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The map label for this gene is bexD [H]

Identifier: 154247743

GI number: 154247743

Start: 4236433

End: 4237647

Strand: Reverse

Name: bexD [H]

Synonym: Xaut_3820

Alternate gene names: 154247743

Gene position: 4237647-4236433 (Counterclockwise)

Preceding gene: 154247751

Following gene: 154247742

Centisome position: 79.82

GC content: 68.56

Gene sequence:

>1215_bases
ATGGATGCCTGCGGCATGTATAACTGCCCCACTCTTTGTCGGGCGTATCAGAAGCGGAATCGAATGACGGGCTGGGTTCG
GTTTGTCGCCATGGGCCTCCTCGCCGGGGCAGCAGCCGGTTGCACGGTGCTGCCGTCGTCGGGGCCGTCGCGCACCGAAA
TCGAGATGCAGCAGCCCGAAGATGACCAGCGCTACCTGCTCATCGACGTGGACGACCGCACCCTGCACCTGATGCAGCAG
CAGCGCCCGGCCAGCTTCGGCGTCCGCTTCGGCGACTATCGCCCGCCGGGCCGCTACGTGGTGGGCGTGGGCGATTCCAT
CTCCGTCACCATCTGGGAAGCCGCCGCCGGCGGTCTGTTCTCCGGCCCGGTCATCGACCGGCTGGGCACCGGATCGCGCA
GCGCCACCATTCCCGACCAGCAGGTGGCGCAGGACGGCTCCGTCACCGTGCCCTATGCCGGGCGCATCCAGGTGGCCGGC
AAGACCACCTCGCAGATCGAGCAGGCCGTGGTGGACCGCCTCACCGGCAAGGCCATCGAGCCGCAGGCCGTGGTGGTGGT
GACCCGCAGCGTCAGCAATTCCGCCACCGTGCTGGGCGAGGCCACCTCCGGCGCCATCGTGCCCCTCTCGCCCCGCGGCG
ACCGGGTGCTGGACGTGATCGCCGCCGCCGGCGGCATCAAGGTTCCGGCCCATGAGGTGTTCGTGCGCCTGAGCCGCGGC
AACGCCACCGTCACCCTGCCCCTGCAGCGGCTGCTCAACGATCCCAAGGAAGACGTTTACGTCCGCCCGCTGGACAAGAT
CGTCGTCATCCGCGACCCGCAGACCTTCACCGTGTTCGGCGCGGCGGGCAATCCCACCGTGGTTCCGTTCGATGCGGTGG
GCATCACGCTTGAGGAGGCGGTCGCGCGCGTCGGCGGCCTGGTGGACCACAGGGCCGACCCCTCGGGCGTCTATCTCATG
CGCCTCGAGCCGCTCGGCTTCGCCACCCAGCTGCGGCCCGATGCGCGGCCGCTTGAAGCCTACGGCTACGTGCGCGTGAT
CTATCGCTGGAACATGCGCGATCCCAACTTCATCTTCCTCGCGCGCGGCTTCCAGATCCGCAACAAGGACGCGATCTACG
TGGCCAACGCGCCGCTGTCGGATCTGCAGAAGATCACCTCCGTGTTCAATGCCGTCGCCCAGCCCGTGGCCACCACGGTG
GCGGTGGTGCCTTAG

Upstream 100 bases:

>100_bases
GCCGACCAACCCCTTGCGCGAAAGCGCCCTGCCGGGCCGCATCCACGCACCATGTTGCATAGCCGCAACGCTCTTTTAAA
CGTTGTACCGCTAGGTCGCT

Downstream 100 bases:

>100_bases
GGACGCGCCGGCCATGGTCTCCCCGGCGCCAGCGTCCAGCGAGATCCTGAAGGCAGGCTCCCCCGAGGTCGTGGTGGCCG
CCGCCCCGCGGTGGCCCGCG

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MDACGMYNCPTLCRAYQKRNRMTGWVRFVAMGLLAGAAAGCTVLPSSGPSRTEIEMQQPEDDQRYLLIDVDDRTLHLMQQ
QRPASFGVRFGDYRPPGRYVVGVGDSISVTIWEAAAGGLFSGPVIDRLGTGSRSATIPDQQVAQDGSVTVPYAGRIQVAG
KTTSQIEQAVVDRLTGKAIEPQAVVVVTRSVSNSATVLGEATSGAIVPLSPRGDRVLDVIAAAGGIKVPAHEVFVRLSRG
NATVTLPLQRLLNDPKEDVYVRPLDKIVVIRDPQTFTVFGAAGNPTVVPFDAVGITLEEAVARVGGLVDHRADPSGVYLM
RLEPLGFATQLRPDARPLEAYGYVRVIYRWNMRDPNFIFLARGFQIRNKDAIYVANAPLSDLQKITSVFNAVAQPVATTV
AVVP

Sequences:

>Translated_404_residues
MDACGMYNCPTLCRAYQKRNRMTGWVRFVAMGLLAGAAAGCTVLPSSGPSRTEIEMQQPEDDQRYLLIDVDDRTLHLMQQ
QRPASFGVRFGDYRPPGRYVVGVGDSISVTIWEAAAGGLFSGPVIDRLGTGSRSATIPDQQVAQDGSVTVPYAGRIQVAG
KTTSQIEQAVVDRLTGKAIEPQAVVVVTRSVSNSATVLGEATSGAIVPLSPRGDRVLDVIAAAGGIKVPAHEVFVRLSRG
NATVTLPLQRLLNDPKEDVYVRPLDKIVVIRDPQTFTVFGAAGNPTVVPFDAVGITLEEAVARVGGLVDHRADPSGVYLM
RLEPLGFATQLRPDARPLEAYGYVRVIYRWNMRDPNFIFLARGFQIRNKDAIYVANAPLSDLQKITSVFNAVAQPVATTV
AVVP
>Mature_404_residues
MDACGMYNCPTLCRAYQKRNRMTGWVRFVAMGLLAGAAAGCTVLPSSGPSRTEIEMQQPEDDQRYLLIDVDDRTLHLMQQ
QRPASFGVRFGDYRPPGRYVVGVGDSISVTIWEAAAGGLFSGPVIDRLGTGSRSATIPDQQVAQDGSVTVPYAGRIQVAG
KTTSQIEQAVVDRLTGKAIEPQAVVVVTRSVSNSATVLGEATSGAIVPLSPRGDRVLDVIAAAGGIKVPAHEVFVRLSRG
NATVTLPLQRLLNDPKEDVYVRPLDKIVVIRDPQTFTVFGAAGNPTVVPFDAVGITLEEAVARVGGLVDHRADPSGVYLM
RLEPLGFATQLRPDARPLEAYGYVRVIYRWNMRDPNFIFLARGFQIRNKDAIYVANAPLSDLQKITSVFNAVAQPVATTV
AVVP

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=378, Percent_Identity=26.7195767195767, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI1788376, Length=364, Percent_Identity=25.8241758241758, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 43531; Mature: 43531

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDACGMYNCPTLCRAYQKRNRMTGWVRFVAMGLLAGAAAGCTVLPSSGPSRTEIEMQQPE
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCC
DDQRYLLIDVDDRTLHLMQQQRPASFGVRFGDYRPPGRYVVGVGDSISVTIWEAAAGGLF
CCCCEEEEEECCHHHHHHHHCCCHHCCCEECCCCCCCCEEEEECCCEEEEEEECCCCCCC
SGPVIDRLGTGSRSATIPDQQVAQDGSVTVPYAGRIQVAGKTTSQIEQAVVDRLTGKAIE
CCCHHHHCCCCCCCCCCCHHHHCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCC
PQAVVVVTRSVSNSATVLGEATSGAIVPLSPRGDRVLDVIAAAGGIKVPAHEVFVRLSRG
CCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHEEEEEECC
NATVTLPLQRLLNDPKEDVYVRPLDKIVVIRDPQTFTVFGAAGNPTVVPFDAVGITLEEA
CEEEEEEHHHHHCCCCCCEEEEECCEEEEEECCCEEEEEECCCCCCEEEEHHHCCCHHHH
VARVGGLVDHRADPSGVYLMRLEPLGFATQLRPDARPLEAYGYVRVIYRWNMRDPNFIFL
HHHHCCHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCEEEE
ARGFQIRNKDAIYVANAPLSDLQKITSVFNAVAQPVATTVAVVP
EECEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MDACGMYNCPTLCRAYQKRNRMTGWVRFVAMGLLAGAAAGCTVLPSSGPSRTEIEMQQPE
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCC
DDQRYLLIDVDDRTLHLMQQQRPASFGVRFGDYRPPGRYVVGVGDSISVTIWEAAAGGLF
CCCCEEEEEECCHHHHHHHHCCCHHCCCEECCCCCCCCEEEEECCCEEEEEEECCCCCCC
SGPVIDRLGTGSRSATIPDQQVAQDGSVTVPYAGRIQVAGKTTSQIEQAVVDRLTGKAIE
CCCHHHHCCCCCCCCCCCHHHHCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCC
PQAVVVVTRSVSNSATVLGEATSGAIVPLSPRGDRVLDVIAAAGGIKVPAHEVFVRLSRG
CCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHEEEEEECC
NATVTLPLQRLLNDPKEDVYVRPLDKIVVIRDPQTFTVFGAAGNPTVVPFDAVGITLEEA
CEEEEEEHHHHHCCCCCCEEEEECCEEEEEECCCEEEEEECCCCCCEEEEHHHCCCHHHH
VARVGGLVDHRADPSGVYLMRLEPLGFATQLRPDARPLEAYGYVRVIYRWNMRDPNFIFL
HHHHCCHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCEEEE
ARGFQIRNKDAIYVANAPLSDLQKITSVFNAVAQPVATTVAVVP
EECEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]