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The map label for this gene is ynfJ [C]

Identifier: 154247806

GI number: 154247806

Start: 4301935

End: 4303746

Strand: Reverse

Name: ynfJ [C]

Synonym: Xaut_3883

Alternate gene names: 154247806

Gene position: 4303746-4301935 (Counterclockwise)

Preceding gene: 154247807

Following gene: 154247799

Centisome position: 81.07

GC content: 71.14

Gene sequence:

>1812_bases
ATGGCCGGCCCGCCCGCCGATTCCGGATCTGCCGATCCTGCGCCGGCCGGTACCGGGGCGCCGGTCTCCATCCTCGCCCG
TTTTGTCGCCGCCGTCCGGGCCAGCGTGCGCGAGCGGGAAGTTGCGCTGGTGGGGATCGCGGCGGTGATGGGCATGCTCG
CCGGGCTCGCGGCCAGCGCCATGAGCCAGACCACCCAATGGATGCACGAGGCACTGTTCCAGCTCGCCCCCGGCGACCGG
CTCAGCGCCGCTCCGGCCCTGGCCTCGACCTTGATGGTTCTGGTCCCGGTGGCGGGCGGGCTGGCCATGGGGCTCATCGC
CCTCGCCCTGAAGCGCTGGCGCCGACGCAATTTCGTCGACCCCATCGAGGCCAATGCGCTGCACGGCGGGCGCATGTCGC
TGACCGACAGCATCATCGTGTCGCTGCAGACCATGGTCTCCAACGGCTTCGGCGCGTCGCTCGGGCTGGAGGCGGGCTAT
TCGCAGATCGGCGGAGGCATCGCCGCCCGCCTCGGACGGGCCTTCCACCTGCGGCGCAACGACCTGCGGATCCTGGTGGG
CGCGGGGGCGGCGGCGGGCATCGGCGCGGCCTTCGATGCGCCGCTCATGGGCGCCTTCTACGGCTTCGAGATCATCATCG
GAAGCTATTCCATTCCGGCAGCCGCCCCGGTGCTGGCGTCCACCGTCTCGGCGGTGATGGTGGCGCGGCTGCTCGGCGTC
CATGTGGATCCGCTGAACATCCCGCTTGATGTGGTGGTGCAGCCCCTCGACATCCTGCCCATCGCGCTGCTGGGGCTGCT
GGCGGCGGGGGTCGCCATCCTCATCATGCGCCTGGTCACCGGGGTGGAGATGCTGTTCGGCAAGAGCGGCATTCCCGCGC
CGCTGCGGCCGGCGGTGGCGGGCCTTGGCGTCGGCGCGCTGGCGCTCTACAGCCCGCAGGTGCTCTCCGACGGCCATGGC
GCGCTGCACCTGCAGGTGGACAGCCCGGTGGCGCTCTCGGTGGCGATCATCTTCGGCCTGAAGATCCTGGCCTCGGCCCT
GTCCATCGGCTCGGGATTTCGCGGCGGCCTGTTCTTCGCCTCGCTGTTTCTCGGGGCGTTGATGGGCAAGCTCTATGGCG
GCGCGCTCGCCATGCTGTGGCCGTCGCTCCAGCTCGATCCGGCGGTCACCGCGGTGGCCGGCATGGGGGCGCTGGCGGTG
GGCATCATCGGCGGGCCGCTCACCATGACCTTCCTGGTGCTGGAGATGACGCGGGACCTCGCCCTGTCCGGCTATGTGCT
GGCGGCGGCGGTGGTGACCTCCCTCGCGGTGCGGGAGACCTTCGGCTACTCCTTCTCCACCTGGCGCTTTCACCTGCGCG
GAGAGAGCATCCGCAGCGCGCAGGACGTGGGCTGGATGCGCGAGTTGACCGTCGCCCGCATGATGCGCACCGACATGGCC
ACCTTCCCCGAGCATGGCACCATCGGCGCCCTGCGCACGGCCTTCCCGCTGGGCGCGCGGCGGATGGTGGTGCTGGTGGA
CGGCGCTGGCGCCTATGCCGGGCTGGTGCGTGTGGTGGAGGCCCATGCGGCCGAGCACGATCCCGCCGAAGCCGTCTCCC
GGCTTGCCACCCATCGCGACGACATGCTGCTGCCGGCCATGAACGTGCAGGAGGCGGCGCTGGCCTTCGATGCGGCCAAG
GCCGAGGATCTCGCCGTGGTGAACGACCGCGCCACCCGCCGCCTCATGGGCCTTTTGGGCGAGGCCCACGTGCTGCGACG
CTACGCCGAGGAGCTGGACAAGGCCCGGCAAGGTCTCGGCGCGGAGGTCTGA

