| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yddG [H]
Identifier: 154246528
GI number: 154246528
Start: 2877077
End: 2877931
Strand: Direct
Name: yddG [H]
Synonym: Xaut_2587
Alternate gene names: 154246528
Gene position: 2877077-2877931 (Clockwise)
Preceding gene: 154246527
Following gene: 154246529
Centisome position: 54.19
GC content: 70.53
Gene sequence:
>855_bases ATGACCTCCGCTGCCGCCACCCGCATCGGCCTGCTCGCCATCCTGTTGTGGGCGACCCTTGCCGTTCTCACGGCGGCGAC GGGGCAGGTGCCTCCGTTTCTCCTCACAGCGCTGACCTTCGCCATCGGCGGAGCGGTGGGCGTGGGGGCGGCGCTGGCCG GGCCGGGGCTGGGCGTGCTGAAGCAGCGGCCGCTGGCCTACCTGCATGGGGTGGGTGGGCTGTTCGGCTACCACTTCCTC TATTTCACCGCGCTGAAATGGGCACCGGCGGCGGAAGCCGGGCTGATCGCCTATCTGTGGCCCCTGCTCATCGTGCTGCT GTCTGCCTTCCTGCCCGGCGGCGGGCTGCGCCGTGTCCATGTGATCGGCGCGCTCATGGGCTTTGCTGGAACCGTGGTGC TGCTGTTGGGGAAGGGCGGCTTCACCGGCGTGGAGGCGCGCTTCGCTCCGGGCTATCTCGCCGCCTTCGCCTGCGCCTTC ATCTGGTCGTCCTATTCGGTGGCCTCGCGCCATTTCGCGGATGTGCCCACCCAGGCGGTGGCGGGCTTCTGCCTCGCCAC GGCGGTGCTGGCCGGCCTGTGCCACCTGGCGCTGGAACGCACCGTGTGGCCCTCCGGCGCGCTGGAATGGGCGGCGGTGG CGCTGCTGGGCATTGGCCCGGTGGGGCTGGCCTTCTACACCTGGGACATCGGCATGAAACGAGGCGACGTGCGCCTTCTG GGCGTCGCCTCCTATGCCGCGCCGGTCCTGTCCACGCTGCTGCTTGTGGCGACAGGCTTTGCCGCGCCGTCCTGGTCGCT GGCACTGGCCTGCGCCCTCATCGTCGGGGGAGCCTTCGTCGCCACCCGGCGTTGA
Upstream 100 bases:
>100_bases TGGCTGCGCCCGGCGCGCCTGCGCGACATCCCCATGCCGCCCGCCGACGAGCCGCTGATCCCCGCCCTCATCGATCTGCT GGGCCCCTGAGCGGCGCGTC
Downstream 100 bases:
>100_bases GATGGCGTCCCCCTGAAGGAGAAAAGCCATGGCTGATCCCGTGCCTGCCCATCCCGCCCTTGCTTCCGGTGCCGTGGCGG TCGTGACCGGCGGCGCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTSAAATRIGLLAILLWATLAVLTAATGQVPPFLLTALTFAIGGAVGVGAALAGPGLGVLKQRPLAYLHGVGGLFGYHFL YFTALKWAPAAEAGLIAYLWPLLIVLLSAFLPGGGLRRVHVIGALMGFAGTVVLLLGKGGFTGVEARFAPGYLAAFACAF IWSSYSVASRHFADVPTQAVAGFCLATAVLAGLCHLALERTVWPSGALEWAAVALLGIGPVGLAFYTWDIGMKRGDVRLL GVASYAAPVLSTLLLVATGFAAPSWSLALACALIVGGAFVATRR
Sequences:
>Translated_284_residues MTSAAATRIGLLAILLWATLAVLTAATGQVPPFLLTALTFAIGGAVGVGAALAGPGLGVLKQRPLAYLHGVGGLFGYHFL YFTALKWAPAAEAGLIAYLWPLLIVLLSAFLPGGGLRRVHVIGALMGFAGTVVLLLGKGGFTGVEARFAPGYLAAFACAF IWSSYSVASRHFADVPTQAVAGFCLATAVLAGLCHLALERTVWPSGALEWAAVALLGIGPVGLAFYTWDIGMKRGDVRLL GVASYAAPVLSTLLLVATGFAAPSWSLALACALIVGGAFVATRR >Mature_283_residues TSAAATRIGLLAILLWATLAVLTAATGQVPPFLLTALTFAIGGAVGVGAALAGPGLGVLKQRPLAYLHGVGGLFGYHFLY FTALKWAPAAEAGLIAYLWPLLIVLLSAFLPGGGLRRVHVIGALMGFAGTVVLLLGKGGFTGVEARFAPGYLAAFACAFI WSSYSVASRHFADVPTQAVAGFCLATAVLAGLCHLALERTVWPSGALEWAAVALLGIGPVGLAFYTWDIGMKRGDVRLLG VASYAAPVLSTLLLVATGFAAPSWSLALACALIVGGAFVATRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
Organism=Escherichia coli, GI145693132, Length=302, Percent_Identity=27.1523178807947, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 29067; Mature: 28936
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAAATRIGLLAILLWATLAVLTAATGQVPPFLLTALTFAIGGAVGVGAALAGPGLGVL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH KQRPLAYLHGVGGLFGYHFLYFTALKWAPAAEAGLIAYLWPLLIVLLSAFLPGGGLRRVH HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VIGALMGFAGTVVLLLGKGGFTGVEARFAPGYLAAFACAFIWSSYSVASRHFADVPTQAV HHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AGFCLATAVLAGLCHLALERTVWPSGALEWAAVALLGIGPVGLAFYTWDIGMKRGDVRLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHEEEECCCCCCCEEEE GVASYAAPVLSTLLLVATGFAAPSWSLALACALIVGGAFVATRR EHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure TSAAATRIGLLAILLWATLAVLTAATGQVPPFLLTALTFAIGGAVGVGAALAGPGLGVL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH KQRPLAYLHGVGGLFGYHFLYFTALKWAPAAEAGLIAYLWPLLIVLLSAFLPGGGLRRVH HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VIGALMGFAGTVVLLLGKGGFTGVEARFAPGYLAAFACAFIWSSYSVASRHFADVPTQAV HHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AGFCLATAVLAGLCHLALERTVWPSGALEWAAVALLGIGPVGLAFYTWDIGMKRGDVRLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHEEEECCCCCCCEEEE GVASYAAPVLSTLLLVATGFAAPSWSLALACALIVGGAFVATRR EHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1834669; 7567469 [H]