| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yjeS [H]
Identifier: 154245753
GI number: 154245753
Start: 2036618
End: 2037775
Strand: Direct
Name: yjeS [H]
Synonym: Xaut_1809
Alternate gene names: 154245753
Gene position: 2036618-2037775 (Clockwise)
Preceding gene: 154245752
Following gene: 154245754
Centisome position: 38.36
GC content: 69.78
Gene sequence:
>1158_bases CTGACCGAGACGGCCGGCACGCCCCTCGAGGAGATCATCGCCGGCCTCGCCCGCACGGAAGGCTTCGATACCGTCGGCAT CACCCGTGCCGATGCCATCCCTCAGGCCGGCGCCCGGCTGAAGGATTGGGTGGCCGGCGGCGCCCATGGCGACATGGGCT GGATGGCCGAGACGCTGGAGCGCCGCGCGGATCCGGCCGTACTGTGGCCAGCCATCCGCTCCGTGATCATGCTGGGGCTC AATTACGGCCCGGCGGACGACCCCCGCGCGGTGCTGGCCCAACGCTCGGCCGGCGCCATCTCCGTCTATGCGCGGGCGGA GGATTACCACGACATCATCAAGCCCAAGCTGAAGCGCGTCGCCCGAGCCCTGCTGGCCGAGGCGCAGCGACGCGGGCTGG ACGGCGACGTGAAAGTGTTCGTGGATACTGCCCCGCTCATGGAGAAGCCGCTGGCGGCGGCGGCTGGGCTGGGCTGGCAG GGCCGGCACACCAACCTGGTCTCGCGGGATTTCGGCTCCTGGCTGTTCCTGGGCGCCATCGCCACCACGGTGGAGCTGAA GCCCTCCGCCCCGGAACAGGATCATTGCGGCTCCTGCCGCGCCTGTCTCGACGCCTGCCCAACGGCGGCCTTTCCCGCCC CTTACGTCATCGATGCGCGGCGCTGCGTGTCCTACCTCACCATCGAGCACAAGGGGCCGATCCCGCGCGAGCTGCGTCCA CTTATGGGCAACCGCATCTATGGCTGCGACGATTGCCTCGCCGCCTGCCCGTGGAACAAGTTCGCCGAGCTCGGGCGGGA AGTGAAGCTCGCGGCGCGGGCGGAGAATGACGCCCCGCCCCTGGCCGAACTGGTTGCGCTGGACGATGCCGCCTTCCGCG CCCGCTTCCCCAAAAGCCCCATCAAGCGGGTGGGGCGCGACCGTTTTGTGCGCAACGTGCTGGTGGCCATGGGAAATTCT GGGGATGCGGCACTATTGCCCCAGGTGGAGGCGCGGCTTGGCGATGCCTCGGCGCTGGTGCGCGGGGCGGCGGTGTGGGC ACTGGGGCAGCTAGCTGATCCAGATACCGTCTTCCGCCGCGCCCGTGAGGCCCTGCCGCAGGAAGACGACGCAGTGGTGC GAGCGGAATGGGCCGCCGCATCGGTGGAACAGCCCTAA
Upstream 100 bases:
>100_bases ACTGGTACGCGCGGATCAAGTCGCGCCCGACCTTCCGCGCCCTGCTGAACGAGAGCATTCCGGGCATGCCGCCGTCCAAG ACCTACGCGGACCTCGACTT
Downstream 100 bases:
>100_bases GTTCCGCAGCTGGTCGCGCCGGCGCTGTTTCCAACCGGCGCGTTTGCCGGTAGGATTGCCACCTCACGAACCATGAAGGG GGCGACAAGAGCTGGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLERRADPAVLWPAIRSVIMLGL NYGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRVARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQ GRHTNLVSRDFGSWLFLGAIATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRP LMGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSPIKRVGRDRFVRNVLVAMGNS GDAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRRAREALPQEDDAVVRAEWAAASVEQP
Sequences:
>Translated_385_residues MTETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLERRADPAVLWPAIRSVIMLGL NYGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRVARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQ GRHTNLVSRDFGSWLFLGAIATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRP LMGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSPIKRVGRDRFVRNVLVAMGNS GDAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRRAREALPQEDDAVVRAEWAAASVEQP >Mature_384_residues TETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLERRADPAVLWPAIRSVIMLGLN YGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRVARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQG RHTNLVSRDFGSWLFLGAIATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRPL MGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSPIKRVGRDRFVRNVLVAMGNSG DAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRRAREALPQEDDAVVRAEWAAASVEQP
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=332, Percent_Identity=41.566265060241, Blast_Score=265, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 41428; Mature: 41297
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLE CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHH RRADPAVLWPAIRSVIMLGLNYGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRV HCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH ARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQGRHTNLVSRDFGSWLFLGAI HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRP HHHEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHH LMGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSP HHCCCCCCHHHHHHHCCCHHHHHCCHHEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCH IKRVGRDRFVRNVLVAMGNSGDAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRR HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH AREALPQEDDAVVRAEWAAASVEQP HHHHCCCCCCCEEEEHHHHHCCCCC >Mature Secondary Structure TETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLE CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHH RRADPAVLWPAIRSVIMLGLNYGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRV HCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH ARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQGRHTNLVSRDFGSWLFLGAI HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRP HHHEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHH LMGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSP HHCCCCCCHHHHHHHCCCHHHHHCCHHEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCH IKRVGRDRFVRNVLVAMGNSGDAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRR HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH AREALPQEDDAVVRAEWAAASVEQP HHHHCCCCCCCEEEEHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]