| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949327
Identifier: 153949327
GI number: 153949327
Start: 2534460
End: 2534879
Strand: Reverse
Name: 153949327
Synonym: YpsIP31758_2220
Alternate gene names: NA
Gene position: 2534879-2534460 (Counterclockwise)
Preceding gene: 153950839
Following gene: 153947877
Centisome position: 53.67
GC content: 51.43
Gene sequence:
>420_bases ATGTTCGGTAATGGTCTGGATATGCATGGGCATATTGATGCCACCTTTAATTCGCCTATTGAGGGTGGCATCCGGTTGAT TCGACCGACTGCCGGTGACTATCGCGGCCCCGGTGGGATTTGGCTGCAGGGCGAACCACAGGTCACCGAATTGCAAAAAG TGAATGTTCAGTCGGTAAAATGGAAAGATATTCAGATGCTCATCGGCATGGGAGGCACTGCAAATCCACAAGATCTCCGG GTGGTATACATCAACGATGGTGTGAATTATCTGTGGCCCGATGACGAGGGGAGGTTTAGTGATTTGCTGGAATTCAGTGA CGGGTTGGCAATACGGCAATGGCGGGTCATTTCCTGCGATAACCGGCCTTGGCGCAATTTTTGCCGTGCACTGGTTGAAC GCTATCGAGGTACAGGCTGA
Upstream 100 bases:
>100_bases GCAATGCTGACGCAACCATTGCCGCCAAGGGATCCGCAACGCCACTGATTAACCACGGTATGTTAAAGGGCGTAATTACT CACATTGTGGAGGATTAATC
Downstream 100 bases:
>100_bases TGGAAACTATTGAAGAGATGTATCCGATATTTCAGCAATTGATTTCTCTGGCCACCAAGATCCCTCTCGACCGTGTTGTC TTAGCCGACCAGGGCCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MFGNGLDMHGHIDATFNSPIEGGIRLIRPTAGDYRGPGGIWLQGEPQVTELQKVNVQSVKWKDIQMLIGMGGTANPQDLR VVYINDGVNYLWPDDEGRFSDLLEFSDGLAIRQWRVISCDNRPWRNFCRALVERYRGTG
Sequences:
>Translated_139_residues MFGNGLDMHGHIDATFNSPIEGGIRLIRPTAGDYRGPGGIWLQGEPQVTELQKVNVQSVKWKDIQMLIGMGGTANPQDLR VVYINDGVNYLWPDDEGRFSDLLEFSDGLAIRQWRVISCDNRPWRNFCRALVERYRGTG >Mature_139_residues MFGNGLDMHGHIDATFNSPIEGGIRLIRPTAGDYRGPGGIWLQGEPQVTELQKVNVQSVKWKDIQMLIGMGGTANPQDLR VVYINDGVNYLWPDDEGRFSDLLEFSDGLAIRQWRVISCDNRPWRNFCRALVERYRGTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15724; Mature: 15724
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGNGLDMHGHIDATFNSPIEGGIRLIRPTAGDYRGPGGIWLQGEPQVTELQKVNVQSVK CCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCHHHHHCCCCCCC WKDIQMLIGMGGTANPQDLRVVYINDGVNYLWPDDEGRFSDLLEFSDGLAIRQWRVISCD CCEEEEEEECCCCCCCCCEEEEEEECCCEEECCCCCCHHHHHHHHCCCEEEEEEEEEECC NRPWRNFCRALVERYRGTG CCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MFGNGLDMHGHIDATFNSPIEGGIRLIRPTAGDYRGPGGIWLQGEPQVTELQKVNVQSVK CCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCHHHHHCCCCCCC WKDIQMLIGMGGTANPQDLRVVYINDGVNYLWPDDEGRFSDLLEFSDGLAIRQWRVISCD CCEEEEEEECCCCCCCCCEEEEEEECCCEEECCCCCCHHHHHHHHCCCEEEEEEEEEECC NRPWRNFCRALVERYRGTG CCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA