| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is tag [H]
Identifier: 154245364
GI number: 154245364
Start: 1620874
End: 1621545
Strand: Direct
Name: tag [H]
Synonym: Xaut_1417
Alternate gene names: 154245364
Gene position: 1620874-1621545 (Clockwise)
Preceding gene: 154245363
Following gene: 154245365
Centisome position: 30.53
GC content: 68.01
Gene sequence:
>672_bases ATGGCGGAGCCGAAGGCGGGAAACGCGAACAAGAGTGCGCCGGAGGCGGAAAGCGCGAACGGGATCGATCTGGCGGTGAA GGCGGAACGCGCGCCGCTGCTCCAGCACGGGGATGGGCGGGCGCGCTGCTTCTGGTGCGGCACCGACCCGTTCTACATGG CCTATCACGACGACGAATGGGGCGTGCCCGAGCGCGACAGTCGCGCCCTGTTCGAGAAGCTGCTGCTGGATGGATTCCAG GCCGGCCTCTCGTGGATCACCATCCTGCGGAAGCGGGAGAATTTCCGCCGGGCCTTCGACGGCTTCGATCCCGAGACGAT GGCCCGCTACGACGCAGCCAAGGTGGAGGCCCTCATGGCCGACGCCGGCATCGTGCGCAACCGGGCCAAGGTGGAGGGGG CGGTTGCCTCCGCCCGCGCCTATCTCGACCTCCAGGACAAGGGCATCGCCTTTTCCGACCTGATGTGGGAGGCGGTGGAC GGCGAGACGCGGGTGAACCGGCCGAAGCGCATCGCCGACGTGCCGGCGCAGACGGCACAGTCCGTCGCCTTGTCCAAGCG GTTGAAGGGACTGGGCTTCAAGTTCGTCGGTCCCACCATCGTCTATGCCGCCATGCAGGCCTGCGGGCTGGTGGACGACC ACCTCGCCGGTTGTCACTGCGCCAGGCCCTAG
Upstream 100 bases:
>100_bases CGGTGGAGCTGCGCCGTCCCGATTGGGCCGTCTTTTCCATGGAGTGGGAAAAGAAGGTGAGCGAGCTGGACCGCAAGTTC AAGGGAAGCTGAGAGGGGCG
Downstream 100 bases:
>100_bases GCTGCCGCGACAATGGGTCGGGGATGGCGGCGGACTTTGTGGCACGCGCCCCTTTCATCGCCGGCGGGCGACGCCTATAT TCGTTCTGCCGACGCAAGTC
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MAEPKAGNANKSAPEAESANGIDLAVKAERAPLLQHGDGRARCFWCGTDPFYMAYHDDEWGVPERDSRALFEKLLLDGFQ AGLSWITILRKRENFRRAFDGFDPETMARYDAAKVEALMADAGIVRNRAKVEGAVASARAYLDLQDKGIAFSDLMWEAVD GETRVNRPKRIADVPAQTAQSVALSKRLKGLGFKFVGPTIVYAAMQACGLVDDHLAGCHCARP
Sequences:
>Translated_223_residues MAEPKAGNANKSAPEAESANGIDLAVKAERAPLLQHGDGRARCFWCGTDPFYMAYHDDEWGVPERDSRALFEKLLLDGFQ AGLSWITILRKRENFRRAFDGFDPETMARYDAAKVEALMADAGIVRNRAKVEGAVASARAYLDLQDKGIAFSDLMWEAVD GETRVNRPKRIADVPAQTAQSVALSKRLKGLGFKFVGPTIVYAAMQACGLVDDHLAGCHCARP >Mature_222_residues AEPKAGNANKSAPEAESANGIDLAVKAERAPLLQHGDGRARCFWCGTDPFYMAYHDDEWGVPERDSRALFEKLLLDGFQA GLSWITILRKRENFRRAFDGFDPETMARYDAAKVEALMADAGIVRNRAKVEGAVASARAYLDLQDKGIAFSDLMWEAVDG ETRVNRPKRIADVPAQTAQSVALSKRLKGLGFKFVGPTIVYAAMQACGLVDDHLAGCHCARP
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=179, Percent_Identity=51.9553072625698, Blast_Score=209, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 24433; Mature: 24302
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPKAGNANKSAPEAESANGIDLAVKAERAPLLQHGDGRARCFWCGTDPFYMAYHDDEW CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCEEEEEECCCCEEEEEECCCC GVPERDSRALFEKLLLDGFQAGLSWITILRKRENFRRAFDGFDPETMARYDAAKVEALMA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DAGIVRNRAKVEGAVASARAYLDLQDKGIAFSDLMWEAVDGETRVNRPKRIADVPAQTAQ HHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHH SVALSKRLKGLGFKFVGPTIVYAAMQACGLVDDHLAGCHCARP HHHHHHHHHHCCEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCC >Mature Secondary Structure AEPKAGNANKSAPEAESANGIDLAVKAERAPLLQHGDGRARCFWCGTDPFYMAYHDDEW CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCEEEEEECCCCEEEEEECCCC GVPERDSRALFEKLLLDGFQAGLSWITILRKRENFRRAFDGFDPETMARYDAAKVEALMA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DAGIVRNRAKVEGAVASARAYLDLQDKGIAFSDLMWEAVDGETRVNRPKRIADVPAQTAQ HHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHH SVALSKRLKGLGFKFVGPTIVYAAMQACGLVDDHLAGCHCARP HHHHHHHHHHCCEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]