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The map label for this gene is yciF [H]

Identifier: 154247146

GI number: 154247146

Start: 3565732

End: 3566235

Strand: Direct

Name: yciF [H]

Synonym: Xaut_3218

Alternate gene names: 154247146

Gene position: 3565732-3566235 (Clockwise)

Preceding gene: 154247145

Following gene: 154247148

Centisome position: 67.16

GC content: 66.47

Gene sequence:

>504_bases
ATGGGCTTCTTTTCCAAAGACATCCATTCGCTCGACGATCTCTTCGTGCACACGCTGCGCGACATCTATTACGCCGAAAA
GCGCATTCTGAAGGCGCTGCCCACCATGGTGGAGAAAGCCTCGAGCGCGACCCTGCGCCAGGCATTCCAGTCCCACCTGG
GCGAGACCGAGGGGCATGTGAGGCGCCTGGAGGAGGTGTTCCGCATGCATGGCGTCGAGGCCAGCCCGGTGAAATGCCCG
GCCATCGACGGCATCATCGCCGAGGCCGAGGAGGTGGCGTCCGAGGTGGCCGATCCCGAGGTGCTGGATGCGGCGCTGGC
TGCCGCGGCGCAGGCGGTCGAGCATTACGAGATCACCCGCTACGGCACCCTCGTCGCCTGGGCCAAGCGTCTCGGCCGCA
ATGACTGCGCCACCCTGCTCCAGCGCACCCTCGACGAGGAGAAGGCGACCGACGCCAAGCTCACCGGCCTCGCCGAGACC
CAGGTCAACATGCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
GCCGCAAGCCAGGCGCGCGCTGACGCCTGTCCGCGTTGAGAATTCGGGCGGCGCGCGCCGCCTGAAATCCGCGGCCATCC
ACAGACATCAGGAGACAGAC

Downstream 100 bases:

>100_bases
CAAGACCGCGGCCGGCGCCTTCCGTCCCCCCGGGCAGGCACCGCATCTCTCCCTCCCGCGGGGAGAATCCCACTCGCCCC
CGCCGCACCCGCGGCGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MGFFSKDIHSLDDLFVHTLRDIYYAEKRILKALPTMVEKASSATLRQAFQSHLGETEGHVRRLEEVFRMHGVEASPVKCP
AIDGIIAEAEEVASEVADPEVLDAALAAAAQAVEHYEITRYGTLVAWAKRLGRNDCATLLQRTLDEEKATDAKLTGLAET
QVNMRAA

Sequences:

>Translated_167_residues
MGFFSKDIHSLDDLFVHTLRDIYYAEKRILKALPTMVEKASSATLRQAFQSHLGETEGHVRRLEEVFRMHGVEASPVKCP
AIDGIIAEAEEVASEVADPEVLDAALAAAAQAVEHYEITRYGTLVAWAKRLGRNDCATLLQRTLDEEKATDAKLTGLAET
QVNMRAA
>Mature_166_residues
GFFSKDIHSLDDLFVHTLRDIYYAEKRILKALPTMVEKASSATLRQAFQSHLGETEGHVRRLEEVFRMHGVEASPVKCPA
IDGIIAEAEEVASEVADPEVLDAALAAAAQAVEHYEITRYGTLVAWAKRLGRNDCATLLQRTLDEEKATDAKLTGLAETQ
VNMRAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=161, Percent_Identity=45.9627329192547, Blast_Score=140, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18425; Mature: 18294

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFSKDIHSLDDLFVHTLRDIYYAEKRILKALPTMVEKASSATLRQAFQSHLGETEGHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RRLEEVFRMHGVEASPVKCPAIDGIIAEAEEVASEVADPEVLDAALAAAAQAVEHYEITR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YGTLVAWAKRLGRNDCATLLQRTLDEEKATDAKLTGLAETQVNMRAA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFFSKDIHSLDDLFVHTLRDIYYAEKRILKALPTMVEKASSATLRQAFQSHLGETEGHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RRLEEVFRMHGVEASPVKCPAIDGIIAEAEEVASEVADPEVLDAALAAAAQAVEHYEITR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YGTLVAWAKRLGRNDCATLLQRTLDEEKATDAKLTGLAETQVNMRAA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]