Click here to switch to the map view.

The map label for this gene is 154245246

Identifier: 154245246

GI number: 154245246

Start: 1495069

End: 1496328

Strand: Reverse

Name: 154245246

Synonym: Xaut_1298

Alternate gene names: NA

Gene position: 1496328-1495069 (Counterclockwise)

Preceding gene: 154245247

Following gene: 154245245

Centisome position: 28.19

GC content: 69.44

Gene sequence:

>1260_bases
ATGCATCGCCTGACTGCCCCGCGCACCCCACGCGCAGCGCTGCCCGCCTTCGCCCCGTCCCTCGCGCTCGCGCTCACCCT
GACGGCCGCCACGGCGCTGCTGCCCGCGCCTGCGCATGCCCAGATCTCCGACAATGTGGTGCGCATCGGCGTGCTCGGCG
ACATGGGCGGGCAGTTCGCCGACATCGGCGGCAAGGGCTCGGTGGTGGCGGCGCAGCTCGCCGTAGACGATTTCGGCGGC
AAGGTCGCCGGCGCGCCGGTGGAGGTGATCGCCGGCGATCACCAGAACAAGCCGGACGTGGGCGGCGCCACCCTGCGCAA
ATGGTTCGATGAGGGCGGCGTGGATGCGGTAGCCGACCTGCCGGTCAGCTCGGTGGCCCTCGCCGCGCAGGAGATCGCGC
GGGAGAAGAAGAAGACCCTGCTCATCTCCGGCGCCGCCGTGTCGGACCTCACCGGCAAGGCCTGCTCGCCTTATTCCACC
CACTGGGCGGACGACACCTATGCGCTGGCCAACGCCACCGGCCGCGCGGTGACAGCGGGCGGCGGCAAGAGCTGGTTCTT
CCTCACCGTGGATTATTCCTTCGGCCATGCCATGGAGCGCGATGCCTCGGCGGCGGTGGTGGCCACCGGCGGCAAGGTGG
TGGGCAATGCGCGCCATCCGCTGGGGGCGGCGGACCTGTCCTCCTTCCTGCTGCAGGCCCAGTCCTCCAAGGCGCAAGTG
ATCGGCCTTGCCAATGTGGGCGGCGACACCAGCAATGCGGTGAAGCAGGCGGCCGAATTCGGCATCACCTCCGGAGGGCA
GAAGCTGGCGGGCTTCCTCGTCTTCCTCACGGATGTGCACGCCATCGGCCTGCCGCTGGCCAAGGGGCTCATGGTCTCCA
CCGGCTTCTACTGGGACCAGAATGCCGAGGCGCGGGCCTTCGCCAAGCGTTTCGAGGCCAAGATGGGCCGCATGCCCACC
AAGCAGCAGGCCTCGGTCTATGCCTCGGTGAAGCACTATCTGAAGGCGGTCGCCGCCGCCGGCACCGATGATGCCGCCAA
GGTGAATGCCGAGATGCGCAGCCTGCCGGTGGACTATTTCGGCCACGCCGCCTCCATCCGCCCCGACGGCCGCGTGCTCT
ACGACCTCACCCTCTATGAGGTGAAGAGCCCGGCCGAGAGCAAGGGGCCGTGGGACTATTACAAGCCGGTCACCACCCTG
CCCGCCGCCGAGGTGTTCCGCCCCGCCGGCGAGACCGGATGCCCGCTGGGCAAGTCCTGA

Upstream 100 bases:

>100_bases
GCCGCCGACGCCAATCGGCGGCCCGCACACAGGAACACTCCACAAGACTGAACCAGCGCGCCGCGCAGGAACGACGGCGC
GCGCCCACGGGAGGACCATG

Downstream 100 bases:

>100_bases
TCGACAAGTCCTGATCGGCAAATCCTCAAATCCCGGCACGGACGAAGAGGAAAACACAGCGCCGGAGCATGCTCCGGCGC
TTTTTCATGCCCGGCCTTCG

Product: putative ABC branched-chain amino transporter, periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MHRLTAPRTPRAALPAFAPSLALALTLTAATALLPAPAHAQISDNVVRIGVLGDMGGQFADIGGKGSVVAAQLAVDDFGG
KVAGAPVEVIAGDHQNKPDVGGATLRKWFDEGGVDAVADLPVSSVALAAQEIAREKKKTLLISGAAVSDLTGKACSPYST
HWADDTYALANATGRAVTAGGGKSWFFLTVDYSFGHAMERDASAAVVATGGKVVGNARHPLGAADLSSFLLQAQSSKAQV
IGLANVGGDTSNAVKQAAEFGITSGGQKLAGFLVFLTDVHAIGLPLAKGLMVSTGFYWDQNAEARAFAKRFEAKMGRMPT
KQQASVYASVKHYLKAVAAAGTDDAAKVNAEMRSLPVDYFGHAASIRPDGRVLYDLTLYEVKSPAESKGPWDYYKPVTTL
PAAEVFRPAGETGCPLGKS

