Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154247086

Identifier: 154247086

GI number: 154247086

Start: 3505063

End: 3505812

Strand: Reverse

Name: 154247086

Synonym: Xaut_3157

Alternate gene names: NA

Gene position: 3505812-3505063 (Counterclockwise)

Preceding gene: 154247094

Following gene: 154247085

Centisome position: 66.04

GC content: 74.53

Gene sequence:

>750_bases
ATGATCGCCCCACGCCTTCCCGTCCTCGCGCTGGTCGCGATCCTTCTTGCGCCAGGCGCGGCACAGGCCATCATGGGCGG
CGGGCCGGCGGCGGCGGAGGTGGCGGCGCAGACGGTGCTCATCGTCTCCACCCGCGGCGCCTCCTGCACCGGCGCGGTAC
TGGCGCCCGATCTCGTGCTCACCGCCGCCCATTGCGTGGCGCCGGCGTCGGACTATGCGGTGGCCATCATCGGCGACGGA
CCGCCGAAGCTCGTGCCGGCCAAGCGCATCGCCGTGCATCCGCGCTTCGATGCCGGCCAGTTCCAGATCCACCGGCCGAC
CCCCGACCTCGCCCTTGTGAAGCTTGCAGAACCCCTGCCCGGCCGCTTCCGCACCGCGCGGCTCGCCAGCGCCGACGGCC
TGCCCGAGAAGGGCACCCCCTTCCTGCTCGCCGGCTATGGCGTCGTTGCCGACGGCCAGGGCAAGAGCGCCGGCACGCTG
CGCACGGTGGCGCTGTCCTCCATCGGCATCACCGGCGGCATCATGGTGCGCCTCTCGGCGCCGGAGGGCGCGGCCGGCGC
CTGCACCGGAGATTCAGGCGGCCCCGCCTTCCGTGACGGGGCGGTGGCGGGCGTCACTGGCTGGGCCACCGGGCCGGGGG
GCAGCCGCGGCTGCGGCGGCGTCACCGGCGTGACCCTGGTGTCGCTCCATCGCGACTGGATCGAGGCCACCGCGAAGAGC
CTCGGCAGCCCGCTCGGCAGCGGGAGATAG

Upstream 100 bases:

>100_bases
TCCGACGCGCTGTGACACAGGCGCATCGCCCCGCGCGGAAAGGAAATTCCCGGCCCTGCCCGCCATTGACGCACCGGGCG
GCGGGCGGCAGAAACGGGAG

Downstream 100 bases:

>100_bases
GGATGGCACCGGCCGCATCGCCCCGTTTTAGGCGCGCCGGCCGGATCATCGCTGCTGCCGTGCTCGCCCTTCTCGGCGCC
GGGCCGGCCTTCGGCCAGAG

Product: peptidase S1 and S6 chymotrypsin/Hap

Products: NA

Alternate protein names: Serine Protease; Trypsin Domain Lipoprotein; Peptidase; Secreted Trypsin-Like Serine Protease

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVLTAAHCVAPASDYAVAIIGDG
PPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLPGRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTL
RTVALSSIGITGGIMVRLSAPEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS
LGSPLGSGR

Sequences:

>Translated_249_residues
MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVLTAAHCVAPASDYAVAIIGDG
PPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLPGRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTL
RTVALSSIGITGGIMVRLSAPEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS
LGSPLGSGR
>Mature_249_residues
MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVLTAAHCVAPASDYAVAIIGDG
PPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLPGRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTL
RTVALSSIGITGGIMVRLSAPEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS
LGSPLGSGR

Specific function: Unknown

COG id: COG5640

COG function: function code O; Secreted trypsin-like serine protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21464127, Length=236, Percent_Identity=25.8474576271186, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI6005844, Length=236, Percent_Identity=25.8474576271186, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI209862865, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI5803199, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI21618357, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI145701030, Length=235, Percent_Identity=28.936170212766, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI291167775, Length=234, Percent_Identity=29.0598290598291, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI291167777, Length=234, Percent_Identity=29.0598290598291, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI15451940, Length=234, Percent_Identity=29.0598290598291, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI20302143, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI89142741, Length=241, Percent_Identity=24.896265560166, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582982, Length=213, Percent_Identity=32.8638497652582, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24653960, Length=244, Percent_Identity=27.8688524590164, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24645302, Length=276, Percent_Identity=26.4492753623188, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21357323, Length=186, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24473; Mature: 24473

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVL
CCCCCCHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHEEEEEEEECCCCCCCCHHHHHHHH
TAAHCVAPASDYAVAIIGDGPPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLP
HHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCCCCEEEEEECCCCC
GRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTLRTVALSSIGITGGIMVRLSA
CCHHEEEECCCCCCCCCCCCEEEECCEEEECCCCCCCCEEEEEEHHHCCCCCEEEEEEEC
PEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGSPLGSGR
HCCCCCCCC
>Mature Secondary Structure
MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVL
CCCCCCHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHEEEEEEEECCCCCCCCHHHHHHHH
TAAHCVAPASDYAVAIIGDGPPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLP
HHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCCCCEEEEEECCCCC
GRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTLRTVALSSIGITGGIMVRLSA
CCHHEEEECCCCCCCCCCCCEEEECCEEEECCCCCCCCEEEEEEHHHCCCCCEEEEEEEC
PEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGSPLGSGR
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA