| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948168
Identifier: 153948168
GI number: 153948168
Start: 2308256
End: 2308996
Strand: Direct
Name: 153948168
Synonym: YpsIP31758_2003
Alternate gene names: NA
Gene position: 2308256-2308996 (Clockwise)
Preceding gene: 153946999
Following gene: 153947823
Centisome position: 48.87
GC content: 51.69
Gene sequence:
>741_bases ATGGACCAACAAAACACTCACATTGGCATACTTGCCGGGAACTCCCGTGTTTATCTTGATAATAACGGCATGGTTGCCAT TGAGGCTCAATTAAATGCCTTTGATGCAGCACTGCGGCTCGCCCGACAATCCCTGGATAGTGGAAATTTGCTGCCGAAGT TGTCCGTAGCGTTCGATCACCTCGGTATTTTTCGCCTTCAGTTTCTGACAGAAAACCTTTCTAACGCCCAAAAACGCCGC CCGCGCCTAAGCCATCTCCATCCGTTAATCCAGCAGGTTTTTCTGCCTATTGCGGAAAAGTATCAGATAGATCTCAGTGA TATCCGCGCGATCCACGAAGATTCAGCCCGACAGCACCTTGTCCATATCCTCGCGACCCAAGATATTCCTGAAAGGCTCA CCCGCAGGATGCTAACCGGAGCAGCCTCACGACCAAACGGTGATACGCATAATGAGACGCCAACACAAAAGCTCACCTGT GCGGCTATCACCAAAGAGTATTTTGAACGGGCAGCGAGCGACCATCAGGATCCGCAAGCGGTTCTGGAAGTGTTCTTTGA AAATAGCCCTTGGTCCAGAAGCCTGGCCTATGTTCGCGGGCTCCAGCTCAGCCACTTGCTAGGTGTCCCAGCCGCCATTC GCCTTAATCTGGTCAATGAGGCCGGTGAAGTCAGTCGGGGGGAGAAAATAATCGCTCAATTCACCTCTGCCCCAAAAAAG CCGTTGTCGTCTCGCTCATGA
Upstream 100 bases:
>100_bases GCTGAAAGGAAAGTAAATATTTTCAATTCGTATAAACAAGACGAAATTCTCATTTTTGTATAAAGAAAAATACGTCATCA CTCAAAGGAAACTGAGAAAC
Downstream 100 bases:
>100_bases TTAAGGAAAAATCATTATGTACAGTCAGAACCCACCGATATATCTCGATAATAACGCGACAACGGCACTAGACCCTGCCG TCCTGCAGGCGATGATGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDHLGIFRLQFLTENLSNAQKRR PRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHLVHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTC AAITKEYFERAASDHQDPQAVLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK PLSSRS
Sequences:
>Translated_246_residues MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDHLGIFRLQFLTENLSNAQKRR PRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHLVHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTC AAITKEYFERAASDHQDPQAVLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK PLSSRS >Mature_246_residues MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDHLGIFRLQFLTENLSNAQKRR PRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHLVHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTC AAITKEYFERAASDHQDPQAVLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK PLSSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27453; Mature: 27453
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDH CCCCCCEEEEEECCCEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LGIFRLQFLTENLSNAQKRRPRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTCAAITKEYFERAASDHQDPQA HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH VLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK HHHHHHCCCCCHHHHHHHHCCHHHHHHCCCHHEEEEEHHCCCCHHHHHHHHHHHHCCCCC PLSSRS CCCCCC >Mature Secondary Structure MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDH CCCCCCEEEEEECCCEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LGIFRLQFLTENLSNAQKRRPRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTCAAITKEYFERAASDHQDPQA HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH VLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK HHHHHHCCCCCHHHHHHHHCCHHHHHHCCCHHEEEEEHHCCCCHHHHHHHHHHHHCCCCC PLSSRS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA