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The map label for this gene is ybfB [H]

Identifier: 154245244

GI number: 154245244

Start: 1493150

End: 1494457

Strand: Reverse

Name: ybfB [H]

Synonym: Xaut_1296

Alternate gene names: 154245244

Gene position: 1494457-1493150 (Counterclockwise)

Preceding gene: 154245245

Following gene: 154245241

Centisome position: 28.15

GC content: 70.72

Gene sequence:

>1308_bases
ATGAACGCCCCCGCAGATTTCCCCACGCGCCAGCCACGGCTCGCTGCCTTCCTCGCCCGCAGGGGTATCCATTATGGCTG
GGCGGTGGCCGCGGTGACATTCCTCACCATGCTGGTGACCGCGGGCGCGGTGGGAGCGCCGGGCGTGCTCATCGGGCCGC
TGCAGGCGGAATTCGGCTGGGCCACCGCCGACATCTCCTCCGCCTTCGCGGTGCGGCTCATGCTGTTCGGCCTCCTCGGC
CCGTTCGCCGCCGCCTTCATGAACCGCTTCGGCATCCGCCCGGTGGCGACCGTGGCGCTGACGCTGATCGCCGCTGGCGT
GCTCGGCTCCTTCACCATGACCAGGCTCTGGCACCTCGTGCTGCTGTGGGGCGTGGTGGTGGGGATCGGCACCGGCCTCA
CCGCCATGGTGCTGGGGGCGACCGTGGCGACGCGGTGGTTCGCCCAGCGCCGCGGCCTCGTCCTCGGACTGCTGACGGCG
AGCACGGCCACCGGCCAGCTGGTGTTCCTGCCGCTGCTCGCCCGGCTCACCGAGGTGCTGGGCTGGCGCAGCGCCCTCGG
CCTGGTGCTGGCCATGCTGCTGGTGGCGGTGGTGTGCGTGCTGCTCTTCATGCGCGACCGGCCCTCCGACGTGGGCCTCC
TGCCCTATGGCGCCAGCGTGCCGCCTCCGGCACCGGTGCTGCCCACGACGTTCGGCGCCATGCTGGCCTCGCCCCTGGTG
GCGTTGAGGGATGCGGCGCGCACGCCCACCTTCTGGGTGCTGTTTGCCACCTTCTTCATCTGCGGCGCCTCCACCAACGG
GCTGGTGCAGACCCATTTCGTGTCCCTGTGCGGCGACTACGGCATGGCGGCGGTGACGGCGGCGGGCATGCTGGCGATGA
TCGGCATCTTCGATTTCATCGGCACGGTGGGCTCGGGCTGGCTGTCCGACCGCTTCGACAGCCGCTGGCTGCTGTTCTGG
TATTACGGGCTGCGCGGCCTCTCGCTGCTGTACCTGCCCTTCACCGATTTCAGCTTCTACGGACTGTCCCTGTTCGCGGT
CTTCTACGGCCTCGACTGGGTGGCGACGGTGCCGCCCACGGTGAAGCTCACCGCCGACCGCTTCGGCGAGCGCGCCAACC
TCGTGTTCGGCTGGATCTTCGCGGGCCACCAGCTCGGCGCGGCCGCGGCGGCCTATGGCGCCGGCTTCAGCCGCACCTTC
TACCAGACCTATCTGCCCGCCTTCTTCGTCGCCGGCGTGCTCTGCATCATTGCGGCGGGAGCCATCGTCGCGGTGCGCGA
GCGGCGCCCCGCGCCGACCGCTGCGTGA

Upstream 100 bases:

>100_bases
GCGCCTGGGCGCCGACAAGATCGAAGCCCTGCGCGCCATTGCGAATGCCGTGTGATTTTTGCGGACTAAAACGGGCATAT
GCCCGTAGATTGGATATCGG

Downstream 100 bases:

>100_bases
AGGGCCGCGCGGGCGCTCAGTTGAGGCCGGCTCCCCGCATGGCCTCGGCGGCGCGGCGGATCACCTGGGGCGGCTGGCCG
AAGGTGCGTACGAAGGCCCG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MNAPADFPTRQPRLAAFLARRGIHYGWAVAAVTFLTMLVTAGAVGAPGVLIGPLQAEFGWATADISSAFAVRLMLFGLLG
PFAAAFMNRFGIRPVATVALTLIAAGVLGSFTMTRLWHLVLLWGVVVGIGTGLTAMVLGATVATRWFAQRRGLVLGLLTA
STATGQLVFLPLLARLTEVLGWRSALGLVLAMLLVAVVCVLLFMRDRPSDVGLLPYGASVPPPAPVLPTTFGAMLASPLV
ALRDAARTPTFWVLFATFFICGASTNGLVQTHFVSLCGDYGMAAVTAAGMLAMIGIFDFIGTVGSGWLSDRFDSRWLLFW
YYGLRGLSLLYLPFTDFSFYGLSLFAVFYGLDWVATVPPTVKLTADRFGERANLVFGWIFAGHQLGAAAAAYGAGFSRTF
YQTYLPAFFVAGVLCIIAAGAIVAVRERRPAPTAA

