| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is cpx [H]
Identifier: 154246569
GI number: 154246569
Start: 2915730
End: 2917526
Strand: Direct
Name: cpx [H]
Synonym: Xaut_2628
Alternate gene names: 154246569
Gene position: 2915730-2917526 (Clockwise)
Preceding gene: 154246568
Following gene: 154246572
Centisome position: 54.92
GC content: 69.78
Gene sequence:
>1797_bases ATGCTTGACGCCAAAGCGCGGTCACGGTCGCCGCGGTCCCATATCCGACGCGTGATCGAGCGCCTCTTTCCTGATCCGAG ACGCGGCAGCCGCACCCTGCGTCGCCCGGCCTCCCTGGTCTACGGGCTCGACGACAAGGTGCCCCCGGTCGCGCTGGTGC CGCTTGCCGCCCAGCACGCCATGCTGGCGGTCACCTTCCTGATCTATCCGGTGCTGGCGGCCACCGAGGCGCGGCTGCCG GCGGACCAGATGTCCGCTATGCTCTCGGCCTGCGCTATGAGCATCGGCGTCGCCACCATCATCCAGTGCCTGCGCACGCG CTTCGGCTCGGGCTATCTCGCCGTGCACATCCCGGCGCCGGGGGCCATTCCGCTCGCCGCCCAGGCGCTGATGCTCGGCG GGCTCGGGCTGATGGCCATGACCACGCTGCTGGTGGGGATCTGCCAATTGTTCATGGCGCGCCTGGTGCGGCCGCTGCGG GTGCTACTGCCGCCGGAAGTGTGCGGCGTGGCGGTGAGCATGCTCGGTGTGTCGCTGGCGGGGCCAGCCCTGCGCCGTGC GCTGGGGCTCGACCACGGGCCGCTGGTGGTGCAGAACGCCACCTTCTCCAGCCTCGCCACCGTGGGCATCATCGTCGCCA TCACCGTGTTCGCCCCCCGTCGGCTGAAGCTGTTCGCGGTGTTTGCCGGCGCTGGCATCGGCTGGGTGCTGGCGCTGCTG CTCGGCGCGGGGCATCCGGAGGCGAACGCGGCCATCGCCGCCGCGCCCCTGGTCGCCTGGCCGACGCTGACGCTGCCCAG CCTCCAGTTCGCCCCGGCGCTGTTTCCGTTGATGGCGCTGCTGGTTATGATGAATCTCGTGGACGTTCTCTCGGTCACCG TCTCGCTGGAGAAGATGAACGATGCCGACTGGCGCCGCGCCGACATGCAGGCGGCCCAGAGGGCGGTGACTGCCTGCGGC ATCGGCAACATCCTCAACGGGCTGACCTCCGGCTTCCAGTCGGGGCTGTCCTCCTCGTCGGTGGGGCTGGCCTTCGCCAC CCAGTCCACGGCGCGCATCATCGGCATCCTCGCCGGTGCGATGATCTTCGCCATCGCCTTCCTGCCGAAGGCCATCGTGG CGCTCACCCTCATCCCCTCGCCAGTGATCGGCGGCATCCTGCTCTACACCTCGGCCTATCTGGTGGTGGCGGGCATGGAT CTCGTCACCTCGCGCCGCCTCAGCGAGCGGCGGGTGTTCGTGGTGGGGCTGTCGGTGCTGGCGGGGCTGTCGGTAGCCCT CCTGCCGTTGCGAGACCAACTGCCGCTGGCGCTCCAGCCCCTGTTCTCCACGCCGCTCACGGTGGGGGCGCTCAGCGCCA TCCTGCTGAATCTGCTGTTCCGCATCGGCATCGCTCGCGAGACCGGGGAGATCGTACCGGACGGGGCGCATGCCTTCCCA TTCGCCCGCGACTTCCTGGAGCGGCAGGGCGATGTGTGGGGCGCGCGACGCGACGTGATCGCCGCCGCCATCCCCACGGT GGCGCAGGCGCTGGAACTCGTCATCGACGCCGGCATCGCCGAGGGCCCCATCGAGCTGCGCGCGCGCTTCGACGAGACGC ATCTCGACGTCTATCTCATCTATGACGGCGAGGTGGTAGAGGCGCCCAAGGAGCGGCCCTCGCCCGAGGCGCTGCTGGGC GACGCGAAGGAACACGCCTCGTTCGCCGCCTGGATGCTCAAGCGCCTGTCCGACCACGTGCATTTCGGCCGCACCGGCGG CGGCAAGGCGCGCATCGCCCTGAGCTTTGATCACTGA
Upstream 100 bases:
>100_bases GCCGCCCTGATGCTTGCGCGCACTCATCCCGATGGCCTGTTCGTGCCGCCGCCCATCGCCATCGCCCATCACCTCGTCCG GGCCTTCGTCGAAGGTATCG
Downstream 100 bases:
>100_bases ACGGAGCGGCGCTCCGCCCGTTCAGAACGTCCGGATCAGACCGTCTCCTCAGAACGTTTCCTGCTCCGCCGCGAACTGCG CCCGGTAGGGATGGGCGGGA
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MLDAKARSRSPRSHIRRVIERLFPDPRRGSRTLRRPASLVYGLDDKVPPVALVPLAAQHAMLAVTFLIYPVLAATEARLP ADQMSAMLSACAMSIGVATIIQCLRTRFGSGYLAVHIPAPGAIPLAAQALMLGGLGLMAMTTLLVGICQLFMARLVRPLR VLLPPEVCGVAVSMLGVSLAGPALRRALGLDHGPLVVQNATFSSLATVGIIVAITVFAPRRLKLFAVFAGAGIGWVLALL LGAGHPEANAAIAAAPLVAWPTLTLPSLQFAPALFPLMALLVMMNLVDVLSVTVSLEKMNDADWRRADMQAAQRAVTACG IGNILNGLTSGFQSGLSSSSVGLAFATQSTARIIGILAGAMIFAIAFLPKAIVALTLIPSPVIGGILLYTSAYLVVAGMD LVTSRRLSERRVFVVGLSVLAGLSVALLPLRDQLPLALQPLFSTPLTVGALSAILLNLLFRIGIARETGEIVPDGAHAFP FARDFLERQGDVWGARRDVIAAAIPTVAQALELVIDAGIAEGPIELRARFDETHLDVYLIYDGEVVEAPKERPSPEALLG DAKEHASFAAWMLKRLSDHVHFGRTGGGKARIALSFDH
Sequences:
>Translated_598_residues MLDAKARSRSPRSHIRRVIERLFPDPRRGSRTLRRPASLVYGLDDKVPPVALVPLAAQHAMLAVTFLIYPVLAATEARLP ADQMSAMLSACAMSIGVATIIQCLRTRFGSGYLAVHIPAPGAIPLAAQALMLGGLGLMAMTTLLVGICQLFMARLVRPLR VLLPPEVCGVAVSMLGVSLAGPALRRALGLDHGPLVVQNATFSSLATVGIIVAITVFAPRRLKLFAVFAGAGIGWVLALL LGAGHPEANAAIAAAPLVAWPTLTLPSLQFAPALFPLMALLVMMNLVDVLSVTVSLEKMNDADWRRADMQAAQRAVTACG IGNILNGLTSGFQSGLSSSSVGLAFATQSTARIIGILAGAMIFAIAFLPKAIVALTLIPSPVIGGILLYTSAYLVVAGMD LVTSRRLSERRVFVVGLSVLAGLSVALLPLRDQLPLALQPLFSTPLTVGALSAILLNLLFRIGIARETGEIVPDGAHAFP FARDFLERQGDVWGARRDVIAAAIPTVAQALELVIDAGIAEGPIELRARFDETHLDVYLIYDGEVVEAPKERPSPEALLG DAKEHASFAAWMLKRLSDHVHFGRTGGGKARIALSFDH >Mature_598_residues MLDAKARSRSPRSHIRRVIERLFPDPRRGSRTLRRPASLVYGLDDKVPPVALVPLAAQHAMLAVTFLIYPVLAATEARLP ADQMSAMLSACAMSIGVATIIQCLRTRFGSGYLAVHIPAPGAIPLAAQALMLGGLGLMAMTTLLVGICQLFMARLVRPLR VLLPPEVCGVAVSMLGVSLAGPALRRALGLDHGPLVVQNATFSSLATVGIIVAITVFAPRRLKLFAVFAGAGIGWVLALL LGAGHPEANAAIAAAPLVAWPTLTLPSLQFAPALFPLMALLVMMNLVDVLSVTVSLEKMNDADWRRADMQAAQRAVTACG IGNILNGLTSGFQSGLSSSSVGLAFATQSTARIIGILAGAMIFAIAFLPKAIVALTLIPSPVIGGILLYTSAYLVVAGMD LVTSRRLSERRVFVVGLSVLAGLSVALLPLRDQLPLALQPLFSTPLTVGALSAILLNLLFRIGIARETGEIVPDGAHAFP FARDFLERQGDVWGARRDVIAAAIPTVAQALELVIDAGIAEGPIELRARFDETHLDVYLIYDGEVVEAPKERPSPEALLG DAKEHASFAAWMLKRLSDHVHFGRTGGGKARIALSFDH
Specific function: Unknown
COG id: COG2233
COG function: function code F; Xanthine/uracil permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082181, Length=444, Percent_Identity=23.8738738738739, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1790087, Length=452, Percent_Identity=25.2212389380531, Blast_Score=84, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017588 - InterPro: IPR006042 - InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 63232; Mature: 63232
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAKARSRSPRSHIRRVIERLFPDPRRGSRTLRRPASLVYGLDDKVPPVALVPLAAQHA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCHHHHHCCCCCCCCCEEEHHHHHHHH MLAVTFLIYPVLAATEARLPADQMSAMLSACAMSIGVATIIQCLRTRFGSGYLAVHIPAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC GAIPLAAQALMLGGLGLMAMTTLLVGICQLFMARLVRPLRVLLPPEVCGVAVSMLGVSLA CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC GPALRRALGLDHGPLVVQNATFSSLATVGIIVAITVFAPRRLKLFAVFAGAGIGWVLALL CHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH LGAGHPEANAAIAAAPLVAWPTLTLPSLQFAPALFPLMALLVMMNLVDVLSVTVSLEKMN HCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DADWRRADMQAAQRAVTACGIGNILNGLTSGFQSGLSSSSVGLAFATQSTARIIGILAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHH MIFAIAFLPKAIVALTLIPSPVIGGILLYTSAYLVVAGMDLVTSRRLSERRVFVVGLSVL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHH AGLSVALLPLRDQLPLALQPLFSTPLTVGALSAILLNLLFRIGIARETGEIVPDGAHAFP HCCHHEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH FARDFLERQGDVWGARRDVIAAAIPTVAQALELVIDAGIAEGPIELRARFDETHLDVYLI HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCEEEEEE YDGEVVEAPKERPSPEALLGDAKEHASFAAWMLKRLSDHVHFGRTGGGKARIALSFDH ECCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MLDAKARSRSPRSHIRRVIERLFPDPRRGSRTLRRPASLVYGLDDKVPPVALVPLAAQHA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCHHHHHCCCCCCCCCEEEHHHHHHHH MLAVTFLIYPVLAATEARLPADQMSAMLSACAMSIGVATIIQCLRTRFGSGYLAVHIPAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC GAIPLAAQALMLGGLGLMAMTTLLVGICQLFMARLVRPLRVLLPPEVCGVAVSMLGVSLA CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC GPALRRALGLDHGPLVVQNATFSSLATVGIIVAITVFAPRRLKLFAVFAGAGIGWVLALL CHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH LGAGHPEANAAIAAAPLVAWPTLTLPSLQFAPALFPLMALLVMMNLVDVLSVTVSLEKMN HCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DADWRRADMQAAQRAVTACGIGNILNGLTSGFQSGLSSSSVGLAFATQSTARIIGILAGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHH MIFAIAFLPKAIVALTLIPSPVIGGILLYTSAYLVVAGMDLVTSRRLSERRVFVVGLSVL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHH AGLSVALLPLRDQLPLALQPLFSTPLTVGALSAILLNLLFRIGIARETGEIVPDGAHAFP HCCHHEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH FARDFLERQGDVWGARRDVIAAAIPTVAQALELVIDAGIAEGPIELRARFDETHLDVYLI HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCEEEEEE YDGEVVEAPKERPSPEALLGDAKEHASFAAWMLKRLSDHVHFGRTGGGKARIALSFDH ECCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11792842; 8162194 [H]