| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is pheT [H]
Identifier: 154245874
GI number: 154245874
Start: 2184221
End: 2186635
Strand: Reverse
Name: pheT [H]
Synonym: Xaut_1930
Alternate gene names: 154245874
Gene position: 2186635-2184221 (Counterclockwise)
Preceding gene: 154245875
Following gene: 154245873
Centisome position: 41.19
GC content: 70.43
Gene sequence:
>2415_bases ATGAAATTCACCTTCTCCTGGCTCCAGGACCACCTTGAGCCCACCGCCTCCTTCGATGCCATCGTCGAGCGCCTGTCCCT CATCGGCCTGGAGGTCGAGGGGGTGGAGGACAAGGCCAGGCAGCTCGCGCCCTTCGTGGTGGGCGAGGTGCTCACGGCCG AGAAGCATCCCAATGCCGATAAGCTGAAGGTCTGCACCGTCTCCATCGGGAAAGGCGAGCCCATCCAGGTGGTGTGCGGC GCGCCCAATGCGCGGGCGGGGCTGAAGACCGTGTTCGCGGCGCCGGGCACGGTCATTCCCACCTCCGGGCTGGAGCTGAA GATCGGCAAGATCCGCGACGTGGAAAGCCGCGGCATGCTGTGCTCGGCCCGCGAGCTGGGCCTGTCGGAAGAGCATGACG GCATCCTGGAGCTGCCGGAGGACGCCACCCCCGGCGCCCCGTTCGCCGAAGTGCTGGGCCTCAACGATCCGGTGGTGGAA ATCGCCGTGACCCCCAATCGCGCCGACTGCCTCGGCGTCGCCGGCGTGGCGCGGGATCTGGCCGCCGCCGGCCTCGGCGA GCTGATGGCGCCGAAGGTGAAGCCGGTGGACGGCACCTTCCCCGCGCCGCTGGGCGTCACGCTGGAATTCGGCGAGACCG GCTCGCTCTGCCCGGCCTTCGCCCTTCGGGTGGTGAAGGGGGTGAAGAACGGCCCCTCGCCGCAATGGATGCAGGACCGC TTGCGCGCCATCGGGCTTCGCCCCATCAACGCGCTGGTGGACGTCACCAATTTCATGACGTTCGACCGCAACCGGCCGCT CCACGTCTTCGACCTCGCCAAGGTGAAGGGCAATCTGGTGGTGCGCCGGGGCCGGCCCGGGGAGACCCTGCTGGCGCTGG ACGGCAAGACCTACGCGCTGGACGAGACCATGTGCGTCATCGCCGACGAGAACGGCGTGGAGAGCCTCGCCGGCATCATG GGCGGGGAAGCCTCCGGCTGCGACGAGGGCACCACCGACGTGGTGATCGAATCCGCCCTGTGGGATGCCATCAATATCGC CCAGACCGGGCGCAAGCTCGGTATCAATTCCGATGCCCGCTTCCGCTTCGAGCGCGGCGTGGACCCGGCCTTCACCCTGC CGGGGCTGGAGCTCGCCACCCATCTCATTCAGGAGATCTGCGGCGGCGAGGCGTCCGAGGTGGTGCTGGCCGGCGCCATA CCGGACACAGCGCGCACGATTCGCTTCCCCCTGTCCGAGGTGAAGCGCCTTGCCGGGCTGGAAGCCTCCGAACAGGAGAT CCGCGACGTGCTGGAGGCGCTCGGCTTCGCCGTCTCCGGCGCGGCGCCGGTGCTGGACGTGGTGCCGCCCTCCTGGCGCG GTGACATCGAGGGCAAGGCGGACCTGGTGGAAGAGGTGGTACGCATCCTCGGCCTCGATCGCGTGCCCGCCACCGAGCTG CCGCGCGGGGAGGATGCCCGCAAGGCGGTGCTGACCCCGCTCCAGCTGAGGAGCCGCAAGGCCCGCCGGGCACTGGCGGC GCGCGGCATGGTAGAGGCGGTCACCTGGTCCTTCGTCAGCCAGGAGGCCGCCAGGATGTTCGGCGGCGGCGCGCCGGCGC TGGCCCTGTCCAACCCCATCGCCGCCGAGCTTTCGGACATGCGGCCGAGCCTGTTGCCCGGCCTCATCAAGGCGGCCGGC ACCAATGCGGCGCGCGGCTTTGCCGACGCGGCGCTGTTCGAGGTCGGCCAGATCTTCCTCGACGACACCCCCACCGGCCA GCGCCAGGCCGCTACCGGCCTGCGGCGCGGCACGGCGAAGCCCTCAGGCGCCGGCCGCCACTGGTCCGGCACCGCCGGGG CGGTGGACGTGTTCGACGCCAAGGCCGATGCCACTGCGGCGCTCGCCGCCTGCGGGGCGCCGGTGGCGAACCTTCAGGTC ACCACCGATGCGCCGGGCTGGTACCATCCCGGCCGCTCGGGCACGCTGCGCCTCGGCTCCAACGCCATGGCCCATTTCGG CGAGATCCATCCCGCCGTGCTGGAGGCGCTGGACGTGGCCGGCCCGCTGGTGGCGTTCGAGATCATCCTCGACAAGATCC CCGAGCCCAAGGCCAAGGCCACGCGGGTGAAGCCCAATCTTGACCTCTCCGCCTTCCAGGCGGTGAAGCGCGACTTCGCC TTCGTGGTGGGCCGCGAGGTGGCGGCGGCGGACATCCTGAAGGCCGCCCAGGGCGCCGACAGGAAGCTGGTCACCGCCGT GGGCCTGTTCGACCTCTATGAGGGCAAGGGCATCGACCCCGACAAGAAGTCGGTGGCGGTGGAGGTCACCCTCCAGCCGC GCGAGCGCACCTTGACCGACAAGGACATCGAGGAGGTGGCGGGCCGCATCGTGGCGGAGGTCACCAAGAAGACCGGCGCC ACGCTGCGGGGCTGA
Upstream 100 bases:
>100_bases CTTCTTCGAGGCCGACGTGCGCTGGCTCTCCCACTACGGCTTCCGCCCGCTGGATTTCCCGACCCTCGCCGGCGGCCTGA GCGCGTAAGGAGCAGGACCC
Downstream 100 bases:
>100_bases CCCGACGCACCCCTCCCCATTCGCGGCGGCGCCCATGCTGCACCGCCGCGAATGCAATTTGCGAAAGGGGACGAAAGGGC CTTCGGGCCCGCCCCCAAAA
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MKFTFSWLQDHLEPTASFDAIVERLSLIGLEVEGVEDKARQLAPFVVGEVLTAEKHPNADKLKVCTVSIGKGEPIQVVCG APNARAGLKTVFAAPGTVIPTSGLELKIGKIRDVESRGMLCSARELGLSEEHDGILELPEDATPGAPFAEVLGLNDPVVE IAVTPNRADCLGVAGVARDLAAAGLGELMAPKVKPVDGTFPAPLGVTLEFGETGSLCPAFALRVVKGVKNGPSPQWMQDR LRAIGLRPINALVDVTNFMTFDRNRPLHVFDLAKVKGNLVVRRGRPGETLLALDGKTYALDETMCVIADENGVESLAGIM GGEASGCDEGTTDVVIESALWDAINIAQTGRKLGINSDARFRFERGVDPAFTLPGLELATHLIQEICGGEASEVVLAGAI PDTARTIRFPLSEVKRLAGLEASEQEIRDVLEALGFAVSGAAPVLDVVPPSWRGDIEGKADLVEEVVRILGLDRVPATEL PRGEDARKAVLTPLQLRSRKARRALAARGMVEAVTWSFVSQEAARMFGGGAPALALSNPIAAELSDMRPSLLPGLIKAAG TNAARGFADAALFEVGQIFLDDTPTGQRQAATGLRRGTAKPSGAGRHWSGTAGAVDVFDAKADATAALAACGAPVANLQV TTDAPGWYHPGRSGTLRLGSNAMAHFGEIHPAVLEALDVAGPLVAFEIILDKIPEPKAKATRVKPNLDLSAFQAVKRDFA FVVGREVAAADILKAAQGADRKLVTAVGLFDLYEGKGIDPDKKSVAVEVTLQPRERTLTDKDIEEVAGRIVAEVTKKTGA TLRG
Sequences:
>Translated_804_residues MKFTFSWLQDHLEPTASFDAIVERLSLIGLEVEGVEDKARQLAPFVVGEVLTAEKHPNADKLKVCTVSIGKGEPIQVVCG APNARAGLKTVFAAPGTVIPTSGLELKIGKIRDVESRGMLCSARELGLSEEHDGILELPEDATPGAPFAEVLGLNDPVVE IAVTPNRADCLGVAGVARDLAAAGLGELMAPKVKPVDGTFPAPLGVTLEFGETGSLCPAFALRVVKGVKNGPSPQWMQDR LRAIGLRPINALVDVTNFMTFDRNRPLHVFDLAKVKGNLVVRRGRPGETLLALDGKTYALDETMCVIADENGVESLAGIM GGEASGCDEGTTDVVIESALWDAINIAQTGRKLGINSDARFRFERGVDPAFTLPGLELATHLIQEICGGEASEVVLAGAI PDTARTIRFPLSEVKRLAGLEASEQEIRDVLEALGFAVSGAAPVLDVVPPSWRGDIEGKADLVEEVVRILGLDRVPATEL PRGEDARKAVLTPLQLRSRKARRALAARGMVEAVTWSFVSQEAARMFGGGAPALALSNPIAAELSDMRPSLLPGLIKAAG TNAARGFADAALFEVGQIFLDDTPTGQRQAATGLRRGTAKPSGAGRHWSGTAGAVDVFDAKADATAALAACGAPVANLQV TTDAPGWYHPGRSGTLRLGSNAMAHFGEIHPAVLEALDVAGPLVAFEIILDKIPEPKAKATRVKPNLDLSAFQAVKRDFA FVVGREVAAADILKAAQGADRKLVTAVGLFDLYEGKGIDPDKKSVAVEVTLQPRERTLTDKDIEEVAGRIVAEVTKKTGA TLRG >Mature_804_residues MKFTFSWLQDHLEPTASFDAIVERLSLIGLEVEGVEDKARQLAPFVVGEVLTAEKHPNADKLKVCTVSIGKGEPIQVVCG APNARAGLKTVFAAPGTVIPTSGLELKIGKIRDVESRGMLCSARELGLSEEHDGILELPEDATPGAPFAEVLGLNDPVVE IAVTPNRADCLGVAGVARDLAAAGLGELMAPKVKPVDGTFPAPLGVTLEFGETGSLCPAFALRVVKGVKNGPSPQWMQDR LRAIGLRPINALVDVTNFMTFDRNRPLHVFDLAKVKGNLVVRRGRPGETLLALDGKTYALDETMCVIADENGVESLAGIM GGEASGCDEGTTDVVIESALWDAINIAQTGRKLGINSDARFRFERGVDPAFTLPGLELATHLIQEICGGEASEVVLAGAI PDTARTIRFPLSEVKRLAGLEASEQEIRDVLEALGFAVSGAAPVLDVVPPSWRGDIEGKADLVEEVVRILGLDRVPATEL PRGEDARKAVLTPLQLRSRKARRALAARGMVEAVTWSFVSQEAARMFGGGAPALALSNPIAAELSDMRPSLLPGLIKAAG TNAARGFADAALFEVGQIFLDDTPTGQRQAATGLRRGTAKPSGAGRHWSGTAGAVDVFDAKADATAALAACGAPVANLQV TTDAPGWYHPGRSGTLRLGSNAMAHFGEIHPAVLEALDVAGPLVAFEIILDKIPEPKAKATRVKPNLDLSAFQAVKRDFA FVVGREVAAADILKAAQGADRKLVTAVGLFDLYEGKGIDPDKKSVAVEVTLQPRERTLTDKDIEEVAGRIVAEVTKKTGA TLRG
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=813, Percent_Identity=37.5153751537515, Blast_Score=498, Evalue=1e-142,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 84734; Mature: 84734
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTFSWLQDHLEPTASFDAIVERLSLIGLEVEGVEDKARQLAPFVVGEVLTAEKHPNAD CCEEHHHHHHHCCCCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCC KLKVCTVSIGKGEPIQVVCGAPNARAGLKTVFAAPGTVIPTSGLELKIGKIRDVESRGML CEEEEEEECCCCCCEEEEECCCCCCCCHHHHHCCCCCEECCCCCEEEECCCCCHHHCCCE CSARELGLSEEHDGILELPEDATPGAPFAEVLGLNDPVVEIAVTPNRADCLGVAGVARDL EEHHHCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH AAAGLGELMAPKVKPVDGTFPAPLGVTLEFGETGSLCPAFALRVVKGVKNGPSPQWMQDR HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHH LRAIGLRPINALVDVTNFMTFDRNRPLHVFDLAKVKGNLVVRRGRPGETLLALDGKTYAL HHHCCCCHHHHHHHHHHHHEECCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCEEEE DETMCVIADENGVESLAGIMGGEASGCDEGTTDVVIESALWDAINIAQTGRKLGINSDAR CCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHEEHHHHHHHHHHHHCCCCCCCCCCCC FRFERGVDPAFTLPGLELATHLIQEICGGEASEVVLAGAIPDTARTIRFPLSEVKRLAGL EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEECCHHHHHHHHCC EASEQEIRDVLEALGFAVSGAAPVLDVVPPSWRGDIEGKADLVEEVVRILGLDRVPATEL CCCHHHHHHHHHHHCHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC PRGEDARKAVLTPLQLRSRKARRALAARGMVEAVTWSFVSQEAARMFGGGAPALALSNPI CCCCCHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCH AAELSDMRPSLLPGLIKAAGTNAARGFADAALFEVGQIFLDDTPTGQRQAATGLRRGTAK HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCC PSGAGRHWSGTAGAVDVFDAKADATAALAACGAPVANLQVTTDAPGWYHPGRSGTLRLGS CCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEECC NAMAHFGEIHPAVLEALDVAGPLVAFEIILDKIPEPKAKATRVKPNLDLSAFQAVKRDFA CHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHH FVVGREVAAADILKAAQGADRKLVTAVGLFDLYEGKGIDPDKKSVAVEVTLQPRERTLTD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCH KDIEEVAGRIVAEVTKKTGATLRG HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKFTFSWLQDHLEPTASFDAIVERLSLIGLEVEGVEDKARQLAPFVVGEVLTAEKHPNAD CCEEHHHHHHHCCCCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCC KLKVCTVSIGKGEPIQVVCGAPNARAGLKTVFAAPGTVIPTSGLELKIGKIRDVESRGML CEEEEEEECCCCCCEEEEECCCCCCCCHHHHHCCCCCEECCCCCEEEECCCCCHHHCCCE CSARELGLSEEHDGILELPEDATPGAPFAEVLGLNDPVVEIAVTPNRADCLGVAGVARDL EEHHHCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH AAAGLGELMAPKVKPVDGTFPAPLGVTLEFGETGSLCPAFALRVVKGVKNGPSPQWMQDR HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHH LRAIGLRPINALVDVTNFMTFDRNRPLHVFDLAKVKGNLVVRRGRPGETLLALDGKTYAL HHHCCCCHHHHHHHHHHHHEECCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCEEEE DETMCVIADENGVESLAGIMGGEASGCDEGTTDVVIESALWDAINIAQTGRKLGINSDAR CCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHEEHHHHHHHHHHHHCCCCCCCCCCCC FRFERGVDPAFTLPGLELATHLIQEICGGEASEVVLAGAIPDTARTIRFPLSEVKRLAGL EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEECCHHHHHHHHCC EASEQEIRDVLEALGFAVSGAAPVLDVVPPSWRGDIEGKADLVEEVVRILGLDRVPATEL CCCHHHHHHHHHHHCHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC PRGEDARKAVLTPLQLRSRKARRALAARGMVEAVTWSFVSQEAARMFGGGAPALALSNPI CCCCCHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCH AAELSDMRPSLLPGLIKAAGTNAARGFADAALFEVGQIFLDDTPTGQRQAATGLRRGTAK HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCC PSGAGRHWSGTAGAVDVFDAKADATAALAACGAPVANLQVTTDAPGWYHPGRSGTLRLGS CCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEECC NAMAHFGEIHPAVLEALDVAGPLVAFEIILDKIPEPKAKATRVKPNLDLSAFQAVKRDFA CHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHH FVVGREVAAADILKAAQGADRKLVTAVGLFDLYEGKGIDPDKKSVAVEVTLQPRERTLTD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCH KDIEEVAGRIVAEVTKKTGATLRG HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA