Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is ttuD [H]

Identifier: 154247033

GI number: 154247033

Start: 3443752

End: 3445008

Strand: Reverse

Name: ttuD [H]

Synonym: Xaut_3104

Alternate gene names: 154247033

Gene position: 3445008-3443752 (Counterclockwise)

Preceding gene: 154247036

Following gene: 154247032

Centisome position: 64.89

GC content: 69.85

Gene sequence:

>1257_bases
ATGACCTCTGCGACCCTGTCCGACCGGGACATCCTCCTCGCTTTGTTCGATGCAGGGCTCGCCGCAGCGCTTCCGGAAGG
AAAGTTCAAGGATCACCTGCCCGCCCCGCCGAAGGGCCGCACCATTGTCATCGGCGCCGGCAAGGCCTCGGCCCGCATGG
CCCGCGCCTTCGAGGAAGAGTGGGGCCACCCATGCGAGGGGCTTATCGTCACCCGCTACGGCCATGGCTGCGAGACCCGC
CATATCGAGATCGTGGAAGCCTCCCACCCGGTACCGGACCAGGCCGGGCTCGACGCCGCCCGCCGCATCCTGGAGCTGGC
GAAGGGCGCGGGGCCGGACGATCTGGTGGTCTGCCTCATGTCGGGGGGCGCCTCCTCGCTCCTCACCATGCCGGCGGAGG
GTCTGACCCTGGCCGACAAGCAGGCGCTGAACGGCGCGTTGCTGAAATCCGGCGCGCCCATCGGCGTGATGAACCAGGTG
CGCAAATCGCTCTCCGCCATCAAGGGCGGGCGCCTTGCCGCCGCCATCGCCCCGGCGCGGGCGGTGACCTACCTCATCTC
CGACGTGCCGGGCGATGACCCCGGCACCATCGGCTCCGGCCCCACCATTCCCGAGGCCTCCGACCCGGAGGGCGTGCTCG
GCCTGATGCGCGCGTGGGGCATCGAGGTGACGGACAAGCTGGAGCAGGTCATCCGCGCCAACACCGTCCCCGGCGATGCC
CTCCCCGGCCAGGAGGTGCACATGATTGCCACCCCGCTGATGGCGCTGAAAGCGGCGGAGGCGAAGGCGCGCGAACTCGG
CATCACCCCCCTCATCCTCGGCGACGCGATCGAGGGCGAGGCGCGGGAGGCCGCCATCGTGTTCGCCGGCATCGCCAATT
GCACCGCCTCCCACGGGCTTCCGGCGGCCGCGCCCTGCGTGCTGCTGTCCGGCGGCGAGACCACCGTGACCGTGCGCGGC
AAGGGAAGGGGCGGACGCAGCGTGGAATTCCTGTTGGCCCTCGCCATCGCGCTGAAGGGCCGGGCCGGCATCTCCGCCGT
CTCCTGCGATACGGACGGGGTGGACGGCACCGAGGACAATGCCGGCGCGTGGTTCGACGCCGCTATCCTGGAAGAGGCCG
CTGCGCGCGGGCTGAAGCCCGCCGACTTCCTCGCCAACAATGACGGCTACAGCTTCTTCTCCGCCCTCGACCGGCTAGTG
ATCACCGGCCCGACCTTGACGAACGTCAATGATTTCAGGGCGATCCTTGTGCGATAG

Upstream 100 bases:

>100_bases
TGCCTTTCGTTTCCGGCTTATTGATCCCTTCCCGGGGGCCGGTTACAGCCGGGCCTGAAATGAATGAATGGCCCCAAAAG
GCGGGCCGCGGGAGAACGCC

Downstream 100 bases:

>100_bases
ACGCTGCCCCGGTTTCATTGCGGCGGGGCTGTGGCCAAGGCCTGCCCCTGCGGCGCAGCCGCGCTGCGCTGCGCGCATAC
CGCGTCTTTTTCACATAAAA

Product: hydroxypyruvate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTSATLSDRDILLALFDAGLAAALPEGKFKDHLPAPPKGRTIVIGAGKASARMARAFEEEWGHPCEGLIVTRYGHGCETR
HIEIVEASHPVPDQAGLDAARRILELAKGAGPDDLVVCLMSGGASSLLTMPAEGLTLADKQALNGALLKSGAPIGVMNQV
RKSLSAIKGGRLAAAIAPARAVTYLISDVPGDDPGTIGSGPTIPEASDPEGVLGLMRAWGIEVTDKLEQVIRANTVPGDA
LPGQEVHMIATPLMALKAAEAKARELGITPLILGDAIEGEAREAAIVFAGIANCTASHGLPAAAPCVLLSGGETTVTVRG
KGRGGRSVEFLLALAIALKGRAGISAVSCDTDGVDGTEDNAGAWFDAAILEEAAARGLKPADFLANNDGYSFFSALDRLV
ITGPTLTNVNDFRAILVR

Sequences:

>Translated_418_residues
MTSATLSDRDILLALFDAGLAAALPEGKFKDHLPAPPKGRTIVIGAGKASARMARAFEEEWGHPCEGLIVTRYGHGCETR
HIEIVEASHPVPDQAGLDAARRILELAKGAGPDDLVVCLMSGGASSLLTMPAEGLTLADKQALNGALLKSGAPIGVMNQV
RKSLSAIKGGRLAAAIAPARAVTYLISDVPGDDPGTIGSGPTIPEASDPEGVLGLMRAWGIEVTDKLEQVIRANTVPGDA
LPGQEVHMIATPLMALKAAEAKARELGITPLILGDAIEGEAREAAIVFAGIANCTASHGLPAAAPCVLLSGGETTVTVRG
KGRGGRSVEFLLALAIALKGRAGISAVSCDTDGVDGTEDNAGAWFDAAILEEAAARGLKPADFLANNDGYSFFSALDRLV
ITGPTLTNVNDFRAILVR
>Mature_417_residues
TSATLSDRDILLALFDAGLAAALPEGKFKDHLPAPPKGRTIVIGAGKASARMARAFEEEWGHPCEGLIVTRYGHGCETRH
IEIVEASHPVPDQAGLDAARRILELAKGAGPDDLVVCLMSGGASSLLTMPAEGLTLADKQALNGALLKSGAPIGVMNQVR
KSLSAIKGGRLAAAIAPARAVTYLISDVPGDDPGTIGSGPTIPEASDPEGVLGLMRAWGIEVTDKLEQVIRANTVPGDAL
PGQEVHMIATPLMALKAAEAKARELGITPLILGDAIEGEAREAAIVFAGIANCTASHGLPAAAPCVLLSGGETTVTVRGK
GRGGRSVEFLLALAIALKGRAGISAVSCDTDGVDGTEDNAGAWFDAAILEEAAARGLKPADFLANNDGYSFFSALDRLVI
TGPTLTNVNDFRAILVR

Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]

COG id: COG2379

COG function: function code G; Putative glycerate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543063, Length=481, Percent_Identity=31.3929313929314, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI193205461, Length=412, Percent_Identity=30.0970873786408, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI19920578, Length=374, Percent_Identity=31.8181818181818, Blast_Score=150, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007835 [H]

Pfam domain/function: PF05161 MOFRL [H]

EC number: =1.1.1.81 [H]

Molecular weight: Translated: 42979; Mature: 42847

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSATLSDRDILLALFDAGLAAALPEGKFKDHLPAPPKGRTIVIGAGKASARMARAFEEE
CCCCCCCCCCEEEEEHHCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
WGHPCEGLIVTRYGHGCETRHIEIVEASHPVPDQAGLDAARRILELAKGAGPDDLVVCLM
HCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
SGGASSLLTMPAEGLTLADKQALNGALLKSGAPIGVMNQVRKSLSAIKGGRLAAAIAPAR
CCCCCCEEECCCCCCEEHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHH
AVTYLISDVPGDDPGTIGSGPTIPEASDPEGVLGLMRAWGIEVTDKLEQVIRANTVPGDA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
LPGQEVHMIATPLMALKAAEAKARELGITPLILGDAIEGEAREAAIVFAGIANCTASHGL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEHHHHHHCCCC
PAAAPCVLLSGGETTVTVRGKGRGGRSVEFLLALAIALKGRAGISAVSCDTDGVDGTEDN
CCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
AGAWFDAAILEEAAARGLKPADFLANNDGYSFFSALDRLVITGPTLTNVNDFRAILVR
CCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHEECCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
TSATLSDRDILLALFDAGLAAALPEGKFKDHLPAPPKGRTIVIGAGKASARMARAFEEE
CCCCCCCCCEEEEEHHCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
WGHPCEGLIVTRYGHGCETRHIEIVEASHPVPDQAGLDAARRILELAKGAGPDDLVVCLM
HCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
SGGASSLLTMPAEGLTLADKQALNGALLKSGAPIGVMNQVRKSLSAIKGGRLAAAIAPAR
CCCCCCEEECCCCCCEEHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHH
AVTYLISDVPGDDPGTIGSGPTIPEASDPEGVLGLMRAWGIEVTDKLEQVIRANTVPGDA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
LPGQEVHMIATPLMALKAAEAKARELGITPLILGDAIEGEAREAAIVFAGIANCTASHGL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEHHHHHHCCCC
PAAAPCVLLSGGETTVTVRGKGRGGRSVEFLLALAIALKGRAGISAVSCDTDGVDGTEDN
CCCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
AGAWFDAAILEEAAARGLKPADFLANNDGYSFFSALDRLVITGPTLTNVNDFRAILVR
CCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHEECCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]