Sequences:

>Translated_419_residues
MHRLTAPRTPRAALPAFAPSLALALTLTAATALLPAPAHAQISDNVVRIGVLGDMGGQFADIGGKGSVVAAQLAVDDFGG
KVAGAPVEVIAGDHQNKPDVGGATLRKWFDEGGVDAVADLPVSSVALAAQEIAREKKKTLLISGAAVSDLTGKACSPYST
HWADDTYALANATGRAVTAGGGKSWFFLTVDYSFGHAMERDASAAVVATGGKVVGNARHPLGAADLSSFLLQAQSSKAQV
IGLANVGGDTSNAVKQAAEFGITSGGQKLAGFLVFLTDVHAIGLPLAKGLMVSTGFYWDQNAEARAFAKRFEAKMGRMPT
KQQASVYASVKHYLKAVAAAGTDDAAKVNAEMRSLPVDYFGHAASIRPDGRVLYDLTLYEVKSPAESKGPWDYYKPVTTL
PAAEVFRPAGETGCPLGKS
>Mature_419_residues
MHRLTAPRTPRAALPAFAPSLALALTLTAATALLPAPAHAQISDNVVRIGVLGDMGGQFADIGGKGSVVAAQLAVDDFGG
KVAGAPVEVIAGDHQNKPDVGGATLRKWFDEGGVDAVADLPVSSVALAAQEIAREKKKTLLISGAAVSDLTGKACSPYST
HWADDTYALANATGRAVTAGGGKSWFFLTVDYSFGHAMERDASAAVVATGGKVVGNARHPLGAADLSSFLLQAQSSKAQV
IGLANVGGDTSNAVKQAAEFGITSGGQKLAGFLVFLTDVHAIGLPLAKGLMVSTGFYWDQNAEARAFAKRFEAKMGRMPT
KQQASVYASVKHYLKAVAAAGTDDAAKVNAEMRSLPVDYFGHAASIRPDGRVLYDLTLYEVKSPAESKGPWDYYKPVTTL
PAAEVFRPAGETGCPLGKS

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 43371; Mature: 43371

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLTAPRTPRAALPAFAPSLALALTLTAATALLPAPAHAQISDNVVRIGVLGDMGGQFA
CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEE
DIGGKGSVVAAQLAVDDFGGKVAGAPVEVIAGDHQNKPDVGGATLRKWFDEGGVDAVADL
CCCCCCCEEEEEEEHHHCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEECCC
PVSSVALAAQEIAREKKKTLLISGAAVSDLTGKACSPYSTHWADDTYALANATGRAVTAG
CHHHHHHHHHHHHHHHHHEEEEECCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEECC
GGKSWFFLTVDYSFGHAMERDASAAVVATGGKVVGNARHPLGAADLSSFLLQAQSSKAQV
CCCEEEEEEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHCCCCEEE
IGLANVGGDTSNAVKQAAEFGITSGGQKLAGFLVFLTDVHAIGLPLAKGLMVSTGFYWDQ
EEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEECC
NAEARAFAKRFEAKMGRMPTKQQASVYASVKHYLKAVAAAGTDDAAKVNAEMRSLPVDYF
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
GHAASIRPDGRVLYDLTLYEVKSPAESKGPWDYYKPVTTLPAAEVFRPAGETGCPLGKS
CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MHRLTAPRTPRAALPAFAPSLALALTLTAATALLPAPAHAQISDNVVRIGVLGDMGGQFA
CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEE
DIGGKGSVVAAQLAVDDFGGKVAGAPVEVIAGDHQNKPDVGGATLRKWFDEGGVDAVADL
CCCCCCCEEEEEEEHHHCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEECCC
PVSSVALAAQEIAREKKKTLLISGAAVSDLTGKACSPYSTHWADDTYALANATGRAVTAG
CHHHHHHHHHHHHHHHHHEEEEECCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEECC
GGKSWFFLTVDYSFGHAMERDASAAVVATGGKVVGNARHPLGAADLSSFLLQAQSSKAQV
CCCEEEEEEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHCCCCEEE
IGLANVGGDTSNAVKQAAEFGITSGGQKLAGFLVFLTDVHAIGLPLAKGLMVSTGFYWDQ
EEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEECC
NAEARAFAKRFEAKMGRMPTKQQASVYASVKHYLKAVAAAGTDDAAKVNAEMRSLPVDYF
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
GHAASIRPDGRVLYDLTLYEVKSPAESKGPWDYYKPVTTLPAAEVFRPAGETGCPLGKS
CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA