| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fabH [H]
Identifier: 154246856
GI number: 154246856
Start: 3244303
End: 3245292
Strand: Direct
Name: fabH [H]
Synonym: Xaut_2921
Alternate gene names: 154246856
Gene position: 3244303-3245292 (Clockwise)
Preceding gene: 154246855
Following gene: 154246862
Centisome position: 61.11
GC content: 72.53
Gene sequence:
>990_bases ATGACACGGACACCCGTGGCGGGAACCCGCATCGCCGGCTTCGGCCACTACGCACCAGAGCAGGTGGTGACGAGCGTTGA GATCGAGCGTGGGCTGGGCCTTACGGAGGGGTGGATCGTCGGCCGCACCGGCATCCGTGAACGGCGGGTGGCGGCGCCGC ACGAGGCGGTGAGCGACCTTGCCTTCGCGGCCGCCGAAAAGGCGCTGGCCGATGCGGGGATCCCCAAGGCCGCCATCGGC CTGACCCTGCTGGCCACTAGCACGCCGGATCACCTGCTGCCGCCCACCGCGCCGCTGCTCGCCCACCGCCTCGGCCTGCC GGCGAGCGGCGCGGTGGACCTGACGGGGGCCTGCGCCGGCTTCCTCTATGCTCTGGTGCTGGCCGATGGCTTCGTGCGGA CCACGGGACGCGCGGTGCTGGTGGCGGCGGCCAACATCCTGTCGCGCCGTGTGGATCCATCGGATCCATCGACAGCGGCG CTGTTTGCCGATGCGGCCGGCGCGGTGGTGCTGGCCCCATCCCCCCGGGAGGGGGCCGGTGTGGTCGGGTCTTGCCTTGC CTCCGACGGATCGGGCTACGACCTCATCCAGATCCCCGACAGCGGCAGCCGCCTGTCGGCGACGGGGCAGGCGGGGGCCG GGCGGATGGTGATGCGGGAGGGGCGCACGGTGTTTTCCCGGGCGGTGGCCATGATGGCCTCCTCCTGCCGCACCGCGCTG GAGGAGGCCGGGCTCACCCTGGACGATGTGACCCATTTCCTGCCGCACCAGGCCAACGCCCGCATCATCACGGCGGTGGC GGAGCGGCTCGGCATCAGCCCGGAGCGGACCCTGTCGAGCGTCGCCGACTATGGCAATTCGTCCGCCGCCACCGTGCCCT TCACGCTGTCGGCGCTGCGCGCCACCCGCGCCTATGGCGCGGGCGACGTGCTGCTGATTGCCGCCGCCGGCGCCGGCCTC ACGGGCGGCGCGGCTGTTTTTCGATTCTAG
Upstream 100 bases:
>100_bases CGCTGTATGTGATGCCGCCCTATTGCACCACGGCCGAGGACCTCGACCTCGTCTACGGGGCCATCGCCACCGCCGCCGAC CGCTTCGGGCGGGCTTGAGC
Downstream 100 bases:
>100_bases CTCGGCTCAGGGCTTGAACGCGGCGCAGGCGATGCGCGCGCCGGCACCACCGATGGGCTGGGTGGTGTGGTCGTCCGGGC CGGCGTGAACCACCAGCGCG
Product: 3-oxoacyl-(acyl carrier protein) synthase II
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTRTPVAGTRIAGFGHYAPEQVVTSVEIERGLGLTEGWIVGRTGIRERRVAAPHEAVSDLAFAAAEKALADAGIPKAAIG LTLLATSTPDHLLPPTAPLLAHRLGLPASGAVDLTGACAGFLYALVLADGFVRTTGRAVLVAAANILSRRVDPSDPSTAA LFADAAGAVVLAPSPREGAGVVGSCLASDGSGYDLIQIPDSGSRLSATGQAGAGRMVMREGRTVFSRAVAMMASSCRTAL EEAGLTLDDVTHFLPHQANARIITAVAERLGISPERTLSSVADYGNSSAATVPFTLSALRATRAYGAGDVLLIAAAGAGL TGGAAVFRF
Sequences:
>Translated_329_residues MTRTPVAGTRIAGFGHYAPEQVVTSVEIERGLGLTEGWIVGRTGIRERRVAAPHEAVSDLAFAAAEKALADAGIPKAAIG LTLLATSTPDHLLPPTAPLLAHRLGLPASGAVDLTGACAGFLYALVLADGFVRTTGRAVLVAAANILSRRVDPSDPSTAA LFADAAGAVVLAPSPREGAGVVGSCLASDGSGYDLIQIPDSGSRLSATGQAGAGRMVMREGRTVFSRAVAMMASSCRTAL EEAGLTLDDVTHFLPHQANARIITAVAERLGISPERTLSSVADYGNSSAATVPFTLSALRATRAYGAGDVLLIAAAGAGL TGGAAVFRF >Mature_328_residues TRTPVAGTRIAGFGHYAPEQVVTSVEIERGLGLTEGWIVGRTGIRERRVAAPHEAVSDLAFAAAEKALADAGIPKAAIGL TLLATSTPDHLLPPTAPLLAHRLGLPASGAVDLTGACAGFLYALVLADGFVRTTGRAVLVAAANILSRRVDPSDPSTAAL FADAAGAVVLAPSPREGAGVVGSCLASDGSGYDLIQIPDSGSRLSATGQAGAGRMVMREGRTVFSRAVAMMASSCRTALE EAGLTLDDVTHFLPHQANARIITAVAERLGISPERTLSSVADYGNSSAATVPFTLSALRATRAYGAGDVLLIAAAGAGLT GGAAVFRF
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=323, Percent_Identity=39.0092879256966, Blast_Score=206, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 33352; Mature: 33221
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTPVAGTRIAGFGHYAPEQVVTSVEIERGLGLTEGWIVGRTGIRERRVAAPHEAVSDL CCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCHHHHHHH AFAAAEKALADAGIPKAAIGLTLLATSTPDHLLPPTAPLLAHRLGLPASGAVDLTGACAG HHHHHHHHHHHCCCCHHHHCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH FLYALVLADGFVRTTGRAVLVAAANILSRRVDPSDPSTAALFADAAGAVVLAPSPREGAG HHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHEEEECCCCEEEECCCCCCCCC VVGSCLASDGSGYDLIQIPDSGSRLSATGQAGAGRMVMREGRTVFSRAVAMMASSCRTAL HHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH EEAGLTLDDVTHFLPHQANARIITAVAERLGISPERTLSSVADYGNSSAATVPFTLSALR HHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHHHHHHH ATRAYGAGDVLLIAAAGAGLTGGAAVFRF HHHCCCCCCEEEEEECCCCCCCCCCEECC >Mature Secondary Structure TRTPVAGTRIAGFGHYAPEQVVTSVEIERGLGLTEGWIVGRTGIRERRVAAPHEAVSDL CCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCHHHHHHH AFAAAEKALADAGIPKAAIGLTLLATSTPDHLLPPTAPLLAHRLGLPASGAVDLTGACAG HHHHHHHHHHHCCCCHHHHCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH FLYALVLADGFVRTTGRAVLVAAANILSRRVDPSDPSTAALFADAAGAVVLAPSPREGAG HHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHEEEECCCCEEEECCCCCCCCC VVGSCLASDGSGYDLIQIPDSGSRLSATGQAGAGRMVMREGRTVFSRAVAMMASSCRTAL HHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH EEAGLTLDDVTHFLPHQANARIITAVAERLGISPERTLSSVADYGNSSAATVPFTLSALR HHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHHHHHHH ATRAYGAGDVLLIAAAGAGLTGGAAVFRF HHHCCCCCCEEEEEECCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA