| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is pckA [H]
Identifier: 153951612
GI number: 153951612
Start: 782774
End: 784348
Strand: Direct
Name: pckA [H]
Synonym: JJD26997_0882
Alternate gene names: 153951612
Gene position: 782774-784348 (Clockwise)
Preceding gene: 153952195
Following gene: 153951734
Centisome position: 42.42
GC content: 33.02
Gene sequence:
>1575_bases ATGAAAAAATTTGATAATTTAGGTTTGGATAATATAAAGGAAATTTTTCATAATTTAAGTTATGATGAATTAAATGCTCA TGAAAAAGTAAACAATGAAGGTTTAAGTACGGATAATGATACTTTTTGTGTAGATACAGGCATTTTTACAGGTAGAAGTC CTAAAGATAAATATTTTGTAAAACAAGATCCATCTAGCAAATATATAGCTTGGGGAAAGGTAAATCAACCTATTACAAAA GAATTATTTGATAAGCTTTTGACTAAAGCAAAACAAGAATTAAGTGGAAAGAAAATTTATGTTCAAGATGCTTTTTGCGG TGCTTCTTTACAAAGTCGTAAAGCGGTAAGATTTGTTACTGAAATTGCATGGCAAGCGCATTTTGTTAAGAATATGTTTA TTCGCCCAAGTCAAGAGGAACTTGAGAATTTCAAAGCAGATTTTATCGTTTATAATGCTTGCAAATGTATCAATGAAGAT TATAAACAAGATGGTTTAAATTCAGAAGTTTTTGTAATCTTTAATGTTGAAGAAAATATAGCAGTTATTGGTGGGACTTG GTATGGTGGAGAAATGAAAAAAGGTATTTTTTCTATGATGAATTATTGGTTGCCGCTAGAAAATAAACTTTCTATGCATT GCAGTGCAAATGTCGGAGAAAAGGGTGATGTAGCACTTTTCTTTGGACTTAGTGGCACTGGAAAAACTACGCTTTCAACA GATCCAAAAAGAAAACTTATAGGTGATGATGAGCATGGCTGGGATGATGAAGGTGTATTTAATTTTGAGGGCGGTTGTTA CGCAAAAACAATTAATCTTGATCCTGAGCACGAACCTGAAATTTATGGTGCGATTAAAAGAAATGCTCTCTTAGAAAATG TAGTTTTAAGAGCCGATAAGAGTGTTGATTATGCTGATGCTTCAAAAACAGAAAATACAAGAGTTTCTTATCCTATAGAG CATATTGAAAATCATGAGCCTAGCTTAAAAGCAGGTCATCCAAAAAATATTATATTTTTAAGTGCAGATGCTTTTGGAAT TTTACCTCCGGTGAGCAAACTAAGCAAAGAGCAGGCTATGTATTATTTTTTAAGCGGTTATACAGCAAAAGTAGCTGGAA CTGAGCGTGGTATAACAGAGCCTCAAGCAACTTTTTCAGCTTGCTTTGGGGAGCCTTTTATGCCTTTACATCCAACGGTT TATGCGAGATTACTTGGTGAAAAGATTGAAAAATATGAAGTTAATGTTTATCTTGTTAATACAGGTTGGAGTGGTGGAAG CTACGGTGTGGGTAAAAGAATGAGCATTAAGGCTACTAGGGCTTGCATTAATGCTATTTTAGATGGAAGCATTACAAAAT GTGAATTTGAAAATTTTGAAGTGTTTGATTTGGCTATTCCAAAAGCTTTAGAAGGTGTAGAAAGCACGCTTTTAAATCCT ATAAATACTTGGTCGGATAAAAATGCCTATACCGAAACAAGAGATAAATTAGCCCATATGTTTGTGCAAAATTTTAAACG CTATGAAGATGTCAAAGAAGGCATTGAATTTAGCAAATTTGGACCAAAAATTTAA
Upstream 100 bases:
>100_bases CCCAAAAGATGGAATTATTTCAGAGCTTTGTATTAAAATAGGCGATACTGTTAACGAAGGCGAAGTATTAGCTATTTACA AGAATTAAAGTGAGGGAAAA
Downstream 100 bases:
>100_bases GGCGTTTAAATGAAAAATGAAATGTGGTCAGGACGCTTTAGCGGTGCAAGTGATGAGCTTCTAAAGGAATTTAATGCGAG TTTGAATGTAGATAAAACTT
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MKKFDNLGLDNIKEIFHNLSYDELNAHEKVNNEGLSTDNDTFCVDTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITK ELFDKLLTKAKQELSGKKIYVQDAFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKGDVALFFGLSGTGKTTLST DPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIE HIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTV YARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNP INTWSDKNAYTETRDKLAHMFVQNFKRYEDVKEGIEFSKFGPKI
Sequences:
>Translated_524_residues MKKFDNLGLDNIKEIFHNLSYDELNAHEKVNNEGLSTDNDTFCVDTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITK ELFDKLLTKAKQELSGKKIYVQDAFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKGDVALFFGLSGTGKTTLST DPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIE HIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTV YARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNP INTWSDKNAYTETRDKLAHMFVQNFKRYEDVKEGIEFSKFGPKI >Mature_524_residues MKKFDNLGLDNIKEIFHNLSYDELNAHEKVNNEGLSTDNDTFCVDTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITK ELFDKLLTKAKQELSGKKIYVQDAFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKGDVALFFGLSGTGKTTLST DPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIE HIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTV YARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNP INTWSDKNAYTETRDKLAHMFVQNFKRYEDVKEGIEFSKFGPKI
