Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154244554

Identifier: 154244554

GI number: 154244554

Start: 673279

End: 674013

Strand: Direct

Name: 154244554

Synonym: Xaut_0599

Alternate gene names: NA

Gene position: 673279-674013 (Clockwise)

Preceding gene: 154244553

Following gene: 154244555

Centisome position: 12.68

GC content: 66.67

Gene sequence:

>735_bases
ATGATCCGCCGTTCATTGCGGGCGGTGCTCGTCGCCGCGCCGCTTCTTTTCTGCCCGTTCGCGCCGGCCGTGGCGCAGTA
CGTGGTCTACGACCCCTCCAACTATGCCCAGAACGTCCTTCAAGCTGCTCGGGCGCTACAGCAGGTCACCAACCAGATCA
CCTCGCTTCAGAACGAAGCGCAGATGCTGATCAATCAGACCCGCAATCTTGCGAACCTGCCTTATTCCTCTATCAGCGCA
TTCCAGCAGGCGGCCCAGCGCACCCAGCAATTGCTCGGTCAGGCCCAGAAGATCGCCTATGACGTCACCGCCATCGACCG
GGCGTTTCAGGGCCAGTATGGCTCGGTCTCCCTGAGCAGTTCGGATGCCGCCCTTGTCACCCAGGCGAAGAGCCGCTGGG
AGACCACGGTCGCCGGCCTCCAGGATGCGCTGCGGGTGCAGGCGGGCGTCGTCGGCAATCTCGACACCGGCCGCTCGCAG
GCCTCGACACTGGTCGGCCAGAGCCAGGCGGCGAGCGGCGCGCTGCAGGCCATGCAGGCGGGCAACCAGCTTCAGGCGCT
CCAGGCCCAGCAGCTCTCCGACCTCACCGCCGTGATCACGGCGAACGGCCGCGCACAGGCCCTGTCCGAAGCTGAGCGGG
CGACGGCGGTGTCGGAAGGGCAGGAGCGCTACCGGCGCTTCTCCACCCGGTCGAGCTACCAGCCTGCCGCCGTCACCATG
TTCCACGGCAAGTGA

Upstream 100 bases:

>100_bases
AGCATGGGCGCGACGGCTTCTTCGCCCCCTGGCTGCGGCATCGCGGCCTCGGCTGGGCCGCCGATCTCATCCTCACCCTC
GACAATCTGGAGCCACGCTC

Downstream 100 bases:

>100_bases
GGCGTGGCCGTGGACCGGGACACCACGCTTCGAACCCTCCTCGTCGCCGGCCTGGTGGGCACGGTGATCGCAGCCCTTGC
CGTCTCCTCAGGCCGGGAAA

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEAQMLINQTRNLANLPYSSISA
FQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSSSDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQ
ASTLVGQSQAASGALQAMQAGNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM
FHGK

Sequences:

>Translated_244_residues
MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEAQMLINQTRNLANLPYSSISA
FQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSSSDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQ
ASTLVGQSQAASGALQAMQAGNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM
FHGK
>Mature_244_residues
MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEAQMLINQTRNLANLPYSSISA
FQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSSSDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQ
ASTLVGQSQAASGALQAMQAGNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM
FHGK

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26154; Mature: 26154

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEA
CCHHHHHHHHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMLINQTRNLANLPYSSISAFQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
SDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQASTLVGQSQAASGALQAMQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM
CCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
FHGK
ECCC
>Mature Secondary Structure
MIRRSLRAVLVAAPLLFCPFAPAVAQYVVYDPSNYAQNVLQAARALQQVTNQITSLQNEA
CCHHHHHHHHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMLINQTRNLANLPYSSISAFQQAAQRTQQLLGQAQKIAYDVTAIDRAFQGQYGSVSLSS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
SDAALVTQAKSRWETTVAGLQDALRVQAGVVGNLDTGRSQASTLVGQSQAASGALQAMQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GNQLQALQAQQLSDLTAVITANGRAQALSEAERATAVSEGQERYRRFSTRSSYQPAAVTM
CCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
FHGK
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA