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The map label for this gene is trbB [H]

Identifier: 154246816

GI number: 154246816

Start: 3203921

End: 3204904

Strand: Direct

Name: trbB [H]

Synonym: Xaut_2878

Alternate gene names: 154246816

Gene position: 3203921-3204904 (Clockwise)

Preceding gene: 154246815

Following gene: 154246817

Centisome position: 60.35

GC content: 69.21

Gene sequence:

>984_bases
ATGGCGGTTTCTCACCAGCAATCAGAGGCGATCCTTCGAGGCGCGCGCATGTTGCGCACGGCCCTCGGCCCCGCCATCGC
CGGATTCCTGGAAGACCCGTCGATCGTCGAGGTGATGCTCAATCCCGATGGGCGGCTCTGGATCGACCGGCTGTCCGAGG
GACTCTCCGATACCGGAGCGCGCCTGTCGCCCGCGGACGGCGAGCGCATCGTCCGCCTGGTCGCGCATCATGTCGGCGCC
GAGGTTCATTCCGGTTCACCGCGCGTTTCGGCCGAGTTGCCCGAGACGGGGGAGCGCTTCGAAGGCCTTCTGCCGCCCGT
CGTCGCCGCGCCGGCATTCGCGATCCGCAAACCTGCCGTCGCCGTCTTCACGCTCGCTGACTATGTCGCCGCCGAGATCA
TGTCCGCCGAACAGGCGGAGGTGCTCCGCCGCGCCGTCGCGGACCGCCGCAACATCCTCGTCGCCGGCGGCACCTCGACC
GGCAAGACCACGCTCACCAACGCCTTGCTCGCCGAGGTATCGAAGACCTTCGACCGCGTGGTTCTGATCGAGGACACGCG
CGAGCTGCAATGCGCCGCGCCCAACCTCGTAGCCATGCGCACCAAGGATGGCGTCGCATCGCTGTCCGATCTCGTCCGCT
CCTCGCTTCGCTTGCGCCCTGATCGCATTCCGATCGGAGAGGTGCGCGGCGCCGAGGCGCTGGATTTGCTCAAGGCCTGG
GGGACGGGCCACCCGGGCGGCATCGGCACGATCCACGCCGGCACCGCGCTCGGCGCGCTGCGCCGCCTTGAGCAACTCAT
TCAGGAAGCCGTCGTCACCGTCCCGCGCGCGCTGATCGCCGAGACCATCGATCTCGTCGCGGTGCTCAGCGGTCGCGGCT
CGACCCGTCGCCTCGCCGAACTCGCCCGCGTCGAAGGCCTACAGCCGGACGGCGACTACCGCGTCATCCCCGCAACCCAG
CCCGCCCCAGGAGAACCCGAATGA

Upstream 100 bases:

>100_bases
CGACCCCGTTCTGCTTGTTGTCATGCCCTGATTTCTGCCTCTTCTACTCATCCCCGATCCAGGGCCGCTTGTTTGCGGTC
CCGCGCAGAACGGGGACGAC

Downstream 100 bases:

>100_bases
TCCGCCATGCCCTGCGCGCTCGCCGTCATATCGCGACGGCCGCGTCCGTCGCCGTCTTCAGCATGATGCTTGCGCCAGCA
GCCCATGCTTCCGGCTCTTC

Product: P-type conjugative transfer ATPase TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MAVSHQQSEAILRGARMLRTALGPAIAGFLEDPSIVEVMLNPDGRLWIDRLSEGLSDTGARLSPADGERIVRLVAHHVGA
EVHSGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLADYVAAEIMSAEQAEVLRRAVADRRNILVAGGTST
GKTTLTNALLAEVSKTFDRVVLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGTALGALRRLEQLIQEAVVTVPRALIAETIDLVAVLSGRGSTRRLAELARVEGLQPDGDYRVIPATQ
PAPGEPE

Sequences:

>Translated_327_residues
MAVSHQQSEAILRGARMLRTALGPAIAGFLEDPSIVEVMLNPDGRLWIDRLSEGLSDTGARLSPADGERIVRLVAHHVGA
EVHSGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLADYVAAEIMSAEQAEVLRRAVADRRNILVAGGTST
GKTTLTNALLAEVSKTFDRVVLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGTALGALRRLEQLIQEAVVTVPRALIAETIDLVAVLSGRGSTRRLAELARVEGLQPDGDYRVIPATQ
PAPGEPE
>Mature_326_residues
AVSHQQSEAILRGARMLRTALGPAIAGFLEDPSIVEVMLNPDGRLWIDRLSEGLSDTGARLSPADGERIVRLVAHHVGAE
VHSGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLADYVAAEIMSAEQAEVLRRAVADRRNILVAGGTSTG
KTTLTNALLAEVSKTFDRVVLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAWG
TGHPGGIGTIHAGTALGALRRLEQLIQEAVVTVPRALIAETIDLVAVLSGRGSTRRLAELARVEGLQPDGDYRVIPATQP
APGEPE

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 34663; Mature: 34532

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSHQQSEAILRGARMLRTALGPAIAGFLEDPSIVEVMLNPDGRLWIDRLSEGLSDTGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCHHHCCC
RLSPADGERIVRLVAHHVGAEVHSGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHCCHHHHHCCHH
AVFTLADYVAAEIMSAEQAEVLRRAVADRRNILVAGGTSTGKTTLTNALLAEVSKTFDRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCEE
VLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
EEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGIGTIHAGTALGALRRLEQLIQEAVVTVPRALIAETIDLVAVLSGRGSTRRLAE
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LARVEGLQPDGDYRVIPATQPAPGEPE
HHHHCCCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
AVSHQQSEAILRGARMLRTALGPAIAGFLEDPSIVEVMLNPDGRLWIDRLSEGLSDTGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCHHHCCC
RLSPADGERIVRLVAHHVGAEVHSGSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHCCHHHHHCCHH
AVFTLADYVAAEIMSAEQAEVLRRAVADRRNILVAGGTSTGKTTLTNALLAEVSKTFDRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCEE
VLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
EEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
GTGHPGGIGTIHAGTALGALRRLEQLIQEAVVTVPRALIAETIDLVAVLSGRGSTRRLAE
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LARVEGLQPDGDYRVIPATQPAPGEPE
HHHHCCCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]