| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247145
Identifier: 154247145
GI number: 154247145
Start: 3563903
End: 3565189
Strand: Direct
Name: 154247145
Synonym: Xaut_3217
Alternate gene names: NA
Gene position: 3563903-3565189 (Clockwise)
Preceding gene: 154247142
Following gene: 154247146
Centisome position: 67.13
GC content: 71.64
Gene sequence:
>1287_bases ATGCGCAACCTTCCTTTGTCCCGAGCCGGGCGTCTCGCCCTCGTTGCCACCCTCGGGCTGCTTGCGCCCGCCACCGCGCG AGCCGCCGACCGCTACATGGCGACAGGGCTGCCCTTCTTCGATCCCTACCACGTGGCCATCGCCAGCATCGACGTGGCCG ACGGCAAGGTCACGGGCACCCTCGCCGCCCCCACGGGCGATCCGCGCCCGGCGCTGCCGCTCTCCGGCACGCTGGCCAAC GGGGTGCTCACCCTCACCGTGGGGCAGGGGGCGGAGGCCTACCGCTTCGTCTTCAGCGAGAACGAGCGGGGCCTCCACCG CATCTTCGAGGAGACGACCAGCATCCCCGGCATCGATCAGGTCACCCTGTTCCGCCCCCCGGCGGGCTTCTCCGAGCCGG CGCTGGCGCTGCAGCATGATCCGGAGGACTGGTGCGGACGCGTCTACGGCGGGCTTTCCGTCCAGTTCCGCGCCAAGGAC CTGGCGGCGACCGCCGAGGCGCCCGCAGCGGTGGCCGACCTCGACCTCGTGGTGGTGCCGCAGCAGGGCGGCACGGCGAC GCAGAAGCTGAAGGACGCCTGGAGCCGCCTGCGCCTTGCGGCGCGGGGCGGAGACGACGTTTCCGTGGACATCGCCGTGC CGGTGGGCAGCGAGGCGAAGCATGCCGAGGACCTGCGCCGCCTGCCTCAGGTCTCTGCCGTGATGCTGCCGGCGCTGTGC GGCGAGATGGCCCTCGCCACCATTCCCCGCGCCCGCGTCGCGGAAGGGAGCACGGTGTCCGAAGCGAAGCTTAAATCCTA TGCCGAAGCCATGCTGTCGCGCCTTTTGTCCGGCGCGGCGCCGGAGGCGTCGGCCGCCGGGCCGCGCAAGTTCAAGCTCG CCGGCGCCGTGGTGCCCGGCGTGTCCGGTCCCGCCTTCAAGGCGACCGTGACCGGGGAGGCGGAGGCGACGCGCCTCGGC AAGGGCAGCGTCGACCAGTTCACCCTGACCCTTGAGCCGGTGGTGACGCCGGACGATGCGGCCGACACCCTCTCGCTCAT CCCCACCGTCACCGACCTGAAGAGCGCCCGGAAGGCAGGTCCGCAGCCGCCCGCCGACGCCGCCTTCCGCCCGGCGGACG ATTCCAGCCAGGTGGCCGGCATCACCCAGCGCATCGTCTCCTTTATCGCCGCGGCCGAGGGCACGCGCTGCGCCTTCCTC ACCCAGACCGCGTTCGACGAGCCCGATGGCGCTCTCTCCTGCACCAACATCGCGATCGATGACGTGAGCCACCCTGACGA GAATTGA
Upstream 100 bases:
>100_bases CACGCCAGGCATTGCCCCCTGGGTCTGCCGCCTTGGGTCCGCCGCTTTGCCGATGATATAGAGCGGGCCGAACGCGGCAG TGCCACAGAGGCGGCGAATC
Downstream 100 bases:
>100_bases GGGTGAAGCCGGTCTGGCCGAGCCAGGTGTAGGTTTGGTGCAGAAATACCCTATTTAATGAACGCTTAACAGCGCGACCG CTACTGTATTTTCTCCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MRNLPLSRAGRLALVATLGLLAPATARAADRYMATGLPFFDPYHVAIASIDVADGKVTGTLAAPTGDPRPALPLSGTLAN GVLTLTVGQGAEAYRFVFSENERGLHRIFEETTSIPGIDQVTLFRPPAGFSEPALALQHDPEDWCGRVYGGLSVQFRAKD LAATAEAPAAVADLDLVVVPQQGGTATQKLKDAWSRLRLAARGGDDVSVDIAVPVGSEAKHAEDLRRLPQVSAVMLPALC GEMALATIPRARVAEGSTVSEAKLKSYAEAMLSRLLSGAAPEASAAGPRKFKLAGAVVPGVSGPAFKATVTGEAEATRLG KGSVDQFTLTLEPVVTPDDAADTLSLIPTVTDLKSARKAGPQPPADAAFRPADDSSQVAGITQRIVSFIAAAEGTRCAFL TQTAFDEPDGALSCTNIAIDDVSHPDEN
Sequences:
>Translated_428_residues MRNLPLSRAGRLALVATLGLLAPATARAADRYMATGLPFFDPYHVAIASIDVADGKVTGTLAAPTGDPRPALPLSGTLAN GVLTLTVGQGAEAYRFVFSENERGLHRIFEETTSIPGIDQVTLFRPPAGFSEPALALQHDPEDWCGRVYGGLSVQFRAKD LAATAEAPAAVADLDLVVVPQQGGTATQKLKDAWSRLRLAARGGDDVSVDIAVPVGSEAKHAEDLRRLPQVSAVMLPALC GEMALATIPRARVAEGSTVSEAKLKSYAEAMLSRLLSGAAPEASAAGPRKFKLAGAVVPGVSGPAFKATVTGEAEATRLG KGSVDQFTLTLEPVVTPDDAADTLSLIPTVTDLKSARKAGPQPPADAAFRPADDSSQVAGITQRIVSFIAAAEGTRCAFL TQTAFDEPDGALSCTNIAIDDVSHPDEN >Mature_428_residues MRNLPLSRAGRLALVATLGLLAPATARAADRYMATGLPFFDPYHVAIASIDVADGKVTGTLAAPTGDPRPALPLSGTLAN GVLTLTVGQGAEAYRFVFSENERGLHRIFEETTSIPGIDQVTLFRPPAGFSEPALALQHDPEDWCGRVYGGLSVQFRAKD LAATAEAPAAVADLDLVVVPQQGGTATQKLKDAWSRLRLAARGGDDVSVDIAVPVGSEAKHAEDLRRLPQVSAVMLPALC GEMALATIPRARVAEGSTVSEAKLKSYAEAMLSRLLSGAAPEASAAGPRKFKLAGAVVPGVSGPAFKATVTGEAEATRLG KGSVDQFTLTLEPVVTPDDAADTLSLIPTVTDLKSARKAGPQPPADAAFRPADDSSQVAGITQRIVSFIAAAEGTRCAFL TQTAFDEPDGALSCTNIAIDDVSHPDEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44410; Mature: 44410
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLPLSRAGRLALVATLGLLAPATARAADRYMATGLPFFDPYHVAIASIDVADGKVTGT CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEE LAAPTGDPRPALPLSGTLANGVLTLTVGQGAEAYRFVFSENERGLHRIFEETTSIPGIDQ EECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCE VTLFRPPAGFSEPALALQHDPEDWCGRVYGGLSVQFRAKDLAATAEAPAAVADLDLVVVP EEEECCCCCCCCCCEEECCCCHHHHHHHHCCEEEEEEHHHHHHCCCCCCEEECEEEEEEE QQGGTATQKLKDAWSRLRLAARGGDDVSVDIAVPVGSEAKHAEDLRRLPQVSAVMLPALC CCCCHHHHHHHHHHHHHEEHCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHH GEMALATIPRARVAEGSTVSEAKLKSYAEAMLSRLLSGAAPEASAAGPRKFKLAGAVVPG HHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCC VSGPAFKATVTGEAEATRLGKGSVDQFTLTLEPVVTPDDAADTLSLIPTVTDLKSARKAG CCCCCEEEEECCCHHHHCCCCCCCCEEEEEEECEECCCCCHHHHHHHCCHHHHHHHHHCC PQPPADAAFRPADDSSQVAGITQRIVSFIAAAEGTRCAFLTQTAFDEPDGALSCTNIAID CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEE DVSHPDEN CCCCCCCC >Mature Secondary Structure MRNLPLSRAGRLALVATLGLLAPATARAADRYMATGLPFFDPYHVAIASIDVADGKVTGT CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEE LAAPTGDPRPALPLSGTLANGVLTLTVGQGAEAYRFVFSENERGLHRIFEETTSIPGIDQ EECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCE VTLFRPPAGFSEPALALQHDPEDWCGRVYGGLSVQFRAKDLAATAEAPAAVADLDLVVVP EEEECCCCCCCCCCEEECCCCHHHHHHHHCCEEEEEEHHHHHHCCCCCCEEECEEEEEEE QQGGTATQKLKDAWSRLRLAARGGDDVSVDIAVPVGSEAKHAEDLRRLPQVSAVMLPALC CCCCHHHHHHHHHHHHHEEHCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHH GEMALATIPRARVAEGSTVSEAKLKSYAEAMLSRLLSGAAPEASAAGPRKFKLAGAVVPG HHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCC VSGPAFKATVTGEAEATRLGKGSVDQFTLTLEPVVTPDDAADTLSLIPTVTDLKSARKAG CCCCCEEEEECCCHHHHCCCCCCCCEEEEEEECEECCCCCHHHHHHHCCHHHHHHHHHCC PQPPADAAFRPADDSSQVAGITQRIVSFIAAAEGTRCAFLTQTAFDEPDGALSCTNIAID CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEE DVSHPDEN CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA