| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is phbB [H]
Identifier: 154247036
GI number: 154247036
Start: 3446798
End: 3447520
Strand: Reverse
Name: phbB [H]
Synonym: Xaut_3107
Alternate gene names: 154247036
Gene position: 3447520-3446798 (Counterclockwise)
Preceding gene: 154247037
Following gene: 154247033
Centisome position: 64.94
GC content: 65.84
Gene sequence:
>723_bases ATGGGACGCGTCGCGTTGGTCACGGGCGGCACGCGGGGAATCGGCGAAGCGATCTCGGTGGCGCTGAAAGCCGCCGGCTA CAAGGTCGCTGCGAACTATGCCGGTAACGACGAGGCAGCCAAGGCGTTCACCGAGAAGACCGGCATTGCCGCCTTCAAGT GGGACGTGTCCGATTTCGAATCCTGCAAGGCAGGCATCGCCAAGGTGGAGGCCGAGCTCGGTCCGGTCGAAGTGCTGGTG AACAACGCCGGCATCACCCGCGACGGTCAGTTCCACAAGATGTCGCTGGAGCAGTGGAGCGCGGTGATCAACACCAACCT CAACTCCGCCTTCAACATGACCCGCCCGGTCATCGAGGGCATGCGCGAGCGCAAGTTCGGCCGCATCATCTGCATCTCGT CCATCAACGGGCAGAAGGGCCAGTTCGGCCAGACCAACTATTCGGCCGCCAAGGCCGGCGAGATCGGCTTCGTGAAGGCG CTCGCCCAGGAGAGCGCCCGCTTCGGCATCACGGTGAACGCCATCGCCCCCGGCTACATCGGCACCGAGATGGTGCGCGC CGTGCCGGCCGAGGCGCTGGCCAAGATCGTGGCGACCATCCCGGTGGGCCGTCTCGGCGAGCCGGAGGACATCGCCCGCG CCGTGGTGTTCCTTGCGTCCGACGACGCCGGCTTCATCAGCGGCTCGACCATGACGGTGAACGGCGCCCAGTACATCACC TGA
Upstream 100 bases:
>100_bases CGGAAATTGAGACTTGCTAAACCGCCGGAGCGTGGCTCGACCCGCTCCGGATCACGGGGGAAGTGTCGTCAGGTCGAGCC AATAGAGTGAGGAGGGAACC
Downstream 100 bases:
>100_bases GACCGACATCGGTTCCAGCACCGCAACACCGCCATGCCCCGGCTCGTCCGGGGCATGTGCGTTTTTGGGGGTCGTCGCGC GCCCTCACACCACCAGGGTC
Product: acetoacetyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGRVALVTGGTRGIGEAISVALKAAGYKVAANYAGNDEAAKAFTEKTGIAAFKWDVSDFESCKAGIAKVEAELGPVEVLV NNAGITRDGQFHKMSLEQWSAVINTNLNSAFNMTRPVIEGMRERKFGRIICISSINGQKGQFGQTNYSAAKAGEIGFVKA LAQESARFGITVNAIAPGYIGTEMVRAVPAEALAKIVATIPVGRLGEPEDIARAVVFLASDDAGFISGSTMTVNGAQYIT
Sequences:
>Translated_240_residues MGRVALVTGGTRGIGEAISVALKAAGYKVAANYAGNDEAAKAFTEKTGIAAFKWDVSDFESCKAGIAKVEAELGPVEVLV NNAGITRDGQFHKMSLEQWSAVINTNLNSAFNMTRPVIEGMRERKFGRIICISSINGQKGQFGQTNYSAAKAGEIGFVKA LAQESARFGITVNAIAPGYIGTEMVRAVPAEALAKIVATIPVGRLGEPEDIARAVVFLASDDAGFISGSTMTVNGAQYIT >Mature_239_residues GRVALVTGGTRGIGEAISVALKAAGYKVAANYAGNDEAAKAFTEKTGIAAFKWDVSDFESCKAGIAKVEAELGPVEVLVN NAGITRDGQFHKMSLEQWSAVINTNLNSAFNMTRPVIEGMRERKFGRIICISSINGQKGQFGQTNYSAAKAGEIGFVKAL AQESARFGITVNAIAPGYIGTEMVRAVPAEALAKIVATIPVGRLGEPEDIARAVVFLASDDAGFISGSTMTVNGAQYIT
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=39.3574297188755, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI40254992, Length=237, Percent_Identity=38.3966244725738, Blast_Score=145, Evalue=2e-35, Organism=Homo sapiens, GI4504505, Length=231, Percent_Identity=35.9307359307359, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=32.0987654320988, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI7705925, Length=238, Percent_Identity=30.672268907563, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI4758504, Length=253, Percent_Identity=30.0395256916996, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI4503817, Length=228, Percent_Identity=29.8245614035088, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI109715829, Length=233, Percent_Identity=30.0429184549356, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI66933014, Length=241, Percent_Identity=29.045643153527, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=28.4552845528455, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=30.46875, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI31542939, Length=251, Percent_Identity=29.0836653386454, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI7657478, Length=191, Percent_Identity=31.413612565445, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=30.3482587064677, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI5031737, Length=240, Percent_Identity=30, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI59889578, Length=199, Percent_Identity=30.1507537688442, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI126723750, Length=246, Percent_Identity=28.4552845528455, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI157739938, Length=149, Percent_Identity=29.5302013422819, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI83715985, Length=253, Percent_Identity=27.6679841897233, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI7706318, Length=191, Percent_Identity=29.8429319371728, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI226371731, Length=212, Percent_Identity=31.1320754716981, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI40807363, Length=219, Percent_Identity=26.4840182648402, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503301, Length=206, Percent_Identity=26.6990291262136, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI210032110, Length=211, Percent_Identity=26.5402843601896, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI142976729, Length=237, Percent_Identity=25.7383966244726, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI7705855, Length=198, Percent_Identity=29.2929292929293, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=47.0833333333333, Blast_Score=212, Evalue=2e-56, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=34.251968503937, Blast_Score=132, Evalue=1e-32, Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=33.6065573770492, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=31.2757201646091, Blast_Score=117, Evalue=5e-28, Organism=Escherichia coli, GI1789208, Length=239, Percent_Identity=32.6359832635983, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=29.4605809128631, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI2367365, Length=239, Percent_Identity=30.9623430962343, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=30.2040816326531, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=31.3807531380753, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=28.125, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787820, Length=223, Percent_Identity=31.8385650224215, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=27.2357723577236, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1787526, Length=240, Percent_Identity=26.25, Blast_Score=62, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147288, Length=239, Percent_Identity=42.6778242677824, Blast_Score=174, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17555706, Length=236, Percent_Identity=42.7966101694915, Blast_Score=164, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17568967, Length=230, Percent_Identity=29.1304347826087, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=32.520325203252, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17561402, Length=245, Percent_Identity=32.2448979591837, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=29.718875502008, Blast_Score=97, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=30, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17538182, Length=248, Percent_Identity=31.0483870967742, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI115534694, Length=240, Percent_Identity=29.5833333333333, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=30, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI193203117, Length=194, Percent_Identity=29.3814432989691, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17508651, Length=247, Percent_Identity=30.3643724696356, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=28.968253968254, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17559104, Length=255, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560150, Length=254, Percent_Identity=28.740157480315, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562990, Length=254, Percent_Identity=28.740157480315, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17562904, Length=255, Percent_Identity=27.843137254902, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=28.6821705426357, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=26.171875, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17544670, Length=258, Percent_Identity=24.8062015503876, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17561272, Length=197, Percent_Identity=28.4263959390863, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=27.9693486590038, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17564282, Length=200, Percent_Identity=25.5, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17563726, Length=255, Percent_Identity=28.2352941176471, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17538480, Length=257, Percent_Identity=26.8482490272374, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=27.34375, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=27.5590551181102, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17562908, Length=256, Percent_Identity=25.390625, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17567345, Length=191, Percent_Identity=26.1780104712042, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=27.2373540856031, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17560220, Length=257, Percent_Identity=27.2373540856031, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17560332, Length=257, Percent_Identity=28.7937743190661, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17565030, Length=255, Percent_Identity=27.4509803921569, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=231, Percent_Identity=34.6320346320346, Blast_Score=114, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324126, Length=247, Percent_Identity=29.1497975708502, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=39.4190871369295, Blast_Score=148, Evalue=4e-36, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=34.0080971659919, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=32.3770491803279, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=30.241935483871, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI21355319, Length=241, Percent_Identity=31.1203319502075, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI18859837, Length=188, Percent_Identity=35.1063829787234, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=31.6, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24643142, Length=239, Percent_Identity=29.7071129707113, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI116007236, Length=236, Percent_Identity=30.0847457627119, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24644337, Length=172, Percent_Identity=33.1395348837209, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=29.9212598425197, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355631, Length=168, Percent_Identity=32.7380952380952, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24649181, Length=189, Percent_Identity=30.1587301587302, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641232, Length=231, Percent_Identity=31.1688311688312, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007234, Length=232, Percent_Identity=30.6034482758621, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI21356301, Length=229, Percent_Identity=29.2576419213974, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI161076933, Length=190, Percent_Identity=30, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=30.1587301587302, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571387, Length=232, Percent_Identity=28.448275862069, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI116007238, Length=182, Percent_Identity=31.3186813186813, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24581726, Length=137, Percent_Identity=30.6569343065693, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21358495, Length=191, Percent_Identity=25.130890052356, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007232, Length=190, Percent_Identity=31.5789473684211, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011283 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.36 [H]
Molecular weight: Translated: 25156; Mature: 25025
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVALVTGGTRGIGEAISVALKAAGYKVAANYAGNDEAAKAFTEKTGIAAFKWDVSDFE CCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCHHHH SCKAGIAKVEAELGPVEVLVNNAGITRDGQFHKMSLEQWSAVINTNLNSAFNMTRPVIEG HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHH MRERKFGRIICISSINGQKGQFGQTNYSAAKAGEIGFVKALAQESARFGITVNAIAPGYI HHHCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCEEEEEECCCHH GTEMVRAVPAEALAKIVATIPVGRLGEPEDIARAVVFLASDDAGFISGSTMTVNGAQYIT HHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCCEEECCEEEECCCEECC >Mature Secondary Structure GRVALVTGGTRGIGEAISVALKAAGYKVAANYAGNDEAAKAFTEKTGIAAFKWDVSDFE CEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCHHHH SCKAGIAKVEAELGPVEVLVNNAGITRDGQFHKMSLEQWSAVINTNLNSAFNMTRPVIEG HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHH MRERKFGRIICISSINGQKGQFGQTNYSAAKAGEIGFVKALAQESARFGITVNAIAPGYI HHHCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCEEEEEECCCHH GTEMVRAVPAEALAKIVATIPVGRLGEPEDIARAVVFLASDDAGFISGSTMTVNGAQYIT HHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCCEEECCEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2546004; 3286259 [H]