Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 154245596

GI number: 154245596

Start: 1870576

End: 1870947

Strand: Direct

Name: yidD [C]

Synonym: Xaut_1652

Alternate gene names: 154245596

Gene position: 1870576-1870947 (Clockwise)

Preceding gene: 154245594

Following gene: 154245599

Centisome position: 35.23

GC content: 70.7

Gene sequence:

>372_bases
ATGGACGGCGAACGGGCAGGGGGCGGACCGGCGGACGCCAATGCGGCGCGGTCGGGGCTGAGAGCCATCATCGGCCGGCT
GCCGCGCCATGCCCTGCGCCTGCCGATCCTGTTCTATCGCTACACCCTGTCCTCCTTCATGGGCCGGCAGTGCCGCTACC
TACCCACCTGCTCGGAATATGCGGAGGAGGCGGTGATGCGCCATGGCGCGCTCGCCGGCTCGGTGATGGCCACCGCCCGC
ATCTGCCGCTGCAATCCCTGGGGCGGGCATGGCTACGATCCGGTGCCCCGCTGCCTGCCGGCGGAGGCGCGATGGTATCG
CTTCTGGCGCTATGGCGTCTGGCGCATGCCCAAGGGGCCGGACGAAGCCTGA

Upstream 100 bases:

>100_bases
GGGACCAACACGGCCCGGCCACGTTTGTGGGATTGGATGACGCCATCAGCGCCGTCCACGATGGCGAATCTGAGGCGATG
GAAAGCACAACGGGAACCAC

Downstream 100 bases:

>100_bases
GGGCTTTGGCCCATATCAGCCGTCCGTGCCCCAGCCGACTGCAACGCAGCGCAGTGGAAGGAGAGTCGGGGCCCAGCGCA
GGGACTATGCCATAGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MDGERAGGGPADANAARSGLRAIIGRLPRHALRLPILFYRYTLSSFMGRQCRYLPTCSEYAEEAVMRHGALAGSVMATAR
ICRCNPWGGHGYDPVPRCLPAEARWYRFWRYGVWRMPKGPDEA

Sequences:

>Translated_123_residues
MDGERAGGGPADANAARSGLRAIIGRLPRHALRLPILFYRYTLSSFMGRQCRYLPTCSEYAEEAVMRHGALAGSVMATAR
ICRCNPWGGHGYDPVPRCLPAEARWYRFWRYGVWRMPKGPDEA
>Mature_123_residues
MDGERAGGGPADANAARSGLRAIIGRLPRHALRLPILFYRYTLSSFMGRQCRYLPTCSEYAEEAVMRHGALAGSVMATAR
ICRCNPWGGHGYDPVPRCLPAEARWYRFWRYGVWRMPKGPDEA

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002696
- ProDom:   PD004225 [H]

Pfam domain/function: PF01809 DUF37 [H]

EC number: NA

Molecular weight: Translated: 13818; Mature: 13818

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGERAGGGPADANAARSGLRAIIGRLPRHALRLPILFYRYTLSSFMGRQCRYLPTCSEY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AEEAVMRHGALAGSVMATARICRCNPWGGHGYDPVPRCLPAEARWYRFWRYGVWRMPKGP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
DEA
CCC
>Mature Secondary Structure
MDGERAGGGPADANAARSGLRAIIGRLPRHALRLPILFYRYTLSSFMGRQCRYLPTCSEY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AEEAVMRHGALAGSVMATARICRCNPWGGHGYDPVPRCLPAEARWYRFWRYGVWRMPKGP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
DEA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA