTGCCATGGGCCTGACGCCGGATACGCCGCTCTCCTACCTGTGGA
CCTGGGGGCGGGCCATGCGCTTCATCGACGGGCCGGACGAGGTGCACCTGCGCACCATCGCCCGCGACGAGCTTAAAAAA
GCCAAGGCCCGGCGCGGCAGCACCGCCGCCTATCTCGTCACCCCCAGCGCCCATCAGGCGTGA

Upstream 100 bases:

>100_bases
CGCGTCGGCCGCCTGTCCGAGAACTACGCGCGCCGCGCCATCGAACTCATCACCACGGGCGCCGCCTGAGGCCCGCCTGC
GGGAACAAGGAAGACAAGAG

Downstream 100 bases:

>100_bases
TCGCAGAAAGGCATCCCCCATGCGCGGCTGGCGCGTCCATGAGATCACCGAAGACGGCGCCATGGTGTTCGGCGACTGCC
CCGATCCGCGCCCGGCCCAC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MDFAYSDKVEGLRERVSAFMAAHVLPANTQWHRQVEAGRYPLDLIERLKAKAYSEGLWNLFLPALKDDEPGTRLTNLEYA
PLAEIMGRIPWAAEVFNCNAPDTGNMEILHMFATPAQRAQWLAPLLEGRIRSCVGITEPDTASSDPTNLQTTILRDGSDY
VINGRKWFTTGAKHPNNRFVIVMGLSDPRPEADPHARHSMVIVPFDAPGVRLVRDVPIMHHHAPEGHCEVLFRDVRVPAE
NLLGQEGQGFALAQARLGPGRVHHCMRTIGQCELALELLMERALERRTFGRHLADYANIQDWIAKSRIEIDQLRLHVLRA
AWLMDKAGNQAARIEVSAIKVAAARVQTQVVDRAIQVFGAMGLTPDTPLSYLWTWGRAMRFIDGPDEVHLRTIARDELKK
AKARRGSTAAYLVTPSAHQA

Sequences:

>Translated_420_residues
MDFAYSDKVEGLRERVSAFMAAHVLPANTQWHRQVEAGRYPLDLIERLKAKAYSEGLWNLFLPALKDDEPGTRLTNLEYA
PLAEIMGRIPWAAEVFNCNAPDTGNMEILHMFATPAQRAQWLAPLLEGRIRSCVGITEPDTASSDPTNLQTTILRDGSDY
VINGRKWFTTGAKHPNNRFVIVMGLSDPRPEADPHARHSMVIVPFDAPGVRLVRDVPIMHHHAPEGHCEVLFRDVRVPAE
NLLGQEGQGFALAQARLGPGRVHHCMRTIGQCELALELLMERALERRTFGRHLADYANIQDWIAKSRIEIDQLRLHVLRA
AWLMDKAGNQAARIEVSAIKVAAARVQTQVVDRAIQVFGAMGLTPDTPLSYLWTWGRAMRFIDGPDEVHLRTIARDELKK
AKARRGSTAAYLVTPSAHQA
>Mature_420_residues
MDFAYSDKVEGLRERVSAFMAAHVLPANTQWHRQVEAGRYPLDLIERLKAKAYSEGLWNLFLPALKDDEPGTRLTNLEYA
PLAEIMGRIPWAAEVFNCNAPDTGNMEILHMFATPAQRAQWLAPLLEGRIRSCVGITEPDTASSDPTNLQTTILRDGSDY
VINGRKWFTTGAKHPNNRFVIVMGLSDPRPEADPHARHSMVIVPFDAPGVRLVRDVPIMHHHAPEGHCEVLFRDVRVPAE
NLLGQEGQGFALAQARLGPGRVHHCMRTIGQCELALELLMERALERRTFGRHLADYANIQDWIAKSRIEIDQLRLHVLRA
AWLMDKAGNQAARIEVSAIKVAAARVQTQVVDRAIQVFGAMGLTPDTPLSYLWTWGRAMRFIDGPDEVHLRTIARDELKK
AKARRGSTAAYLVTPSAHQA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=401, Percent_Identity=50.1246882793017, Blast_Score=376, Evalue=1e-104,
Organism=Homo sapiens, GI48976061, Length=401, Percent_Identity=50.1246882793017, Blast_Score=376, Evalue=1e-104,
Organism=Homo sapiens, GI38505218, Length=411, Percent_Identity=44.5255474452555, Blast_Score=356, Evalue=2e-98,
Organism=Homo sapiens, GI4557231, Length=410, Percent_Identity=24.390243902439, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI187960098, Length=410, Percent_Identity=24.390243902439, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI21361497, Length=377, Percent_Identity=25.1989389920424, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4501859, Length=356, Percent_Identity=25.8426966292135, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4557233, Length=284, Percent_Identity=27.4647887323944, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI76496475, Length=394, Percent_Identity=24.3654822335025, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI4557235, Length=394, Percent_Identity=24.3654822335025, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI4501857, Length=394, Percent_Identity=23.0964467005076, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI7656849, Length=384, Percent_Identity=23.1770833333333, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI226958412, Length=285, Percent_Identity=24.9122807017544, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI226958414, Length=285, Percent_Identity=24.9122807017544, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI87081958, Length=318, Percent_Identity=30.5031446540881, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786223, Length=267, Percent_Identity=25.8426966292135, Blast_Score=95, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17562446, Length=358, Percent_Identity=47.4860335195531, Blast_Score=348, Evalue=3e-96,
Organism=Caenorhabditis elegans, GI17534899, Length=410, Percent_Identity=25.8536585365854, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17569725, Length=366, Percent_Identity=25.6830601092896, Blast_Score=121, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI17570075, Length=412, Percent_Identity=23.0582524271845, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17533517, Length=398, Percent_Identity=26.1306532663317, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17505929, Length=396, Percent_Identity=24.7474747474747, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17551932, Length=394, Percent_Identity=23.0964467005076, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=343, Percent_Identity=25.0728862973761, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=327, Percent_Identity=28.7461773700306, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=285, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=242, Percent_Identity=28.9256198347107, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24660351, Length=410, Percent_Identity=26.5853658536585, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21356377, Length=345, Percent_Identity=27.8260869565217, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24646207, Length=365, Percent_Identity=26.5753424657534, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24666513, Length=284, Percent_Identity=27.4647887323944, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281363737, Length=375, Percent_Identity=26.4, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI21355753, Length=284, Percent_Identity=23.943661971831, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 47025; Mature: 47025

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFAYSDKVEGLRERVSAFMAAHVLPANTQWHRQVEAGRYPLDLIERLKAKAYSEGLWNL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHH
FLPALKDDEPGTRLTNLEYAPLAEIMGRIPWAAEVFNCNAPDTGNMEILHMFATPAQRAQ
HHHCCCCCCCCCEECCCCCCCHHHHHHCCCCHHHEEECCCCCCCCEEEEEEECCCHHHHH
WLAPLLEGRIRSCVGITEPDTASSDPTNLQTTILRDGSDYVINGRKWFTTGAKHPNNRFV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCEEEEECCCCCCCCCEE
IVMGLSDPRPEADPHARHSMVIVPFDAPGVRLVRDVPIMHHHAPEGHCEVLFRDVRVPAE
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHCCCHH
NLLGQEGQGFALAQARLGPGRVHHCMRTIGQCELALELLMERALERRTFGRHLADYANIQ
HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWIAKSRIEIDQLRLHVLRAAWLMDKAGNQAARIEVSAIKVAAARVQTQVVDRAIQVFGA
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
MGLTPDTPLSYLWTWGRAMRFIDGPDEVHLRTIARDELKKAKARRGSTAAYLVTPSAHQA
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MDFAYSDKVEGLRERVSAFMAAHVLPANTQWHRQVEAGRYPLDLIERLKAKAYSEGLWNL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHH
FLPALKDDEPGTRLTNLEYAPLAEIMGRIPWAAEVFNCNAPDTGNMEILHMFATPAQRAQ
HHHCCCCCCCCCEECCCCCCCHHHHHHCCCCHHHEEECCCCCCCCEEEEEEECCCHHHHH
WLAPLLEGRIRSCVGITEPDTASSDPTNLQTTILRDGSDYVINGRKWFTTGAKHPNNRFV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCEEEEECCCCCCCCCEE
IVMGLSDPRPEADPHARHSMVIVPFDAPGVRLVRDVPIMHHHAPEGHCEVLFRDVRVPAE
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHCCCHH
NLLGQEGQGFALAQARLGPGRVHHCMRTIGQCELALELLMERALERRTFGRHLADYANIQ
HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWIAKSRIEIDQLRLHVLRAAWLMDKAGNQAARIEVSAIKVAAARVQTQVVDRAIQVFGA
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
MGLTPDTPLSYLWTWGRAMRFIDGPDEVHLRTIARDELKKAKARRGSTAAYLVTPSAHQA
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]