Upstream 100 bases:

>100_bases
TGGACCGTGACGGAGTTGCTGGAATGGCAGGGCGAGCGCGCCTCCGCCGGTCGGCTGCCGCCCAAGGGCTTCCCCCGCAG
CAACAAATTCAGCTGAGCTG

Downstream 100 bases:

>100_bases
GGGGCGCGCACGTCTGATACGATGGCGGCCGAAGAGCCGCCCGCCTTCAGCCCCGTTCAGCCGCCCTTGGGAAATTCCAG
CCCCATCTCGCGGTAGCGTT

Product: chloride channel core protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 602

Protein sequence:

>603_residues
MAGPPADSGSADPAPAGTGAPVSILARFVAAVRASVREREVALVGIAAVMGMLAGLAASAMSQTTQWMHEALFQLAPGDR
LSAAPALASTLMVLVPVAGGLAMGLIALALKRWRRRNFVDPIEANALHGGRMSLTDSIIVSLQTMVSNGFGASLGLEAGY
SQIGGGIAARLGRAFHLRRNDLRILVGAGAAAGIGAAFDAPLMGAFYGFEIIIGSYSIPAAAPVLASTVSAVMVARLLGV
HVDPLNIPLDVVVQPLDILPIALLGLLAAGVAILIMRLVTGVEMLFGKSGIPAPLRPAVAGLGVGALALYSPQVLSDGHG
ALHLQVDSPVALSVAIIFGLKILASALSIGSGFRGGLFFASLFLGALMGKLYGGALAMLWPSLQLDPAVTAVAGMGALAV
GIIGGPLTMTFLVLEMTRDLALSGYVLAAAVVTSLAVRETFGYSFSTWRFHLRGESIRSAQDVGWMRELTVARMMRTDMA
TFPEHGTIGALRTAFPLGARRMVVLVDGAGAYAGLVRVVEAHAAEHDPAEAVSRLATHRDDMLLPAMNVQEAALAFDAAK
AEDLAVVNDRATRRLMGLLGEAHVLRRYAEELDKARQGLGAEV

Sequences:

>Translated_603_residues
MAGPPADSGSADPAPAGTGAPVSILARFVAAVRASVREREVALVGIAAVMGMLAGLAASAMSQTTQWMHEALFQLAPGDR
LSAAPALASTLMVLVPVAGGLAMGLIALALKRWRRRNFVDPIEANALHGGRMSLTDSIIVSLQTMVSNGFGASLGLEAGY
SQIGGGIAARLGRAFHLRRNDLRILVGAGAAAGIGAAFDAPLMGAFYGFEIIIGSYSIPAAAPVLASTVSAVMVARLLGV
HVDPLNIPLDVVVQPLDILPIALLGLLAAGVAILIMRLVTGVEMLFGKSGIPAPLRPAVAGLGVGALALYSPQVLSDGHG
ALHLQVDSPVALSVAIIFGLKILASALSIGSGFRGGLFFASLFLGALMGKLYGGALAMLWPSLQLDPAVTAVAGMGALAV
GIIGGPLTMTFLVLEMTRDLALSGYVLAAAVVTSLAVRETFGYSFSTWRFHLRGESIRSAQDVGWMRELTVARMMRTDMA
TFPEHGTIGALRTAFPLGARRMVVLVDGAGAYAGLVRVVEAHAAEHDPAEAVSRLATHRDDMLLPAMNVQEAALAFDAAK
AEDLAVVNDRATRRLMGLLGEAHVLRRYAEELDKARQGLGAEV
>Mature_602_residues
AGPPADSGSADPAPAGTGAPVSILARFVAAVRASVREREVALVGIAAVMGMLAGLAASAMSQTTQWMHEALFQLAPGDRL
SAAPALASTLMVLVPVAGGLAMGLIALALKRWRRRNFVDPIEANALHGGRMSLTDSIIVSLQTMVSNGFGASLGLEAGYS
QIGGGIAARLGRAFHLRRNDLRILVGAGAAAGIGAAFDAPLMGAFYGFEIIIGSYSIPAAAPVLASTVSAVMVARLLGVH
VDPLNIPLDVVVQPLDILPIALLGLLAAGVAILIMRLVTGVEMLFGKSGIPAPLRPAVAGLGVGALALYSPQVLSDGHGA
LHLQVDSPVALSVAIIFGLKILASALSIGSGFRGGLFFASLFLGALMGKLYGGALAMLWPSLQLDPAVTAVAGMGALAVG
IIGGPLTMTFLVLEMTRDLALSGYVLAAAVVTSLAVRETFGYSFSTWRFHLRGESIRSAQDVGWMRELTVARMMRTDMAT
FPEHGTIGALRTAFPLGARRMVVLVDGAGAYAGLVRVVEAHAAEHDPAEAVSRLATHRDDMLLPAMNVQEAALAFDAAKA
EDLAVVNDRATRRLMGLLGEAHVLRRYAEELDKARQGLGAEV

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=402, Percent_Identity=27.8606965174129, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 62356; Mature: 62225

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPPADSGSADPAPAGTGAPVSILARFVAAVRASVREREVALVGIAAVMGMLAGLAASA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSQTTQWMHEALFQLAPGDRLSAAPALASTLMVLVPVAGGLAMGLIALALKRWRRRNFVD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PIEANALHGGRMSLTDSIIVSLQTMVSNGFGASLGLEAGYSQIGGGIAARLGRAFHLRRN
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHEECC
DLRILVGAGAAAGIGAAFDAPLMGAFYGFEIIIGSYSIPAAAPVLASTVSAVMVARLLGV
CEEEEEECCCHHCCCCHHCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCC
HVDPLNIPLDVVVQPLDILPIALLGLLAAGVAILIMRLVTGVEMLFGKSGIPAPLRPAVA
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GLGVGALALYSPQVLSDGHGALHLQVDSPVALSVAIIFGLKILASALSIGSGFRGGLFFA
HCCHHHHHHCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SLFLGALMGKLYGGALAMLWPSLQLDPAVTAVAGMGALAVGIIGGPLTMTFLVLEMTRDL
HHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ALSGYVLAAAVVTSLAVRETFGYSFSTWRFHLRGESIRSAQDVGWMRELTVARMMRTDMA
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TFPEHGTIGALRTAFPLGARRMVVLVDGAGAYAGLVRVVEAHAAEHDPAEAVSRLATHRD
CCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
DMLLPAMNVQEAALAFDAAKAEDLAVVNDRATRRLMGLLGEAHVLRRYAEELDKARQGLG
CCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AEV
CCC
>Mature Secondary Structure 
AGPPADSGSADPAPAGTGAPVSILARFVAAVRASVREREVALVGIAAVMGMLAGLAASA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSQTTQWMHEALFQLAPGDRLSAAPALASTLMVLVPVAGGLAMGLIALALKRWRRRNFVD
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PIEANALHGGRMSLTDSIIVSLQTMVSNGFGASLGLEAGYSQIGGGIAARLGRAFHLRRN
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHEECC
DLRILVGAGAAAGIGAAFDAPLMGAFYGFEIIIGSYSIPAAAPVLASTVSAVMVARLLGV
CEEEEEECCCHHCCCCHHCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCC
HVDPLNIPLDVVVQPLDILPIALLGLLAAGVAILIMRLVTGVEMLFGKSGIPAPLRPAVA
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GLGVGALALYSPQVLSDGHGALHLQVDSPVALSVAIIFGLKILASALSIGSGFRGGLFFA
HCCHHHHHHCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SLFLGALMGKLYGGALAMLWPSLQLDPAVTAVAGMGALAVGIIGGPLTMTFLVLEMTRDL
HHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ALSGYVLAAAVVTSLAVRETFGYSFSTWRFHLRGESIRSAQDVGWMRELTVARMMRTDMA
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TFPEHGTIGALRTAFPLGARRMVVLVDGAGAYAGLVRVVEAHAAEHDPAEAVSRLATHRD
CCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
DMLLPAMNVQEAALAFDAAKAEDLAVVNDRATRRLMGLLGEAHVLRRYAEELDKARQGLG
CCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AEV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]