| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yoaE [H]
Identifier: 154247797
GI number: 154247797
Start: 4292069
End: 4292830
Strand: Reverse
Name: yoaE [H]
Synonym: Xaut_3874
Alternate gene names: 154247797
Gene position: 4292830-4292069 (Counterclockwise)
Preceding gene: 154247799
Following gene: 154247796
Centisome position: 80.86
GC content: 67.85
Gene sequence:
>762_bases ATGCTGGACTGGATTACGTCGCCGGAAGCCTGGGCGGCACTCGTGACGCTCACGGCCATGGAGATCATCCTCGGCATCGA CAATGTGGTCTTCATCTCCCTGGTGGTGCAGAAGCTGCCCCCGGCCCAGGCGCTGCGGGCGCGGCAGGTGGGGCTGTCCG CCGCGCTCATCCTGCGCATCGCGCTGCTGTTCGCGCTCACCTGGCTCATCGGCCTGCAGCAGACCCTGTTCTCCGCCTTC GGCCACGATTTCTCCTGGCGCGACATCATCCTCATGGGCGGCGGTGCCTTCCTCATCGCCAAGGCCACCCAGGAAATGCA CGGCGCGCTGGAGGGCGAGGACGAGCTGGAGGCCGACGACGGCCCTGGCACCTACGCCCAGCGCGCCTTCCTGGCGGTGG TGGCGCAGGTGATCCTGCTCGACCTCGTGTTCTCGGTGGACTCCATCCTCACCGCCATCGGCATGGCGGAGCACCTCGCC ATCATGGTGCTGGCGGTGATCATCGCGGTGTCGATCATGTTCGCCGCGTCCGGCCCGCTTTCGGCCTTCATCGCCGCCCA TCCCACCACCAAGATGCTGGCGCTGGCGTTCCTCGTGCTCATCGGCGTCACGCTGGTGGCGGACGGTTTCGGCGCCCACA TCCCGAAGGGCTACATCTATGCGGCCATGGCCTTCTCGGTGATGGTGGAGATGCTGAACGTCGCCGCCTCCGGCCGGCGC CGGCGGCGGATCGCGGCGCGGCACGCGGAGGAGCAGCAATGA
Upstream 100 bases:
>100_bases CGGCACGCGCGGCGCCTTTCGCGCGACGATCGGCACCGGACATCTTGCGGTGCGCGCGAGTTCCCCCATTCTGGCGCGGA CTTGAGTGCTGGGGGATGGG
Downstream 100 bases:
>100_bases CCGACAAGGTGCTCGTGGTGACAGGCGGCAGCCGTGGCATCGGCGCCGCCTGCGTGATCAGGGCCGCGAAGGCGGGCTAT GGCCGGATCGCGCTGAACTA
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MLDWITSPEAWAALVTLTAMEIILGIDNVVFISLVVQKLPPAQALRARQVGLSAALILRIALLFALTWLIGLQQTLFSAF GHDFSWRDIILMGGGAFLIAKATQEMHGALEGEDELEADDGPGTYAQRAFLAVVAQVILLDLVFSVDSILTAIGMAEHLA IMVLAVIIAVSIMFAASGPLSAFIAAHPTTKMLALAFLVLIGVTLVADGFGAHIPKGYIYAAMAFSVMVEMLNVAASGRR RRRIAARHAEEQQ
Sequences:
>Translated_253_residues MLDWITSPEAWAALVTLTAMEIILGIDNVVFISLVVQKLPPAQALRARQVGLSAALILRIALLFALTWLIGLQQTLFSAF GHDFSWRDIILMGGGAFLIAKATQEMHGALEGEDELEADDGPGTYAQRAFLAVVAQVILLDLVFSVDSILTAIGMAEHLA IMVLAVIIAVSIMFAASGPLSAFIAAHPTTKMLALAFLVLIGVTLVADGFGAHIPKGYIYAAMAFSVMVEMLNVAASGRR RRRIAARHAEEQQ >Mature_253_residues MLDWITSPEAWAALVTLTAMEIILGIDNVVFISLVVQKLPPAQALRARQVGLSAALILRIALLFALTWLIGLQQTLFSAF GHDFSWRDIILMGGGAFLIAKATQEMHGALEGEDELEADDGPGTYAQRAFLAVVAQVILLDLVFSVDSILTAIGMAEHLA IMVLAVIIAVSIMFAASGPLSAFIAAHPTTKMLALAFLVLIGVTLVADGFGAHIPKGYIYAAMAFSVMVEMLNVAASGRR RRRIAARHAEEQQ
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=248, Percent_Identity=47.5806451612903, Blast_Score=233, Evalue=9e-63, Organism=Escherichia coli, GI87082033, Length=252, Percent_Identity=47.6190476190476, Blast_Score=233, Evalue=1e-62, Organism=Escherichia coli, GI1789197, Length=237, Percent_Identity=48.9451476793249, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 27096; Mature: 27096
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDWITSPEAWAALVTLTAMEIILGIDNVVFISLVVQKLPPAQALRARQVGLSAALILRI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ALLFALTWLIGLQQTLFSAFGHDFSWRDIILMGGGAFLIAKATQEMHGALEGEDELEADD HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCCCCCC GPGTYAQRAFLAVVAQVILLDLVFSVDSILTAIGMAEHLAIMVLAVIIAVSIMFAASGPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH SAFIAAHPTTKMLALAFLVLIGVTLVADGFGAHIPKGYIYAAMAFSVMVEMLNVAASGRR HHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHH RRRIAARHAEEQQ HHHHHHHHHCCCC >Mature Secondary Structure MLDWITSPEAWAALVTLTAMEIILGIDNVVFISLVVQKLPPAQALRARQVGLSAALILRI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ALLFALTWLIGLQQTLFSAFGHDFSWRDIILMGGGAFLIAKATQEMHGALEGEDELEADD HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCCCCCC GPGTYAQRAFLAVVAQVILLDLVFSVDSILTAIGMAEHLAIMVLAVIIAVSIMFAASGPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH SAFIAAHPTTKMLALAFLVLIGVTLVADGFGAHIPKGYIYAAMAFSVMVEMLNVAASGRR HHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHH RRRIAARHAEEQQ HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]