Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is ada [H]

Identifier: 154246752

GI number: 154246752

Start: 3133773

End: 3134702

Strand: Direct

Name: ada [H]

Synonym: Xaut_2813

Alternate gene names: 154246752

Gene position: 3133773-3134702 (Clockwise)

Preceding gene: 154246751

Following gene: 154246754

Centisome position: 59.03

GC content: 71.51

Gene sequence:

>930_bases
GTGCTGGCGCTCGATTGCCCCGCCCTCGACCTGTCCGCTTCCGGAGGCCGGATGACCGCGACGCCGGCCACCCCGCTCGC
CATCGCCGCCCGCGACTATGACGTGGTGCGGCGGGCAGTGGAGTATATTTCCCGCCATGTGCGCCAGCAGCCGGAGGTGG
AGGAGATCGCCGCCGCCGCCGGCGTCTCTGCCCGCGCGCTCACGGACCTGTTCCGCCGCTGGTGCGGGCTGACCCCCAAG
GCCTTCCTGCAGGCGGTGACCCTCGACCGCGCCCGCCGCATCGTCTCCGAATGCCCCAACGTGCTGGATGCGGCCTTCGA
GCTGGGCCTGTCCGGCCCCGGCCGGCTGCACGACCTGTTCGTGGTGCACGAGGCCATGTCGCCGGGGGAGTGGAAGACCG
GCGGGGCGGGGCTGGTGGTGCGCTTCGGCTTCCATCCCTCGCCGTTCGGGCTGGCGCTGGCCATGTCCACGCCGCGCGGC
CTGTGCGGTCTCGCCTTCGCCGACGTGGGGGAGGAGGCCGCGGCGCTGGCCGACATGCGCGCCCGCTGGCCCAACGCCAC
CTATGTGGAAGACCCCGCCGCCACCGCCCCTTTGGTAGCGCGCATTTTCGATCCCACGTCCTGGCAGGGCGACCAGCCAC
TGCGGATCGTGTTCATCGGCACGGATTTCGAGATCAAGGTTTGGGAGACGCTGCTGCGCATCCCCATGGGCCTTGCCACC
ACCTATTCCACCATCGCCGAGCACGTGGGCCGGCCGAAGGCGGCGCGCGCGGTGGGCGCGGCGGTGGGCAAGAACCCCAT
TTCCTTCGTGGTGCCGTGCCACCGCGTCATCGGCAAGAGCGGCGACCTCACCGGCTACCACTGGGGCCTGACCCGCAAGC
GCGCCATACTCGGCTGGGAAGCCGGCAAGGTGGAGCCTGCGGGGGAGTAG

Upstream 100 bases:

>100_bases
GATAGGTGGGCCGGGGTCCGGCCCGGGGCGGTGAAATCGGGTGGGCGCGGCTTGCCGGCTCTGGTCAGATGGGCCACGCT
CGACCTGAAGGAGATGCCCC

Downstream 100 bases:

>100_bases
GGCTCTCAGGCCTTGCGGCTGGTCTTGCGGGAAATCAGCGCGCGGGGGTCGATCTTCTGCATGGGGCCAGTGCGCCGGGC
ACCGATGCAACGCGATCCCG

Product: methylated-DNA--protein-cysteine methyltransferase

Products: NA

Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAAGVSARALTDLFRRWCGLTPK
AFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLFVVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRG
LCGLAFADVGEEAAALADMRARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT
TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWEAGKVEPAGE

Sequences:

>Translated_309_residues
MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAAGVSARALTDLFRRWCGLTPK
AFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLFVVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRG
LCGLAFADVGEEAAALADMRARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT
TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWEAGKVEPAGE
>Mature_309_residues
MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAAGVSARALTDLFRRWCGLTPK
AFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLFVVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRG
LCGLAFADVGEEAAALADMRARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT
TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWEAGKVEPAGE

Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]

COG id: COG0350

COG function: function code L; Methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788542, Length=255, Percent_Identity=29.0196078431373, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787596, Length=78, Percent_Identity=58.974358974359, Blast_Score=95, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI115533068, Length=84, Percent_Identity=42.8571428571429, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI115533070, Length=84, Percent_Identity=42.8571428571429, Blast_Score=88, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6320001, Length=88, Percent_Identity=45.4545454545455, Blast_Score=90, Evalue=4e-19,
Organism=Drosophila melanogaster, GI17137554, Length=172, Percent_Identity=30.2325581395349, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004026
- InterPro:   IPR016221
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR001497
- InterPro:   IPR014048
- InterPro:   IPR008332
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]

EC number: =2.1.1.63 [H]

Molecular weight: Translated: 33147; Mature: 33147

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAA
CCEECCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHC
GVSARALTDLFRRWCGLTPKAFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLF
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHE
VVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRGLCGLAFADVGEEAAALADMR
EEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHH
ARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT
HCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHH
TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWE
HHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEECCCCCCCEEEECC
AGKVEPAGE
CCCCCCCCC
>Mature Secondary Structure
MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAA
CCEECCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHC
GVSARALTDLFRRWCGLTPKAFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLF
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHE
VVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRGLCGLAFADVGEEAAALADMR
EEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHH
ARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT
HCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHH
TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWE
HHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEECCCCCCCEEEECC
AGKVEPAGE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]