Click here to switch to the map view.

The map label for this gene is mtnD

Identifier: 153950848

GI number: 153950848

Start: 3585008

End: 3585550

Strand: Reverse

Name: mtnD

Synonym: YpsIP31758_3180

Alternate gene names: 153950848

Gene position: 3585550-3585008 (Counterclockwise)

Preceding gene: 153949004

Following gene: 153947416

Centisome position: 75.91

GC content: 50.28

Gene sequence:

>543_bases
ATGAGCGGATTAACGATTTTTAGCGACCAGCAGCCAGAAAAACCGTTGTGGCAGAGCCATAATGCTGAAGAAATTCAACA
GCAGTTGACGGCTATCGGGGTGCGCTTTGAGCGCTGGCAGGCAGATTGTGAACTGGGTGAGAACCCACAGCCAGAGGCCG
TTATTGCGGCTTATCAGCATGAGATTGATCGGCTGGTGGCAGAAAATGGCTATAAGAGCTGGGATGTGATCAGTATGCGC
CCCGATAATCCTCAACGTGAAGCACTGCGAGAGAAATTTTTATCTGAGCATACCCACGGCGAAGATGAAGTGCGTTTTTT
TGTTGAAGGTAGCGGGCTGTTCTGTTTGCATCTAAACGAGAAGGTTTACCAGATTCTGTGCGAAAAAAATGATCTGTTAT
CCGTCCCGGCGGATATCCCTCATTGGTTCGATATGGGGTCGGCACCCAATTTCACGGCTATCCGCGTGTTCGATAACCCG
GAAGGCTGGATAGCACGTTCTACCGGCGATAATATTGCCGACGGCTATCCTCGCCTCGCCTAA

Upstream 100 bases:

>100_bases
GATTATTTTAAGTCTGTTTACCGAATGATTATCTTAAGTTCGTTTACAGAATAATTGTTCCAGGTCAGTTTACCGCATGA
TTGTTTAGGGGAGTTACCGT

Downstream 100 bases:

>100_bases
ACTAAGAAATATTAAGAAATATAAAGTATCGGGTATTGATTGCTAGCGGTGAGGCTGGAAAAAGCCTGCCGCGACCTGTT
CAGGTGTGATCACTCCGCTA

Product: ARD/ARD' family dioxygenase

Products: NA

Alternate protein names: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSGLTIFSDQQPEKPLWQSHNAEEIQQQLTAIGVRFERWQADCELGENPQPEAVIAAYQHEIDRLVAENGYKSWDVISMR
PDNPQREALREKFLSEHTHGEDEVRFFVEGSGLFCLHLNEKVYQILCEKNDLLSVPADIPHWFDMGSAPNFTAIRVFDNP
EGWIARSTGDNIADGYPRLA

Sequences:

>Translated_180_residues
MSGLTIFSDQQPEKPLWQSHNAEEIQQQLTAIGVRFERWQADCELGENPQPEAVIAAYQHEIDRLVAENGYKSWDVISMR
PDNPQREALREKFLSEHTHGEDEVRFFVEGSGLFCLHLNEKVYQILCEKNDLLSVPADIPHWFDMGSAPNFTAIRVFDNP
EGWIARSTGDNIADGYPRLA
>Mature_179_residues
SGLTIFSDQQPEKPLWQSHNAEEIQQQLTAIGVRFERWQADCELGENPQPEAVIAAYQHEIDRLVAENGYKSWDVISMRP
DNPQREALREKFLSEHTHGEDEVRFFVEGSGLFCLHLNEKVYQILCEKNDLLSVPADIPHWFDMGSAPNFTAIRVFDNPE
GWIARSTGDNIADGYPRLA

Specific function: Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- me

COG id: COG1791

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acireductone dioxygenase (ARD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MTND_YERP3 (A7FLL2)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001402140.1
- ProteinModelPortal:   A7FLL2
- STRING:   A7FLL2
- GeneID:   5386705
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_3180
- eggNOG:   COG1791
- HOGENOM:   HBG660685
- OMA:   CEKNDLI
- ProtClustDB:   CLSK928049
- BioCyc:   YPSE349747:YPSIP31758_3180-MONOMER
- HAMAP:   MF_01682
- InterPro:   IPR004313
- InterPro:   IPR011051
- InterPro:   IPR014710
- Gene3D:   G3DSA:2.60.120.10
- PANTHER:   PTHR23418

Pfam domain/function: PF03079 ARD; SSF51182 RmlC_like_cupin

EC number: =1.13.11.54; =1.13.11.53

Molecular weight: Translated: 20585; Mature: 20454

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLTIFSDQQPEKPLWQSHNAEEIQQQLTAIGVRFERWQADCELGENPQPEAVIAAYQH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
EIDRLVAENGYKSWDVISMRPDNPQREALREKFLSEHTHGEDEVRFFVEGSGLFCLHLNE
HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECH
KVYQILCEKNDLLSVPADIPHWFDMGSAPNFTAIRVFDNPEGWIARSTGDNIADGYPRLA
HHHHHHHCCCCEEECCCCCCHHHCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SGLTIFSDQQPEKPLWQSHNAEEIQQQLTAIGVRFERWQADCELGENPQPEAVIAAYQH
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
EIDRLVAENGYKSWDVISMRPDNPQREALREKFLSEHTHGEDEVRFFVEGSGLFCLHLNE
HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECH
KVYQILCEKNDLLSVPADIPHWFDMGSAPNFTAIRVFDNPEGWIARSTGDNIADGYPRLA
HHHHHHHCCCCEEECCCCCCHHHCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA