| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is nutA [H]
Identifier: 154245466
GI number: 154245466
Start: 1728687
End: 1730378
Strand: Reverse
Name: nutA [H]
Synonym: Xaut_1519
Alternate gene names: 154245466
Gene position: 1730378-1728687 (Counterclockwise)
Preceding gene: 154245467
Following gene: 154245465
Centisome position: 32.59
GC content: 66.31
Gene sequence:
>1692_bases ATGATCTCAAGGCGCGATTTTCTGTCCGCCGGGACGGCGCTCGCCGGCCTTCTCGCCGCCTCGGGACCGGGGCTGGCGCA GGCCATCGGCGGGCAATTGACCCAGAATGACCTCTTGAAGTTCGGCAGGATCGGCACCTTCACTATTCTGCATGTCACCG ACATCCATGCCCAGCTCAATCCGCTCTACTTCCGTGAACCGTCTATCAATTTGGGCGTCGGCGACGCGCGGGGCGTGCCG CCGCACCTGACCGATATGGCCTTCCTCAACTACTTCAACATCAGGCCGGGCACGCGCGACGCCTATGCGCTGACTTCGGA GGACTTCACGGCGCTCGCCCGCAGCTATGGCCGCATGGGCGGGGTGGACCGCATCGCCACCCTCATCAAGGCCATCCGCG CCGAGCGGGGGGCGGACAAGGTGCTGCTGCTCGACGGCGGCGACGGGCTGCAGGGCTCGTGGTCGTCGCTGCAGACCAAG GGCGAGGACATGGTGCGGGTGTTCTCCGCCCTCGGGCTCGACGCCATGGTGGGGCACTGGGAGTTCACCTACGGCGCCGA CCGGGTCATGGCGATCAAGGAGAAGGCCCCCTTCGCCTTCCTCGCCCAGAATGTGCGCTCCACCGAATGGGGCGAGCCGG TGTTCGATGCGGCGAAGACCTTCGAGAAGGGCGGCGCCAGGATCGCCGTCATCGGCCAGGCCTTCCCGCGTACCCCCATC TCCAACCCGCGCTGGATGATCCCGGACTGGGAGTTCGGCATCCGCGAGGAGGAGATGCAAAGACAAGTGGATGCTGCCCG TGCCGGCGGCGCCGACGTGGTGGTGCTGCTCTCCCACAACGGCTTCGACGTGGACCGCAAGATGGCCACGCGGGTGAAGG GCATCGACGTGATCCTCACCGCCCACACCCATGATGCCATGCCCGCCGCCACCGAGGTGGGCAAGACTCTGCTGATCGCC ACCGGCTCCCACGGCAAGTTCCTGTCCCGCCTCGATCTCGACGTTCAGGACAAGAAGGTCACCGGCTACAGGTTCCAGCT GATCCCGGTGTTCTCGGACGTGATCGCGCCCGATCCGGAGATGACGAAGCTGGTGGCGGACATCCGCGCGCCTTATGCCA AGGACCTTGCCCGTGAGGTGGGCCGGGCGGAAAGCCTGCTGTACCGGCGCGGCAACTTCAACGGCACCTTCGACGACATG ATCTGCGACGCGCTCCTCAAGGAGCGGGACGCGGAAATCGCCCTTTCCCCCGGCTTTCGCTGGGGCGGCACGCTGCTCCC GGGCGATCCCATCACCTTCGAGACCATCTCCAACGCCACCGCCATCACCTATCCGGCCTGCTACCGCAACACCATGACCG GCCGGCAGCTGAAGGACGTGCTGGAGGATGTGGCCGACAACATCTTCCATCCCGACCCCTATTTCCAGGGCGGCGGCGAC ATGGTGCGGGTGGGGGGCGTGGGCTATGCCATCGACGTGTCGAAGGGCGTCGGCCAGCGCATCTCCGACCTTACCTTCCT GAAGACCGGCAAGCCGCTGGAGGCGGACAAGACCTATACGGTCGCCGGCTGGGCCTCGGTCGCGCAGACCGTGGAAGGCC CGCCCATCTGGGAGGTGGTGGAGCGCTACGTGGCCAACGCCAAGACGGTGAAGATCGCGCCCAATGCGTCGGTGAAGGTG ACGGGGGCGTGA
Upstream 100 bases:
>100_bases TAAATCCGCCCCTTATCTGGATTTCGGGAGCGCTACACATCCGGATCACGAGGTGATCCGGACAACGCTACCCCCATGAC TTTTGGAAAGCGCGATCACC
Downstream 100 bases:
>100_bases GGTAAATGCCGACTTGCCCCCGACAAGCCGGGCCGCCTCAGGCACCCGATTTCGCCGAAAATATTCAAACAAACGAATAA AAGAATACCAGGGAGGACAC
Product: 5'-nucleotidase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLNPLYFREPSINLGVGDARGVP PHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMGGVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTK GEDMVRVFSALGLDAMVGHWEFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILTAHTHDAMPAATEVGKTLLIA TGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPEMTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDM ICDALLKERDAEIALSPGFRWGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVVERYVANAKTVKIAPNASVKV TGA
Sequences:
>Translated_563_residues MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLNPLYFREPSINLGVGDARGVP PHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMGGVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTK GEDMVRVFSALGLDAMVGHWEFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILTAHTHDAMPAATEVGKTLLIA TGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPEMTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDM ICDALLKERDAEIALSPGFRWGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVVERYVANAKTVKIAPNASVKV TGA >Mature_563_residues MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLNPLYFREPSINLGVGDARGVP PHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMGGVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTK GEDMVRVFSALGLDAMVGHWEFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILTAHTHDAMPAATEVGKTLLIA TGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPEMTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDM ICDALLKERDAEIALSPGFRWGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVVERYVANAKTVKIAPNASVKV TGA
Specific function: Degradation of extracellular 5'-nucleotides for nutritional needs [H]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=471, Percent_Identity=25.0530785562633, Blast_Score=90, Evalue=7e-18, Organism=Escherichia coli, GI1786687, Length=457, Percent_Identity=22.7571115973742, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 61116; Mature: 61116
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLN CCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEHHHHCC PLYFREPSINLGVGDARGVPPHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMG CEEEECCCCEECCCCCCCCCCCHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHHHCCC GVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTKGEDMVRVFSALGLDAMVGHW CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHCHHHHHCCE EFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI EEECCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILT CCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEE AHTHDAMPAATEVGKTLLIATGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPE ECCCCCCCCHHHCCCEEEEEECCCCCCHHHCCCCCCCCEECCEEEEEEEHHHHHHCCCHH MTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDMICDALLKERDAEIALSPGFR HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC WGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD CCCEECCCCCEEEEECCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVV EEEECCEEEEEECCCCCCHHHHCEEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHH ERYVANAKTVKIAPNASVKVTGA HHHHCCCEEEEECCCCCEEEECC >Mature Secondary Structure MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLN CCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEHHHHCC PLYFREPSINLGVGDARGVPPHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMG CEEEECCCCEECCCCCCCCCCCHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHHHCCC GVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTKGEDMVRVFSALGLDAMVGHW CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHCHHHHHCCE EFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI EEECCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILT CCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEE AHTHDAMPAATEVGKTLLIATGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPE ECCCCCCCCHHHCCCEEEEEECCCCCCHHHCCCCCCCCEECCEEEEEEEHHHHHHCCCHH MTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDMICDALLKERDAEIALSPGFR HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC WGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD CCCEECCCCCEEEEECCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVV EEEECCEEEEEECCCCCCHHHHCEEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHH ERYVANAKTVKIAPNASVKVTGA HHHHCCCEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA