| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153950839
Identifier: 153950839
GI number: 153950839
Start: 2534882
End: 2535538
Strand: Reverse
Name: 153950839
Synonym: YpsIP31758_2221
Alternate gene names: NA
Gene position: 2535538-2534882 (Counterclockwise)
Preceding gene: 153947429
Following gene: 153949327
Centisome position: 53.68
GC content: 53.42
Gene sequence:
>657_bases ATGGCTATTGCGCAGAGTGACTTCACCCTGTGGCGCGACAAGGCATACGAAGGGCAAATTTCTACTACTGATATTTGCGA AGTGATATCCCGCCGCGTTGAAACAGAAATGGTGCCATTTGGTCGGGCGGTGATCCGGGGGGCAGGTATTCGTTCTTGCG CCCCGGTGACACCGACCACAATGGCAGCACAGATCATCGGGTTTACCGTCCGTTCAATGGCGGAATTCAGTAATAGCGTG CCAACGAATCCGCCGGATTATGACGTGGGTTATGGTGTGGATCATGTCGCGTCTTTACTGCGGAAAGGGCCGATGTTTGT CCTGTGCGTTAATGGGGCTAATGCGGGTGATGCGGTCACTGTCATTACTGCCAGAGGGGATAATCAAGGTCGCCTGACTG CTGGGGGCATCGGTGTGAAGTTGGATTTTGTTTGCTGGGTAGATGATGTGGTAGCAGGCGAAATTGGCGAGGTCCGTGTT GACGGTATTTTTGCGTCAACCACGGCATCTGGTAGCGGTGCATATTGCCAGGAGGCCATCGAGGCCGGTATCCAACCCGG CAATGCTGACGCAACCATTGCCGCCAAGGGATCCGCAACGCCACTGATTAACCACGGTATGTTAAAGGGCGTAATTACTC ACATTGTGGAGGATTAA
Upstream 100 bases:
>100_bases ACATGACGAAAATCAAAATGGGTGATGCTCAGTCGGTCCGTAACAGTGTTCGCCAGACCTGGCTGGACAAACGTTATGGC AAACAACCGGAGGATAAATA
Downstream 100 bases:
>100_bases TCATGTTCGGTAATGGTCTGGATATGCATGGGCATATTGATGCCACCTTTAATTCGCCTATTGAGGGTGGCATCCGGTTG ATTCGACCGACTGCCGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAIAQSDFTLWRDKAYEGQISTTDICEVISRRVETEMVPFGRAVIRGAGIRSCAPVTPTTMAAQIIGFTVRSMAEFSNSV PTNPPDYDVGYGVDHVASLLRKGPMFVLCVNGANAGDAVTVITARGDNQGRLTAGGIGVKLDFVCWVDDVVAGEIGEVRV DGIFASTTASGSGAYCQEAIEAGIQPGNADATIAAKGSATPLINHGMLKGVITHIVED
Sequences:
>Translated_218_residues MAIAQSDFTLWRDKAYEGQISTTDICEVISRRVETEMVPFGRAVIRGAGIRSCAPVTPTTMAAQIIGFTVRSMAEFSNSV PTNPPDYDVGYGVDHVASLLRKGPMFVLCVNGANAGDAVTVITARGDNQGRLTAGGIGVKLDFVCWVDDVVAGEIGEVRV DGIFASTTASGSGAYCQEAIEAGIQPGNADATIAAKGSATPLINHGMLKGVITHIVED >Mature_217_residues AIAQSDFTLWRDKAYEGQISTTDICEVISRRVETEMVPFGRAVIRGAGIRSCAPVTPTTMAAQIIGFTVRSMAEFSNSVP TNPPDYDVGYGVDHVASLLRKGPMFVLCVNGANAGDAVTVITARGDNQGRLTAGGIGVKLDFVCWVDDVVAGEIGEVRVD GIFASTTASGSGAYCQEAIEAGIQPGNADATIAAKGSATPLINHGMLKGVITHIVED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22751; Mature: 22620
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAQSDFTLWRDKAYEGQISTTDICEVISRRVETEMVPFGRAVIRGAGIRSCAPVTPTT CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHH MAAQIIGFTVRSMAEFSNSVPTNPPDYDVGYGVDHVASLLRKGPMFVLCVNGANAGDAVT HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEE VITARGDNQGRLTAGGIGVKLDFVCWVDDVVAGEIGEVRVDGIFASTTASGSGAYCQEAI EEEECCCCCCEEEECCCEEEEEEEEEEHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHH EAGIQPGNADATIAAKGSATPLINHGMLKGVITHIVED HCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AIAQSDFTLWRDKAYEGQISTTDICEVISRRVETEMVPFGRAVIRGAGIRSCAPVTPTT CCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHH MAAQIIGFTVRSMAEFSNSVPTNPPDYDVGYGVDHVASLLRKGPMFVLCVNGANAGDAVT HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEE VITARGDNQGRLTAGGIGVKLDFVCWVDDVVAGEIGEVRVDGIFASTTASGSGAYCQEAI EEEECCCCCCEEEECCCEEEEEEEEEEHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHH EAGIQPGNADATIAAKGSATPLINHGMLKGVITHIVED HCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA