| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245245
Identifier: 154245245
GI number: 154245245
Start: 1494503
End: 1494901
Strand: Reverse
Name: 154245245
Synonym: Xaut_1297
Alternate gene names: NA
Gene position: 1494901-1494503 (Counterclockwise)
Preceding gene: 154245246
Following gene: 154245244
Centisome position: 28.16
GC content: 67.42
Gene sequence:
>399_bases ATGACATCACCCTGCTATTGCACCTTGTTGCGCACCGCCACCCGGAAGGTCGCTGCGGCCTATGACGCGGCGCTGGCGCC GGTGGGCATCAACATCGCGCAATATGCGCTGCTGCGGATGATCCAGAACCGCCAACAGGTGAGCCTCACCGAACTTGGCC GCGTCGCCGATCTCGACCGCTCCACCATCGGCCGAAACGTCAAGGTGCTGGAGCGCGACGGCCTGGTGAAGACCGCGCGC GGCGAGGACCAGCGCGAAGCCGTGGTCAGCCTCGCTCCGGGCGGGATCGAGGCACTGGCGGCGGCAACGCCCCTGTGGGA AGCCTGCCAGCGCCAGATCGAGAAGCGCCTGGGCGCCGACAAGATCGAAGCCCTGCGCGCCATTGCGAATGCCGTGTGA
Upstream 100 bases:
>100_bases CATGCTCCGGCGCTTTTTCATGCCCGGCCTTCGCACGCCCCTGCGCTCACGATCCAACGACGCATGGACAGGGTCGCAAT AAGCGGGTATATGCACATAC
Downstream 100 bases:
>100_bases TTTTTGCGGACTAAAACGGGCATATGCCCGTAGATTGGATATCGGATGAACGCCCCCGCAGATTTCCCCACGCGCCAGCC ACGGCTCGCTGCCTTCCTCG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; MarR Family Regulatory Protein; Regulatory Protein; MarR Family Regulatory Helix-Turn-Helix Protein
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTSPCYCTLLRTATRKVAAAYDAALAPVGINIAQYALLRMIQNRQQVSLTELGRVADLDRSTIGRNVKVLERDGLVKTAR GEDQREAVVSLAPGGIEALAAATPLWEACQRQIEKRLGADKIEALRAIANAV
Sequences:
>Translated_132_residues MTSPCYCTLLRTATRKVAAAYDAALAPVGINIAQYALLRMIQNRQQVSLTELGRVADLDRSTIGRNVKVLERDGLVKTAR GEDQREAVVSLAPGGIEALAAATPLWEACQRQIEKRLGADKIEALRAIANAV >Mature_131_residues TSPCYCTLLRTATRKVAAAYDAALAPVGINIAQYALLRMIQNRQQVSLTELGRVADLDRSTIGRNVKVLERDGLVKTARG EDQREAVVSLAPGGIEALAAATPLWEACQRQIEKRLGADKIEALRAIANAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14245; Mature: 14113
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPCYCTLLRTATRKVAAAYDAALAPVGINIAQYALLRMIQNRQQVSLTELGRVADLDR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCH STIGRNVKVLERDGLVKTARGEDQREAVVSLAPGGIEALAAATPLWEACQRQIEKRLGAD HHHCCCCEEECCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHCHH KIEALRAIANAV HHHHHHHHHHCC >Mature Secondary Structure TSPCYCTLLRTATRKVAAAYDAALAPVGINIAQYALLRMIQNRQQVSLTELGRVADLDR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCH STIGRNVKVLERDGLVKTARGEDQREAVVSLAPGGIEALAAATPLWEACQRQIEKRLGAD HHHCCCCEEECCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHCHH KIEALRAIANAV HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA