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The map label for this gene is yejB [H]

Identifier: 154246575

GI number: 154246575

Start: 2924138

End: 2925253

Strand: Direct

Name: yejB [H]

Synonym: Xaut_2634

Alternate gene names: 154246575

Gene position: 2924138-2925253 (Clockwise)

Preceding gene: 154246574

Following gene: 154246576

Centisome position: 55.08

GC content: 63.26

Gene sequence:

>1116_bases
ATGCTCGCTTATATCATCCGCCGCATAGCCCTGATGGTGCCGACCATTCTCGGCATCATGCTGGTGTCGTTCGTGGTCAT
CCAGTTCGCCCCCGGCGGCCCGGTGGAGCGGGTGATCGCCCAGCTCACCGGCGACGACGTGTCCGCCACCTCCCGCGTTT
CCGGCGGCGGCGGCGACTTCTCGGGCGCCGGAGCCGCCGCCCAGGCCGGCGCGGCCATGGATGCAGCCGGCTCGAAATAT
CGCGGCGCACAGGGGCTGGACCCGGCCTTCGTCAAGCAGCTCGAAAAGCAGTTCGGCTTCGACAAGCCGGCTCACGAGCG
CTTCTGGAAGATGATTACGGATTACGCCACTTTCGATTTCGGCCGCTCCTATTTCCGCGACATCACGGTGCTGCAGCTGA
TCGGGGAGAAGATGCCCGTCTCCATTTCCCTTGGCCTTTGGATGACGTTGCTCACCTATCTCATCTCCATTCCGCTCGGC
ATCTCCAAGGCCATGCGCGACGGCTCCCGCTTCGACATGTGGACCTCGGCGGTGATCATCGTCGGCTATGCGATCCCGTC
GTTCCTGTTCGCCATCCTGCTGATCATCCTGTTCGCCGGCGGCTCGTTCCTCGACCTGTTCCCGCTGCGCGGGCTGACAT
CGGAGAACTTCTGGCAGATGAGCTGGCCGGAGCGGATCGTCGACTATGCCTGGCACCTGGTGCTGCCGCTGACCTCTATG
GTGCTCGGCGCCTTCGCCACCATGACCCTGCTCACCAAGAATTCGTTCCTGGAGGAGATCCGCAAGCAATATGTCACCAC
CGCGCGGATGAAGGGGTTGAGCGAGCGGCGGGTGCTCTACGGCCATGTGTTCAGGAACGCCATGCTGATCGTGATCGCCG
GCTTTCCCAGCGCCTTCATCGCCGCCTTCTTCTCCGGCTCGCTGCTGATCGAGACCATCTTCTCCCTGGACGGCCTCGGC
CTGCTGGGGTTCGAGAGCGTGCTCAACCGCGACTATCCGGTGGTGTTCGCCACCCTCTACATCTTCTCGCTGGCGGGGCT
CATCGTCGGCCTGATCTCGGACCTCACCTACATGCTGGTCGATCCGCGTATCGACTTCGAGACGCGGGAGGTCTGA

Upstream 100 bases:

>100_bases
GGCACGGAGCCGGCCAGAGGCGGGTGAAGCCCGCGCTTGAGGATCGACGGTTGACGGTGCGCCGGCTTGGCTGCACCGTC
CGGCCGGATCGGGAGACGTG

Downstream 100 bases:

>100_bases
GAATGGACGCAGTCCCCGTGCTCCAGCCGGGCGAGCCCACCGACGTGCCCGCCGCTCGCGACGCGCCGCACGGCCAGCTC
CAGCCGCCGGGCGCGGCCAA

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MLAYIIRRIALMVPTILGIMLVSFVVIQFAPGGPVERVIAQLTGDDVSATSRVSGGGGDFSGAGAAAQAGAAMDAAGSKY
RGAQGLDPAFVKQLEKQFGFDKPAHERFWKMITDYATFDFGRSYFRDITVLQLIGEKMPVSISLGLWMTLLTYLISIPLG
ISKAMRDGSRFDMWTSAVIIVGYAIPSFLFAILLIILFAGGSFLDLFPLRGLTSENFWQMSWPERIVDYAWHLVLPLTSM
VLGAFATMTLLTKNSFLEEIRKQYVTTARMKGLSERRVLYGHVFRNAMLIVIAGFPSAFIAAFFSGSLLIETIFSLDGLG
LLGFESVLNRDYPVVFATLYIFSLAGLIVGLISDLTYMLVDPRIDFETREV

Sequences:

>Translated_371_residues
MLAYIIRRIALMVPTILGIMLVSFVVIQFAPGGPVERVIAQLTGDDVSATSRVSGGGGDFSGAGAAAQAGAAMDAAGSKY
RGAQGLDPAFVKQLEKQFGFDKPAHERFWKMITDYATFDFGRSYFRDITVLQLIGEKMPVSISLGLWMTLLTYLISIPLG
ISKAMRDGSRFDMWTSAVIIVGYAIPSFLFAILLIILFAGGSFLDLFPLRGLTSENFWQMSWPERIVDYAWHLVLPLTSM
VLGAFATMTLLTKNSFLEEIRKQYVTTARMKGLSERRVLYGHVFRNAMLIVIAGFPSAFIAAFFSGSLLIETIFSLDGLG
LLGFESVLNRDYPVVFATLYIFSLAGLIVGLISDLTYMLVDPRIDFETREV
>Mature_371_residues
MLAYIIRRIALMVPTILGIMLVSFVVIQFAPGGPVERVIAQLTGDDVSATSRVSGGGGDFSGAGAAAQAGAAMDAAGSKY
RGAQGLDPAFVKQLEKQFGFDKPAHERFWKMITDYATFDFGRSYFRDITVLQLIGEKMPVSISLGLWMTLLTYLISIPLG
ISKAMRDGSRFDMWTSAVIIVGYAIPSFLFAILLIILFAGGSFLDLFPLRGLTSENFWQMSWPERIVDYAWHLVLPLTSM
VLGAFATMTLLTKNSFLEEIRKQYVTTARMKGLSERRVLYGHVFRNAMLIVIAGFPSAFIAAFFSGSLLIETIFSLDGLG
LLGFESVLNRDYPVVFATLYIFSLAGLIVGLISDLTYMLVDPRIDFETREV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=369, Percent_Identity=56.9105691056911, Blast_Score=444, Evalue=1e-126,
Organism=Escherichia coli, GI1789965, Length=385, Percent_Identity=28.3116883116883, Blast_Score=141, Evalue=8e-35,
Organism=Escherichia coli, GI1787497, Length=293, Percent_Identity=27.9863481228669, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1787053, Length=374, Percent_Identity=27.5401069518717, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1789888, Length=364, Percent_Identity=24.1758241758242, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787761, Length=294, Percent_Identity=26.8707482993197, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787550, Length=259, Percent_Identity=24.3243243243243, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40887; Mature: 40887

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAYIIRRIALMVPTILGIMLVSFVVIQFAPGGPVERVIAQLTGDDVSATSRVSGGGGDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCC
SGAGAAAQAGAAMDAAGSKYRGAQGLDPAFVKQLEKQFGFDKPAHERFWKMITDYATFDF
CCCCHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GRSYFRDITVLQLIGEKMPVSISLGLWMTLLTYLISIPLGISKAMRDGSRFDMWTSAVII
HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHH
VGYAIPSFLFAILLIILFAGGSFLDLFPLRGLTSENFWQMSWPERIVDYAWHLVLPLTSM
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VLGAFATMTLLTKNSFLEEIRKQYVTTARMKGLSERRVLYGHVFRNAMLIVIAGFPSAFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCHHHHH
AAFFSGSLLIETIFSLDGLGLLGFESVLNRDYPVVFATLYIFSLAGLIVGLISDLTYMLV
HHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPRIDFETREV
CCCCCCCCCCC
>Mature Secondary Structure
MLAYIIRRIALMVPTILGIMLVSFVVIQFAPGGPVERVIAQLTGDDVSATSRVSGGGGDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCC
SGAGAAAQAGAAMDAAGSKYRGAQGLDPAFVKQLEKQFGFDKPAHERFWKMITDYATFDF
CCCCHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GRSYFRDITVLQLIGEKMPVSISLGLWMTLLTYLISIPLGISKAMRDGSRFDMWTSAVII
HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHH
VGYAIPSFLFAILLIILFAGGSFLDLFPLRGLTSENFWQMSWPERIVDYAWHLVLPLTSM
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VLGAFATMTLLTKNSFLEEIRKQYVTTARMKGLSERRVLYGHVFRNAMLIVIAGFPSAFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCHHHHH
AAFFSGSLLIETIFSLDGLGLLGFESVLNRDYPVVFATLYIFSLAGLIVGLISDLTYMLV
HHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPRIDFETREV
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]