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The map label for this gene is cycH [H]

Identifier: 154245599

GI number: 154245599

Start: 1874217

End: 1875440

Strand: Direct

Name: cycH [H]

Synonym: Xaut_1655

Alternate gene names: 154245599

Gene position: 1874217-1875440 (Clockwise)

Preceding gene: 154245596

Following gene: 154245600

Centisome position: 35.3

GC content: 71.9

Gene sequence:

>1224_bases
GTGGCCTATGCAGCCATGCTTTCACCCGCTAACGGCTCTGAGGTGATGATCTCACTGTCCCTGTTCGCAGCCTTTGCGCT
CATGACCGCCCTCGCGGCGCTCGCCGTGCTGTGGCCCCTGTCGCGCGTCCGCGCCGCGCGGGCCGCGCATGATGCCGACC
TTGCGGTCTATCGCGACCAGCTCGCCGAGATCGCCCGCGACGCCAAGTCCGGCCGCCTGCCCAAGGCCGAGGCGGAAGCC
GCGCGCATCGAGGTGGCGCGGCGCATGCTCGCGGCCGATTCCGCCCAGCAGGCGGCTGCGACCGGGGATCCGGCGCGGGT
GACGCGCCAGACCACATGGCGCCGTCGCGCCGCCGCCGTGTTCGCCCTGCTGTTCATTCCGGTGTTCGCGGCCAGCCTCT
ATGGCCTGCTCGGCTCGCCCCGCCTTCCCGGCGCGCCTTTGGCCGAGCGCCTGACGGCGGCGCCCGATCGCAGCGATGTC
GCCATCCTGGTGCGGCGGGTGGAGGAGCATCTCCAGAAGAATCCCAATGACGGGGCGGGCTACGAGATCCTGGCGCCGGT
CTATCTGCGCATGGGACGGCCGGAGGATGCCGCCCGCGCCTATGCCGAGGCCATCCGCATTCTCGGACCCTCCGCTGCGC
GCCATTCGTCGCGGGGCGAAGCGTTGGTGGTCGCCTCCGACGGCCTGGTGACGGCCGATGCCGCCCGCGCCTTCACCGAT
GCGCTGGCCCTCGACCCCAATGAGCCGCGCTCGGCCTATTTCCTCGGCCTCGCCGCCGAGCAGGATGGCCGCGCCGAGGA
TGCGGCACGAATCTGGGGCCAGCTGCTTGCCCGCACGCCTGCCAATGCGCCCTATCGGCCGGTGGTGGCGGCGGCCCTCG
CCCGGGTGGGCGGCACGGCTTCGGCGGCCGCGGCTGCGCCGGCCCAGCCCGGTCCGGCAGCGGCGGATGTGGCGGCGGCG
GCCTCCATGTCGTCCGACGAGCGCAACGCCATGGTTCGTGGCATGGTGGCCCGCCTCGCCGAGCGGCTGGACGCCGAGCC
CAACGATATCGAGGGCTGGCTGCGCCTGGTGCGGGCCTATGGCGTGCTCGGCGACAAGGACAAGGCGGCGGAGGCCCTGA
AAAAGGCACGTGCAGCCTTCAAGGACAATGCAGAAGCTCTCGGGCGGCTCGATGCCGCCGAGAAGGAGCTCGCGGCAAGG
ACGGGAGCGGGAGAAAAAGGATGA

Upstream 100 bases:

>100_bases
TGTACCGGATCGGCTGTGCGAAGTCGATTGTGCCTGCCGTGCCCCGGGGCCGATCACGAGTCCGAGTGTCCCCTGCGGCT
CCGCGCCGCTGGGACGGCAT

Downstream 100 bases:

>100_bases
CGCGCAAAGGCCGGCGGCTGGTGCTCATCGGAGCAGGACTTGGCGTGCTCGCGCTGGCGGCGGGGCTCATCCTGTCCGCG
CTCAACGACACCATCGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MAYAAMLSPANGSEVMISLSLFAAFALMTALAALAVLWPLSRVRAARAAHDADLAVYRDQLAEIARDAKSGRLPKAEAEA
ARIEVARRMLAADSAQQAAATGDPARVTRQTTWRRRAAAVFALLFIPVFAASLYGLLGSPRLPGAPLAERLTAAPDRSDV
AILVRRVEEHLQKNPNDGAGYEILAPVYLRMGRPEDAARAYAEAIRILGPSAARHSSRGEALVVASDGLVTADAARAFTD
ALALDPNEPRSAYFLGLAAEQDGRAEDAARIWGQLLARTPANAPYRPVVAAALARVGGTASAAAAAPAQPGPAAADVAAA
ASMSSDERNAMVRGMVARLAERLDAEPNDIEGWLRLVRAYGVLGDKDKAAEALKKARAAFKDNAEALGRLDAAEKELAAR
TGAGEKG

Sequences:

>Translated_407_residues
MAYAAMLSPANGSEVMISLSLFAAFALMTALAALAVLWPLSRVRAARAAHDADLAVYRDQLAEIARDAKSGRLPKAEAEA
ARIEVARRMLAADSAQQAAATGDPARVTRQTTWRRRAAAVFALLFIPVFAASLYGLLGSPRLPGAPLAERLTAAPDRSDV
AILVRRVEEHLQKNPNDGAGYEILAPVYLRMGRPEDAARAYAEAIRILGPSAARHSSRGEALVVASDGLVTADAARAFTD
ALALDPNEPRSAYFLGLAAEQDGRAEDAARIWGQLLARTPANAPYRPVVAAALARVGGTASAAAAAPAQPGPAAADVAAA
ASMSSDERNAMVRGMVARLAERLDAEPNDIEGWLRLVRAYGVLGDKDKAAEALKKARAAFKDNAEALGRLDAAEKELAAR
TGAGEKG
>Mature_406_residues
AYAAMLSPANGSEVMISLSLFAAFALMTALAALAVLWPLSRVRAARAAHDADLAVYRDQLAEIARDAKSGRLPKAEAEAA
RIEVARRMLAADSAQQAAATGDPARVTRQTTWRRRAAAVFALLFIPVFAASLYGLLGSPRLPGAPLAERLTAAPDRSDVA
ILVRRVEEHLQKNPNDGAGYEILAPVYLRMGRPEDAARAYAEAIRILGPSAARHSSRGEALVVASDGLVTADAARAFTDA
LALDPNEPRSAYFLGLAAEQDGRAEDAARIWGQLLARTPANAPYRPVVAAALARVGGTASAAAAAPAQPGPAAADVAAAA
SMSSDERNAMVRGMVARLAERLDAEPNDIEGWLRLVRAYGVLGDKDKAAEALKKARAAFKDNAEALGRLDAAEKELAART
GAGEKG

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42613; Mature: 42482

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYAAMLSPANGSEVMISLSLFAAFALMTALAALAVLWPLSRVRAARAAHDADLAVYRDQ
CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEIARDAKSGRLPKAEAEAARIEVARRMLAADSAQQAAATGDPARVTRQTTWRRRAAAV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHH
FALLFIPVFAASLYGLLGSPRLPGAPLAERLTAAPDRSDVAILVRRVEEHLQKNPNDGAG
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
YEILAPVYLRMGRPEDAARAYAEAIRILGPSAARHSSRGEALVVASDGLVTADAARAFTD
CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCEEHHHHHHHHH
ALALDPNEPRSAYFLGLAAEQDGRAEDAARIWGQLLARTPANAPYRPVVAAALARVGGTA
HHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
SAAAAAPAQPGPAAADVAAAASMSSDERNAMVRGMVARLAERLDAEPNDIEGWLRLVRAY
HHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GVLGDKDKAAEALKKARAAFKDNAEALGRLDAAEKELAARTGAGEKG
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AYAAMLSPANGSEVMISLSLFAAFALMTALAALAVLWPLSRVRAARAAHDADLAVYRDQ
CCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEIARDAKSGRLPKAEAEAARIEVARRMLAADSAQQAAATGDPARVTRQTTWRRRAAAV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHH
FALLFIPVFAASLYGLLGSPRLPGAPLAERLTAAPDRSDVAILVRRVEEHLQKNPNDGAG
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
YEILAPVYLRMGRPEDAARAYAEAIRILGPSAARHSSRGEALVVASDGLVTADAARAFTD
CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCEEHHHHHHHHH
ALALDPNEPRSAYFLGLAAEQDGRAEDAARIWGQLLARTPANAPYRPVVAAALARVGGTA
HHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
SAAAAAPAQPGPAAADVAAAASMSSDERNAMVRGMVARLAERLDAEPNDIEGWLRLVRAY
HHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GVLGDKDKAAEALKKARAAFKDNAEALGRLDAAEKELAARTGAGEKG
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8231805; 12597275 [H]