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The map label for this gene is dapA1 [H]

Identifier: 154244971

GI number: 154244971

Start: 1172822

End: 1173754

Strand: Reverse

Name: dapA1 [H]

Synonym: Xaut_1021

Alternate gene names: 154244971

Gene position: 1173754-1172822 (Counterclockwise)

Preceding gene: 154244972

Following gene: 154244970

Centisome position: 22.11

GC content: 69.35

Gene sequence:

>933_bases
ATGCCCACGTTTCCTGCCGCGCGCCCGTTCAAGGGCGTGTTCCCGGTGGCGCCCACCGTGTTCGACGCCGCCGGCGCGCT
TGATCTGGACGGCCAGAAACGCGCCATCGACTGCATGATCGATGCTGGCTCCCACGGCATCTGCATCCTCGCCAATTTCT
CCGAGCAGTTCGTGCTCACCGACGACGAGCGCGACCGCGTCATGGTCACGGTGCTGGAGCATGTGGCGGGCCGGGTGCCG
GTGATCGTCACCACCACCCATTTCTCCACCGCCGTCTGTGCCGAGCGCTCGCGCCGGGCGCAGGAGCGGGGCGCGGCCAT
GGTGATGATCATGCCGCCCTACCACGGCGCCACCTTCCGGGTGCCGGAAGCCTCCATCTACGACTTCTATCGCGGCGTCT
CCGACGCCATCTCCATTCCCATCATGGTGCAGGACGCGCCGGTGGCGGGCACGCCTCTGTCGGTGCCGTTCCTCGCCCGC
ATGGCGAAGGAGATCGGCAACCTCGCCTATTTCAAGATCGAGGTGCCGCAGGCTGCAGCCAAGCTGCGCGCGCTGATCGA
GGCCGGGGGCGATGCCATCGAAGGGCCGTGGGACGGGGAAGAGGCCATCACCCTGATGGCCGACCTCGACGCCGGCGCCA
CCGGCGCCATGACGGGCGGCGCCTATGCGGACGGCATCCGCCAGGTGACCGATCCCTACTTCGCCGGCGACCGCGAAGCC
GCCATGGACGCCTACCAGCGCTGGCTGCCGCTGATCAATTACGAGAACCGCCAGTGCGGCCTCGCCGCCTGCAAGGCGCT
GATGAAGGAAGGCGGCGTCATCGCCCACGAGACCGTGCGCGCGCCCCTGCCGGCCATGCACCCCGCCACCCGCGCCGGCC
TGATCGAGATCGCCCGCCGGCTCGACCCGCTGGTGCTGCGCTGGGGGAAATGA

Upstream 100 bases:

>100_bases
CATCGACCACGTGCTGCAGGCCGACCGCGGCGCGGATTTCGATTTTCTCGTCGGCCGCACCGGATCGCCGGTGCCGCGCG
ACAATCACTGAAGGTGACCC

Downstream 100 bases:

>100_bases
TCATCCGCTGATCCTCGGCGTCATCTTATTTGCCGTCGTCCTCGGTCTTCGACCGAGGCCAAGTGTCCGCTTTTCAACTC
GGGGGCTCCCGAGTTGAAGA

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS 1 [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPTFPAARPFKGVFPVAPTVFDAAGALDLDGQKRAIDCMIDAGSHGICILANFSEQFVLTDDERDRVMVTVLEHVAGRVP
VIVTTTHFSTAVCAERSRRAQERGAAMVMIMPPYHGATFRVPEASIYDFYRGVSDAISIPIMVQDAPVAGTPLSVPFLAR
MAKEIGNLAYFKIEVPQAAAKLRALIEAGGDAIEGPWDGEEAITLMADLDAGATGAMTGGAYADGIRQVTDPYFAGDREA
AMDAYQRWLPLINYENRQCGLAACKALMKEGGVIAHETVRAPLPAMHPATRAGLIEIARRLDPLVLRWGK

Sequences:

>Translated_310_residues
MPTFPAARPFKGVFPVAPTVFDAAGALDLDGQKRAIDCMIDAGSHGICILANFSEQFVLTDDERDRVMVTVLEHVAGRVP
VIVTTTHFSTAVCAERSRRAQERGAAMVMIMPPYHGATFRVPEASIYDFYRGVSDAISIPIMVQDAPVAGTPLSVPFLAR
MAKEIGNLAYFKIEVPQAAAKLRALIEAGGDAIEGPWDGEEAITLMADLDAGATGAMTGGAYADGIRQVTDPYFAGDREA
AMDAYQRWLPLINYENRQCGLAACKALMKEGGVIAHETVRAPLPAMHPATRAGLIEIARRLDPLVLRWGK
>Mature_309_residues
PTFPAARPFKGVFPVAPTVFDAAGALDLDGQKRAIDCMIDAGSHGICILANFSEQFVLTDDERDRVMVTVLEHVAGRVPV
IVTTTHFSTAVCAERSRRAQERGAAMVMIMPPYHGATFRVPEASIYDFYRGVSDAISIPIMVQDAPVAGTPLSVPFLARM
AKEIGNLAYFKIEVPQAAAKLRALIEAGGDAIEGPWDGEEAITLMADLDAGATGAMTGGAYADGIRQVTDPYFAGDREAA
MDAYQRWLPLINYENRQCGLAACKALMKEGGVIAHETVRAPLPAMHPATRAGLIEIARRLDPLVLRWGK

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=185, Percent_Identity=29.1891891891892, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87082415, Length=182, Percent_Identity=23.0769230769231, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33372; Mature: 33241

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFPAARPFKGVFPVAPTVFDAAGALDLDGQKRAIDCMIDAGSHGICILANFSEQFVLT
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEE
DDERDRVMVTVLEHVAGRVPVIVTTTHFSTAVCAERSRRAQERGAAMVMIMPPYHGATFR
CCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEE
VPEASIYDFYRGVSDAISIPIMVQDAPVAGTPLSVPFLARMAKEIGNLAYFKIEVPQAAA
CCCHHHHHHHHCHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCHHHH
KLRALIEAGGDAIEGPWDGEEAITLMADLDAGATGAMTGGAYADGIRQVTDPYFAGDREA
HHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH
AMDAYQRWLPLINYENRQCGLAACKALMKEGGVIAHETVRAPLPAMHPATRAGLIEIARR
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHH
LDPLVLRWGK
CCHHEEECCC
>Mature Secondary Structure 
PTFPAARPFKGVFPVAPTVFDAAGALDLDGQKRAIDCMIDAGSHGICILANFSEQFVLT
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEE
DDERDRVMVTVLEHVAGRVPVIVTTTHFSTAVCAERSRRAQERGAAMVMIMPPYHGATFR
CCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEE
VPEASIYDFYRGVSDAISIPIMVQDAPVAGTPLSVPFLARMAKEIGNLAYFKIEVPQAAA
CCCHHHHHHHHCHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCHHHH
KLRALIEAGGDAIEGPWDGEEAITLMADLDAGATGAMTGGAYADGIRQVTDPYFAGDREA
HHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH
AMDAYQRWLPLINYENRQCGLAACKALMKEGGVIAHETVRAPLPAMHPATRAGLIEIARR
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHH
LDPLVLRWGK
CCHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]