Specific function: Rate-limiting gluconeogenic enzyme. [C]
COG id: COG1866
COG function: function code C; Phosphoenolpyruvate carboxykinase (ATP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [ATP] family [H]
Homologues:
Organism=Escherichia coli, GI1789807, Length=535, Percent_Identity=56.8224299065421, Blast_Score=624, Evalue=1e-180, Organism=Saccharomyces cerevisiae, GI6322950, Length=487, Percent_Identity=48.870636550308, Blast_Score=454, Evalue=1e-128,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001272 - InterPro: IPR013035 - InterPro: IPR008210 - InterPro: IPR015994 [H]
Pfam domain/function: PF01293 PEPCK_ATP [H]
EC number: =4.1.1.49 [H]
Molecular weight: Translated: 58988; Mature: 58988
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00532 PEPCK_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFDNLGLDNIKEIFHNLSYDELNAHEKVNNEGLSTDNDTFCVDTGIFTGRSPKDKYFV CCCCCCCCHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCCCCEEEECCEECCCCCCCCEEE KQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQDAFCGASLQSRKAVRFVT EECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH EIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINEDYKQDGLNSEVFVIFNVEENI HHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEHHHHHHCHHHHHCCCCCCEEEEEEECCCE AVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKGDVALFFGLSGTGKTTLST EEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCC DPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVLRADK CCCHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC SVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAM CCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHE YYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKYEVNVYLVN EEEECCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEE TGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNP CCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHCCC INTWSDKNAYTETRDKLAHMFVQNFKRYEDVKEGIEFSKFGPKI HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKKFDNLGLDNIKEIFHNLSYDELNAHEKVNNEGLSTDNDTFCVDTGIFTGRSPKDKYFV CCCCCCCCHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCCCCEEEECCEECCCCCCCCEEE KQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQDAFCGASLQSRKAVRFVT EECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH EIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINEDYKQDGLNSEVFVIFNVEENI HHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEHHHHHHCHHHHHCCCCCCEEEEEEECCCE AVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKGDVALFFGLSGTGKTTLST EEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCC DPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEIYGAIKRNALLENVVLRADK CCCHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC SVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAM CCCCCCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHE YYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKYEVNVYLVN EEEECCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEE TGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNP CCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHCCC INTWSDKNAYTETRDKLAHMFVQNFKRYEDVKEGIEFSKFGPKI HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA