Click here to switch to the map view.

The map label for this gene is 154246815

Identifier: 154246815

GI number: 154246815

Start: 3203320

End: 3203751

Strand: Direct

Name: 154246815

Synonym: Xaut_2877

Alternate gene names: NA

Gene position: 3203320-3203751 (Clockwise)

Preceding gene: 154246814

Following gene: 154246816

Centisome position: 60.34

GC content: 65.05

Gene sequence:

>432_bases
ATGAAGATTCCGAAGAAGCAGCGCCTCTCGGTCTATCTCGATCCGGATATCACGAAAGCGCTCGCCGCTTATGCCGCGCG
TCGCGATCAATCGCGATCCCTGGTCGCGGAAGCGGCCATCGCATCCTTCCTATCGCCCGACGCCGCCGAGCGCCAAGAGG
CCGCGACCACCAAGCGATTGGACCAGCTCGACCGGCGCATGACGCGCATGGAACGCGACCTTGGCATTTCCGTGGAAATG
CTCGCAGTGTTCGTCCGCTTCTGGCTCACCACCAACCCGCCACTTCCGGAGCCAGCCCAGGCGGCCGCACGCGCACAGGC
CGGCGAGCGGTACGACGCCTTCGTCGCCGCACTCGGGCGGCGACTCGCGAAGGGACCGAAAGTGCGTGAGGAGATTTCGG
ACGACGTAGTAGGTGTCCCGGGCGCGGAATAA

Upstream 100 bases:

>100_bases
ACGCCGCGCGCGCAGGCCGGCTGAATCAGGTGATGCAGGGCGTCGCGCGGCAGGTCTCGCTCGATCCCAGTGACGGGATG
GACCTCTGAGCGTGGTGAAC

Downstream 100 bases:

>100_bases
TCATCGCGCCGGGCATCGCAAGAGTTTGTCAGTTCCGCCGTCGCCCTCTCTTTGTACGCCAGAGCACTACGACCCCGTTC
TGCTTGTTGTCATGCCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; CopG Family Protein; Ribbon-Helix-Helix Harboring Protein; Helix-Turn-Helix Protein CopG Family; Helix-Turn-Helix Protein Of CopG Family; CopG-Family Protein; Regulator Protein

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKIPKKQRLSVYLDPDITKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKRLDQLDRRMTRMERDLGISVEM
LAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALGRRLAKGPKVREEISDDVVGVPGAE

Sequences:

>Translated_143_residues
MKIPKKQRLSVYLDPDITKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKRLDQLDRRMTRMERDLGISVEM
LAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALGRRLAKGPKVREEISDDVVGVPGAE
>Mature_143_residues
MKIPKKQRLSVYLDPDITKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKRLDQLDRRMTRMERDLGISVEM
LAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALGRRLAKGPKVREEISDDVVGVPGAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15766; Mature: 15766

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPKKQRLSVYLDPDITKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKRL
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DQLDRRMTRMERDLGISVEMLAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALGR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
RLAKGPKVREEISDDVVGVPGAE
HHHCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKIPKKQRLSVYLDPDITKALAAYAARRDQSRSLVAEAAIASFLSPDAAERQEAATTKRL
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DQLDRRMTRMERDLGISVEMLAVFVRFWLTTNPPLPEPAQAAARAQAGERYDAFVAALGR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
RLAKGPKVREEISDDVVGVPGAE
HHHCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA