| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947429
Identifier: 153947429
GI number: 153947429
Start: 2535538
End: 2536737
Strand: Reverse
Name: 153947429
Synonym: YpsIP31758_2222
Alternate gene names: NA
Gene position: 2536737-2535538 (Counterclockwise)
Preceding gene: 153950049
Following gene: 153950839
Centisome position: 53.71
GC content: 48.33
Gene sequence:
>1200_bases ATGCGGATCACGGTACGTGACCGTGTGTCCTTTCCGATTAATTCCCAACGAGAAATCACTGCTGAGGGCTATTTAAAAGT CCCCGGGCGGGTTGCCCGCGTCGGTGTACAGCAGTATCTCGCCTCTGAACTGGGATTAACGGATCGGCCACCCGGTCAAA TTGTGAATGTCTACCGTCCTCAAGAAGAAGTTTTTTCCCCTGCGAGTCTGGCCAGTTACGACAATGCAGATATCACGATT GATCACCCTGATGATCTGGTAAATGCCCAAACGTTCAGACAGGTGACGGTGGGGCACGTCATCTCTCCGGGCCGACAGGA TGTTGAGGATGCTGACTATGTGGTTGTCGATCTTCTTATCAAAGATCAATACGCCATTGATGAAATCAATCAAGAGAAAG AGGAGCTATCAGCCGGTTATACCTCTGAATATCAACATGCACCGGGTATCGCACCCTGTGGTACTGCTTACGAATTTATT CAACGCACCATCACCATTAACCATATCGCGCTGTGTGATCAGGCCAGAGCCGGACATCTGGCGCGGTTATTTGATCGCAA ACCAGAGGGAGTGAACCCCATGTTTAAAGTTCTGTTGGATGCCGGTGCACGTGTGGAGGTTGCGGATGAAGCAACCCAGC AACTGATCCAATCTTCTATTGATGCGCTGAAAACACGTGTCATAGATGCGGAAGAGGGTAAGGAGAAGGCTAAAGTCGCC AAAGATGAAGCGGAAAAGAAACGGGAAGAGGCTGAAGCCAAAGCTGACGCAAAAGATGAAGAGATCGCGCAATTAAAAGA AAAAGCTTCTGACGCTGCCATTGCGAAACGATTGTCAGATGTTATCACTGCCCGTGACTCTGCCATCAAGATAGCGGGTG TGGATTTCATTTGTGACTCTGTTGAACCGCTGAAAATTAAACGTTCAGCATTGGATATGGCCGGTATCAAATGTCGCAAA TACGCTTCGTGGGATAAGGCCCCTGATGCCTATGTATTGGCGTATTTCGATGCGGAAGAAGAGCGTCGGGAAAATGAAGA TGACGACGATCCTGATGATAAAGATGATGTTAATGACTCCATCATCAATTTGGGCCACGACATGACGAAAATCAAAATGG GTGATGCTCAGTCGGTCCGTAACAGTGTTCGCCAGACCTGGCTGGACAAACGTTATGGCAAACAACCGGAGGATAAATAA
Upstream 100 bases:
>100_bases ACAACGGAGAAACAGGGTTATTCCCCGGCAGAGCACATGTAGGGTGCCGCTGTCACGCGATACCCCAACTTAAAGATATT GATTACTAACAGGATTTATT
Downstream 100 bases:
>100_bases TGGCTATTGCGCAGAGTGACTTCACCCTGTGGCGCGACAAGGCATACGAAGGGCAAATTTCTACTACTGATATTTGCGAA GTGATATCCCGCCGCGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRITVRDRVSFPINSQREITAEGYLKVPGRVARVGVQQYLASELGLTDRPPGQIVNVYRPQEEVFSPASLASYDNADITI DHPDDLVNAQTFRQVTVGHVISPGRQDVEDADYVVVDLLIKDQYAIDEINQEKEELSAGYTSEYQHAPGIAPCGTAYEFI QRTITINHIALCDQARAGHLARLFDRKPEGVNPMFKVLLDAGARVEVADEATQQLIQSSIDALKTRVIDAEEGKEKAKVA KDEAEKKREEAEAKADAKDEEIAQLKEKASDAAIAKRLSDVITARDSAIKIAGVDFICDSVEPLKIKRSALDMAGIKCRK YASWDKAPDAYVLAYFDAEEERRENEDDDDPDDKDDVNDSIINLGHDMTKIKMGDAQSVRNSVRQTWLDKRYGKQPEDK
Sequences:
>Translated_399_residues MRITVRDRVSFPINSQREITAEGYLKVPGRVARVGVQQYLASELGLTDRPPGQIVNVYRPQEEVFSPASLASYDNADITI DHPDDLVNAQTFRQVTVGHVISPGRQDVEDADYVVVDLLIKDQYAIDEINQEKEELSAGYTSEYQHAPGIAPCGTAYEFI QRTITINHIALCDQARAGHLARLFDRKPEGVNPMFKVLLDAGARVEVADEATQQLIQSSIDALKTRVIDAEEGKEKAKVA KDEAEKKREEAEAKADAKDEEIAQLKEKASDAAIAKRLSDVITARDSAIKIAGVDFICDSVEPLKIKRSALDMAGIKCRK YASWDKAPDAYVLAYFDAEEERRENEDDDDPDDKDDVNDSIINLGHDMTKIKMGDAQSVRNSVRQTWLDKRYGKQPEDK >Mature_399_residues MRITVRDRVSFPINSQREITAEGYLKVPGRVARVGVQQYLASELGLTDRPPGQIVNVYRPQEEVFSPASLASYDNADITI DHPDDLVNAQTFRQVTVGHVISPGRQDVEDADYVVVDLLIKDQYAIDEINQEKEELSAGYTSEYQHAPGIAPCGTAYEFI QRTITINHIALCDQARAGHLARLFDRKPEGVNPMFKVLLDAGARVEVADEATQQLIQSSIDALKTRVIDAEEGKEKAKVA KDEAEKKREEAEAKADAKDEEIAQLKEKASDAAIAKRLSDVITARDSAIKIAGVDFICDSVEPLKIKRSALDMAGIKCRK YASWDKAPDAYVLAYFDAEEERRENEDDDDPDDKDDVNDSIINLGHDMTKIKMGDAQSVRNSVRQTWLDKRYGKQPEDK
Specific function: Unknown
COG id: COG3566
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019246 - InterPro: IPR016913 [H]
Pfam domain/function: PF09979 DUF2213 [H]
EC number: NA
Molecular weight: Translated: 44525; Mature: 44525
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITVRDRVSFPINSQREITAEGYLKVPGRVARVGVQQYLASELGLTDRPPGQIVNVYRP CEEEEECCCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC QEEVFSPASLASYDNADITIDHPDDLVNAQTFRQVTVGHVISPGRQDVEDADYVVVDLLI HHHHCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHH KDQYAIDEINQEKEELSAGYTSEYQHAPGIAPCGTAYEFIQRTITINHIALCDQARAGHL HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH ARLFDRKPEGVNPMFKVLLDAGARVEVADEATQQLIQSSIDALKTRVIDAEEGKEKAKVA HHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KDEAEKKREEAEAKADAKDEEIAQLKEKASDAAIAKRLSDVITARDSAIKIAGVDFICDS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCC VEPLKIKRSALDMAGIKCRKYASWDKAPDAYVLAYFDAEEERRENEDDDDPDDKDDVNDS CCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCHHHHHHH IINLGHDMTKIKMGDAQSVRNSVRQTWLDKRYGKQPEDK HHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRITVRDRVSFPINSQREITAEGYLKVPGRVARVGVQQYLASELGLTDRPPGQIVNVYRP CEEEEECCCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC QEEVFSPASLASYDNADITIDHPDDLVNAQTFRQVTVGHVISPGRQDVEDADYVVVDLLI HHHHCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHH KDQYAIDEINQEKEELSAGYTSEYQHAPGIAPCGTAYEFIQRTITINHIALCDQARAGHL HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH ARLFDRKPEGVNPMFKVLLDAGARVEVADEATQQLIQSSIDALKTRVIDAEEGKEKAKVA HHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KDEAEKKREEAEAKADAKDEEIAQLKEKASDAAIAKRLSDVITARDSAIKIAGVDFICDS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCC VEPLKIKRSALDMAGIKCRKYASWDKAPDAYVLAYFDAEEERRENEDDDDPDDKDDVNDS CCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCHHHHHHH IINLGHDMTKIKMGDAQSVRNSVRQTWLDKRYGKQPEDK HHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]