Sequences:

>Translated_435_residues
MNAPADFPTRQPRLAAFLARRGIHYGWAVAAVTFLTMLVTAGAVGAPGVLIGPLQAEFGWATADISSAFAVRLMLFGLLG
PFAAAFMNRFGIRPVATVALTLIAAGVLGSFTMTRLWHLVLLWGVVVGIGTGLTAMVLGATVATRWFAQRRGLVLGLLTA
STATGQLVFLPLLARLTEVLGWRSALGLVLAMLLVAVVCVLLFMRDRPSDVGLLPYGASVPPPAPVLPTTFGAMLASPLV
ALRDAARTPTFWVLFATFFICGASTNGLVQTHFVSLCGDYGMAAVTAAGMLAMIGIFDFIGTVGSGWLSDRFDSRWLLFW
YYGLRGLSLLYLPFTDFSFYGLSLFAVFYGLDWVATVPPTVKLTADRFGERANLVFGWIFAGHQLGAAAAAYGAGFSRTF
YQTYLPAFFVAGVLCIIAAGAIVAVRERRPAPTAA
>Mature_435_residues
MNAPADFPTRQPRLAAFLARRGIHYGWAVAAVTFLTMLVTAGAVGAPGVLIGPLQAEFGWATADISSAFAVRLMLFGLLG
PFAAAFMNRFGIRPVATVALTLIAAGVLGSFTMTRLWHLVLLWGVVVGIGTGLTAMVLGATVATRWFAQRRGLVLGLLTA
STATGQLVFLPLLARLTEVLGWRSALGLVLAMLLVAVVCVLLFMRDRPSDVGLLPYGASVPPPAPVLPTTFGAMLASPLV
ALRDAARTPTFWVLFATFFICGASTNGLVQTHFVSLCGDYGMAAVTAAGMLAMIGIFDFIGTVGSGWLSDRFDSRWLLFW
YYGLRGLSLLYLPFTDFSFYGLSLFAVFYGLDWVATVPPTVKLTADRFGERANLVFGWIFAGHQLGAAAAAYGAGFSRTF
YQTYLPAFFVAGVLCIIAAGAIVAVRERRPAPTAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI34916028, Length=191, Percent_Identity=29.8429319371728, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17550316, Length=194, Percent_Identity=30.4123711340206, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17557434, Length=146, Percent_Identity=32.1917808219178, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32567122, Length=146, Percent_Identity=32.1917808219178, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652823, Length=251, Percent_Identity=27.0916334661355, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46276; Mature: 46276

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPADFPTRQPRLAAFLARRGIHYGWAVAAVTFLTMLVTAGAVGAPGVLIGPLQAEFGW
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHCCCC
ATADISSAFAVRLMLFGLLGPFAAAFMNRFGIRPVATVALTLIAAGVLGSFTMTRLWHLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWGVVVGIGTGLTAMVLGATVATRWFAQRRGLVLGLLTASTATGQLVFLPLLARLTEVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
GWRSALGLVLAMLLVAVVCVLLFMRDRPSDVGLLPYGASVPPPAPVLPTTFGAMLASPLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
ALRDAARTPTFWVLFATFFICGASTNGLVQTHFVSLCGDYGMAAVTAAGMLAMIGIFDFI
HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GTVGSGWLSDRFDSRWLLFWYYGLRGLSLLYLPFTDFSFYGLSLFAVFYGLDWVATVPPT
HHHCCCHHHHCCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCHHCCCCCC
VKLTADRFGERANLVFGWIFAGHQLGAAAAAYGAGFSRTFYQTYLPAFFVAGVLCIIAAG
EEEEHHHCCCCCCCEEEHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIVAVRERRPAPTAA
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MNAPADFPTRQPRLAAFLARRGIHYGWAVAAVTFLTMLVTAGAVGAPGVLIGPLQAEFGW
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHCCCC
ATADISSAFAVRLMLFGLLGPFAAAFMNRFGIRPVATVALTLIAAGVLGSFTMTRLWHLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWGVVVGIGTGLTAMVLGATVATRWFAQRRGLVLGLLTASTATGQLVFLPLLARLTEVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
GWRSALGLVLAMLLVAVVCVLLFMRDRPSDVGLLPYGASVPPPAPVLPTTFGAMLASPLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
ALRDAARTPTFWVLFATFFICGASTNGLVQTHFVSLCGDYGMAAVTAAGMLAMIGIFDFI
HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GTVGSGWLSDRFDSRWLLFWYYGLRGLSLLYLPFTDFSFYGLSLFAVFYGLDWVATVPPT
HHHCCCHHHHCCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCHHCCCCCC
VKLTADRFGERANLVFGWIFAGHQLGAAAAAYGAGFSRTFYQTYLPAFFVAGVLCIIAAG
EEEEHHHCCCCCCCEEEHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIVAVRERRPAPTAA
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]