Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is serB [C]

Identifier: 154245604

GI number: 154245604

Start: 1879353

End: 1880252

Strand: Direct

Name: serB [C]

Synonym: Xaut_1660

Alternate gene names: 154245604

Gene position: 1879353-1880252 (Clockwise)

Preceding gene: 154245602

Following gene: 154245610

Centisome position: 35.4

GC content: 69.78

Gene sequence:

>900_bases
ATGGCCTATGTCGCGACGCTGATCTCAAACCCATCTGCCCCGGCTTTGACCCGGGAGGCAATCCACGATGCGCGCGCGGT
GCTGCCCGAAGCGCAGGAGGCCGTGGTGCTCGCCCCCGACGTGGCCGTGGACATCCATTTCGCCCCGCCGCTGGGCACCG
ATGCCCGGGAACTGGCCGATGCGGTCCGCGCCGCCCTCGGGGATGCGCCCATCGACGTGGTGGTGCAGCTAGAGGCGGCC
CGGCGCAAGCAGCTTTTCCTCGCCGACATGGATTCCACCATGATCGGGCAGGAATGCATCGACGAACTGGCGGATCTCGT
TGGCGTGAAGGCCCATGTGGCCGCCATCACCGAGCGGGCCATGCGCGGGGAGATCGCCTTCGAGCCGGCGCTGCGCGAGC
GGGTGGCGCTGCTGCGCGGCCTGCCGGCCGGCGTGGTGGCCGACGTGCTGCGCGAGCGCATCAGCCTCACCCCCGGCGGG
CTCGAGCTGGTGGGTACCATGAAGGCCAACGGCGCCTATACGGCGCTGGTCTCCGGCGGCTTCACCGTGTTTACGAGCGC
CATCGCCGAGCGCATCGGCTTCGACGAGCACCGGGCCAACATCCTGCTCATCGACGAGGACCGCTTCGTCGGCGCGGTGG
CGGAGCCCATCCTCGGCCGCGATGCCAAGCTCGCCGCCCTCGAGGAACTGCGCGACCGCATGCACCTTGCCCCGTCCGAG
ACCATGGCGGTGGGCGACGGCGCCAACGACCTCGCCATGCTGCAGGAGGCCGGGGTCGGCGTCGCCTATCACGCCAAGCC
AGCGGTGGCGGCTGCCGCCCATGTGCGCATCGATTACGGCGACCTCACCGCTTTGCTCTACATGCAGGGCTATGCGCTGA
GCGAGTTCCACACCGCCTGA

Upstream 100 bases:

>100_bases
CTCGGCGAGCGCCATCGCGAGGGCCGACTTGCCGCTGGCGGTGGGACCTGCGATGAGCACCGCCTGCGGCCCATTCCCCT
GTTCGAGTACCGATACTGCC

Downstream 100 bases:

>100_bases
GGCGGGATAAGCTCTCCCTGTACCCTTACGCCGCCGTCATGCCCCGGACCAGCCGGGGATGACGGCGGCGCGTCAGCTCA
GTTCAGCGGGATCGTCACGA

Product: phosphoserine phosphatase SerB

Products: NA

Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MAYVATLISNPSAPALTREAIHDARAVLPEAQEAVVLAPDVAVDIHFAPPLGTDARELADAVRAALGDAPIDVVVQLEAA
RRKQLFLADMDSTMIGQECIDELADLVGVKAHVAAITERAMRGEIAFEPALRERVALLRGLPAGVVADVLRERISLTPGG
LELVGTMKANGAYTALVSGGFTVFTSAIAERIGFDEHRANILLIDEDRFVGAVAEPILGRDAKLAALEELRDRMHLAPSE
TMAVGDGANDLAMLQEAGVGVAYHAKPAVAAAAHVRIDYGDLTALLYMQGYALSEFHTA

Sequences:

>Translated_299_residues
MAYVATLISNPSAPALTREAIHDARAVLPEAQEAVVLAPDVAVDIHFAPPLGTDARELADAVRAALGDAPIDVVVQLEAA
RRKQLFLADMDSTMIGQECIDELADLVGVKAHVAAITERAMRGEIAFEPALRERVALLRGLPAGVVADVLRERISLTPGG
LELVGTMKANGAYTALVSGGFTVFTSAIAERIGFDEHRANILLIDEDRFVGAVAEPILGRDAKLAALEELRDRMHLAPSE
TMAVGDGANDLAMLQEAGVGVAYHAKPAVAAAAHVRIDYGDLTALLYMQGYALSEFHTA
>Mature_298_residues
AYVATLISNPSAPALTREAIHDARAVLPEAQEAVVLAPDVAVDIHFAPPLGTDARELADAVRAALGDAPIDVVVQLEAAR
RKQLFLADMDSTMIGQECIDELADLVGVKAHVAAITERAMRGEIAFEPALRERVALLRGLPAGVVADVLRERISLTPGGL
ELVGTMKANGAYTALVSGGFTVFTSAIAERIGFDEHRANILLIDEDRFVGAVAEPILGRDAKLAALEELRDRMHLAPSET
MAVGDGANDLAMLQEAGVGVAYHAKPAVAAAAHVRIDYGDLTALLYMQGYALSEFHTA

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Homo sapiens, GI46249388, Length=170, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1790849, Length=232, Percent_Identity=40.0862068965517, Blast_Score=151, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI115534454, Length=182, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115534456, Length=178, Percent_Identity=32.0224719101124, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6321647, Length=231, Percent_Identity=36.7965367965368, Blast_Score=157, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24661601, Length=190, Percent_Identity=31.5789473684211, Blast_Score=75, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR023190
- InterPro:   IPR004469 [H]

Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 31605; Mature: 31473

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYVATLISNPSAPALTREAIHDARAVLPEAQEAVVLAPDVAVDIHFAPPLGTDARELAD
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCCHHHHHH
AVRAALGDAPIDVVVQLEAARRKQLFLADMDSTMIGQECIDELADLVGVKAHVAAITERA
HHHHHHCCCCEEEEEEECHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRGEIAFEPALRERVALLRGLPAGVVADVLRERISLTPGGLELVGTMKANGAYTALVSGG
HCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCC
FTVFTSAIAERIGFDEHRANILLIDEDRFVGAVAEPILGRDAKLAALEELRDRMHLAPSE
HHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
TMAVGDGANDLAMLQEAGVGVAYHAKPAVAAAAHVRIDYGDLTALLYMQGYALSEFHTA
CEEECCCCHHHHHHHHCCCCEEEECCCHHHHEEEEEEEHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure 
AYVATLISNPSAPALTREAIHDARAVLPEAQEAVVLAPDVAVDIHFAPPLGTDARELAD
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCCHHHHHH
AVRAALGDAPIDVVVQLEAARRKQLFLADMDSTMIGQECIDELADLVGVKAHVAAITERA
HHHHHHCCCCEEEEEEECHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRGEIAFEPALRERVALLRGLPAGVVADVLRERISLTPGGLELVGTMKANGAYTALVSGG
HCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCC
FTVFTSAIAERIGFDEHRANILLIDEDRFVGAVAEPILGRDAKLAALEELRDRMHLAPSE
HHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
TMAVGDGANDLAMLQEAGVGVAYHAKPAVAAAAHVRIDYGDLTALLYMQGYALSEFHTA
CEEECCCCHHHHHHHHCCCCEEEECCCHHHHEEEEEEEHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]