| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is nudG [H]
Identifier: 154246527
GI number: 154246527
Start: 2876650
End: 2877066
Strand: Direct
Name: nudG [H]
Synonym: Xaut_2586
Alternate gene names: 154246527
Gene position: 2876650-2877066 (Clockwise)
Preceding gene: 154246526
Following gene: 154246528
Centisome position: 54.19
GC content: 71.22
Gene sequence:
>417_bases GTGACCCTCCCCCTCAAGATCACCCTCGTCGCCGCCTGCGCCCTCGTGGACGCAGACGGCCGCGTGCTTGTGGCCCAGCG GCCGGAGGGCAAGGCTCTCGCGGGCCTGTGGGAATTCCCCGGCGGCAAGGTGGAGCCGGGGGAGCGGCCCGAGGCGACGC TGATCCGCGAGCTGGACGAGGAACTGGGCATCGCGGTGAAGGAGGCGTGCCTGGCCCCGCTCACCTTCGCGAGCCACGCC TACGAGACCTTCCATCTGCTGATGCCCCTGTGGATCTGCCGCCGTTGGGAAGGCAGCATCCAGCGCAAGGAGCATCAGGC GCTGCAATGGCTGCGCCCGGCGCGCCTGCGCGACATCCCCATGCCGCCCGCCGACGAGCCGCTGATCCCCGCCCTCATCG ATCTGCTGGGCCCCTGA
Upstream 100 bases:
>100_bases ATCTGCCCATGCAGCCCCGGCTGAACGTACCCCTTGAGGCCGGCACCATTGACCTCCACGCCGAGGTGGACGTCACCTGG AGCGCCACTGGGAGCGCAAA
Downstream 100 bases:
>100_bases GCGGCGCGTCATGACCTCCGCTGCCGCCACCCGCATCGGCCTGCTCGCCATCCTGTTGTGGGCGACCCTTGCCGTTCTCA CGGCGGCGACGGGGCAGGTG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTLPLKITLVAACALVDADGRVLVAQRPEGKALAGLWEFPGGKVEPGERPEATLIRELDEELGIAVKEACLAPLTFASHA YETFHLLMPLWICRRWEGSIQRKEHQALQWLRPARLRDIPMPPADEPLIPALIDLLGP
Sequences:
>Translated_138_residues MTLPLKITLVAACALVDADGRVLVAQRPEGKALAGLWEFPGGKVEPGERPEATLIRELDEELGIAVKEACLAPLTFASHA YETFHLLMPLWICRRWEGSIQRKEHQALQWLRPARLRDIPMPPADEPLIPALIDLLGP >Mature_137_residues TLPLKITLVAACALVDADGRVLVAQRPEGKALAGLWEFPGGKVEPGERPEATLIRELDEELGIAVKEACLAPLTFASHAY ETFHLLMPLWICRRWEGSIQRKEHQALQWLRPARLRDIPMPPADEPLIPALIDLLGP
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=133, Percent_Identity=43.609022556391, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1786288, Length=130, Percent_Identity=33.8461538461538, Blast_Score=76, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 15317; Mature: 15186
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPLKITLVAACALVDADGRVLVAQRPEGKALAGLWEFPGGKVEPGERPEATLIRELDE CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHHH ELGIAVKEACLAPLTFASHAYETFHLLMPLWICRRWEGSIQRKEHQALQWLRPARLRDIP HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCC MPPADEPLIPALIDLLGP CCCCCCCHHHHHHHHHCC >Mature Secondary Structure TLPLKITLVAACALVDADGRVLVAQRPEGKALAGLWEFPGGKVEPGERPEATLIRELDE CCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEHHCCCCCCCCCCCCCCHHHHHHHHHH ELGIAVKEACLAPLTFASHAYETFHLLMPLWICRRWEGSIQRKEHQALQWLRPARLRDIP HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCC MPPADEPLIPALIDLLGP CCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]