| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247999
Identifier: 154247999
GI number: 154247999
Start: 4512546
End: 4513622
Strand: Reverse
Name: 154247999
Synonym: Xaut_4078
Alternate gene names: NA
Gene position: 4513622-4512546 (Counterclockwise)
Preceding gene: 154248000
Following gene: 154247998
Centisome position: 85.02
GC content: 71.31
Gene sequence:
>1077_bases ATGTCACCTGTCACCCCCACGTCTGTCGCAGCCCCACCGGCCGCAGCCCCACCGGCGCCGGCTGCCGCAGGCTTCGATGC CGAAGCGCTGGCGGGCCATCTCGCCGCGGTCGTGCCCGGCTTCCACGGGCCGGTGGCGGTGGCGCCCATCTCCGGCGGGC AGTCCAATCCCACCTTCTTCGTGGATAGCCCCAGCCACCGGCTGGTGCTGCGCAAGCAGCCGGGCGGGCAGGTTCTGCCC TCGGCACATGCGGTCGACCGGGAGCACCGCATCCAGCACGCCCTCGCCGACAGCGCCGTGCCGGTGCCGCGCATGGTGCA CTTCTGCGCCGACCCGGCGGTCATCGGCACGCCCTTCTATGTGATGGAGCGCCTCGACGGCCGGGTGTTCGGCGATTGTG GCCTCGCCGCCGCGCCGGTGGGCGAGCGCAAGGCCATGTATCGCAGCGCCGCCGACATGCTGGCGCGGCTCCATCGGGTG GACTGGCGCGCCGTGGGGCTCGGCGATTATGGCCGGCCGGATGGCTATTTCGAGCGGCAGGTGGCGCGCTGGACCCGCCA GTGGCAGCAATCGCGCACCCGCGAGCTGGCGGAGGTGGACGCCCTCATCGACTGGCTGCCACGCCACTTCCCCGCCTCCG GCGCGGCCACCATCGCGCACGGGGATTTTCGCATCGGCAACCTCATGTTCCATCCCGTCGAGCCGCGGGTGATCGCGGTG CTGGACTGGGAACTCTCCACCATCGGCGATCCCATGGCCGACGTGGCCCATTTCGCCGTCACCTGGGACACGCGGCCGGA GGAATATGGCGGCCTCAGGGGCACCGACCTTGCCGCGCAGGGCCTGCCGGAGCGCGCGGATTTCCTCAACTGGTACGGCG CCGCCGGCGGCCGGGCACAGGACTTTTCGCCCTTCCACCGGGTGTTCGCCCTGTTTCGCTTCGCCGTGATCTTCGAGGGC ATCGCCGCCCGCGCGAAGAACGGCAATGCCGCTTCTGAAGGCGCCGAACGCGTCGGCCGCCTGTCCGAGAACTACGCGCG CCGCGCCATCGAACTCATCACCACGGGCGCCGCCTGA
Upstream 100 bases:
>100_bases AGCCGGGGGCGTCCGCGTGCCCCGGCGCCCGCCCGCGCAACACCACCGCCTTCCCGATCCGCATGGGATGCGCTCCCGGC CGCCTTTGACGCGAGGATCT
Downstream 100 bases:
>100_bases GGCCCGCCTGCGGGAACAAGGAAGACAAGAGATGGATTTCGCCTATTCCGACAAGGTCGAGGGCCTGCGCGAGCGCGTCA GCGCTTTCATGGCGGCGCAC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSPVTPTSVAAPPAAAPPAPAAAGFDAEALAGHLAAVVPGFHGPVAVAPISGGQSNPTFFVDSPSHRLVLRKQPGGQVLP SAHAVDREHRIQHALADSAVPVPRMVHFCADPAVIGTPFYVMERLDGRVFGDCGLAAAPVGERKAMYRSAADMLARLHRV DWRAVGLGDYGRPDGYFERQVARWTRQWQQSRTRELAEVDALIDWLPRHFPASGAATIAHGDFRIGNLMFHPVEPRVIAV LDWELSTIGDPMADVAHFAVTWDTRPEEYGGLRGTDLAAQGLPERADFLNWYGAAGGRAQDFSPFHRVFALFRFAVIFEG IAARAKNGNAASEGAERVGRLSENYARRAIELITTGAA
Sequences:
>Translated_358_residues MSPVTPTSVAAPPAAAPPAPAAAGFDAEALAGHLAAVVPGFHGPVAVAPISGGQSNPTFFVDSPSHRLVLRKQPGGQVLP SAHAVDREHRIQHALADSAVPVPRMVHFCADPAVIGTPFYVMERLDGRVFGDCGLAAAPVGERKAMYRSAADMLARLHRV DWRAVGLGDYGRPDGYFERQVARWTRQWQQSRTRELAEVDALIDWLPRHFPASGAATIAHGDFRIGNLMFHPVEPRVIAV LDWELSTIGDPMADVAHFAVTWDTRPEEYGGLRGTDLAAQGLPERADFLNWYGAAGGRAQDFSPFHRVFALFRFAVIFEG IAARAKNGNAASEGAERVGRLSENYARRAIELITTGAA >Mature_357_residues SPVTPTSVAAPPAAAPPAPAAAGFDAEALAGHLAAVVPGFHGPVAVAPISGGQSNPTFFVDSPSHRLVLRKQPGGQVLPS AHAVDREHRIQHALADSAVPVPRMVHFCADPAVIGTPFYVMERLDGRVFGDCGLAAAPVGERKAMYRSAADMLARLHRVD WRAVGLGDYGRPDGYFERQVARWTRQWQQSRTRELAEVDALIDWLPRHFPASGAATIAHGDFRIGNLMFHPVEPRVIAVL DWELSTIGDPMADVAHFAVTWDTRPEEYGGLRGTDLAAQGLPERADFLNWYGAAGGRAQDFSPFHRVFALFRFAVIFEGI AARAKNGNAASEGAERVGRLSENYARRAIELITTGAA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=306, Percent_Identity=43.1372549019608, Blast_Score=265, Evalue=3e-71, Organism=Homo sapiens, GI48976061, Length=306, Percent_Identity=43.1372549019608, Blast_Score=265, Evalue=3e-71, Organism=Homo sapiens, GI38505218, Length=338, Percent_Identity=35.5029585798817, Blast_Score=225, Evalue=4e-59, Organism=Caenorhabditis elegans, GI17562446, Length=312, Percent_Identity=37.1794871794872, Blast_Score=215, Evalue=3e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38564; Mature: 38433
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPVTPTSVAAPPAAAPPAPAAAGFDAEALAGHLAAVVPGFHGPVAVAPISGGQSNPTFF CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEE VDSPSHRLVLRKQPGGQVLPSAHAVDREHRIQHALADSAVPVPRMVHFCADPAVIGTPFY EECCCCEEEEEECCCCCCCCCHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHCCHHH VMERLDGRVFGDCGLAAAPVGERKAMYRSAADMLARLHRVDWRAVGLGDYGRPDGYFERQ HHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHH VARWTRQWQQSRTRELAEVDALIDWLPRHFPASGAATIAHGDFRIGNLMFHPVEPRVIAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCEEEECCCCCEEEE LDWELSTIGDPMADVAHFAVTWDTRPEEYGGLRGTDLAAQGLPERADFLNWYGAAGGRAQ EECCHHHCCCHHHHHHEEEEEECCCHHHHCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCC DFSPFHRVFALFRFAVIFEGIAARAKNGNAASEGAERVGRLSENYARRAIELITTGAA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPVTPTSVAAPPAAAPPAPAAAGFDAEALAGHLAAVVPGFHGPVAVAPISGGQSNPTFF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEE VDSPSHRLVLRKQPGGQVLPSAHAVDREHRIQHALADSAVPVPRMVHFCADPAVIGTPFY EECCCCEEEEEECCCCCCCCCHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHCCHHH VMERLDGRVFGDCGLAAAPVGERKAMYRSAADMLARLHRVDWRAVGLGDYGRPDGYFERQ HHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHH VARWTRQWQQSRTRELAEVDALIDWLPRHFPASGAATIAHGDFRIGNLMFHPVEPRVIAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCEEEECCCCCEEEE LDWELSTIGDPMADVAHFAVTWDTRPEEYGGLRGTDLAAQGLPERADFLNWYGAAGGRAQ EECCHHHCCCHHHHHHEEEEEECCCHHHHCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCC DFSPFHRVFALFRFAVIFEGIAARAKNGNAASEGAERVGRLSENYARRAIELITTGAA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA